FFCP PHASE1:Hg19::chr19:14530112..14530140,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:14530112..14530140,- to FFCP PHASE1:Hg19::chr19:14530112..14530140,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10212 | |EntrezGene=10212 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17821 | |HGNC=17821 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N5M0 | |UniProt=Q8N5M0 | ||
|association_with_transcript=0bp_to_ENST00000324340_5end | |||
|cluster_id=chr19:14530112..14530140,- | |||
|description=CAGE_peak_2_at_DDX39A_5end | |||
|id=chr19:14530112..14530140,- | |||
|ontology_enrichment_celltype=CL:0000988!5.02e-37!182;CL:0000037!6.50e-35!172;CL:0000566!6.50e-35!172;CL:0000003!1.78e-34!722;CL:0002032!8.50e-33!165;CL:0000837!8.50e-33!165;CL:0000012!2.22e-32!682;CL:0000548!1.94e-30!679;CL:0000004!1.94e-30!679;CL:0000255!1.94e-30!679;CL:0000063!2.06e-27!578;CL:0000219!3.42e-26!390;CL:0000144!5.62e-26!625;CL:0000738!8.92e-24!140;CL:0002031!1.29e-23!124;CL:0002371!1.35e-23!591;CL:0002087!1.76e-22!119;CL:0000134!7.93e-22!358;CL:0000034!1.34e-20!444;CL:0002320!4.52e-20!365;CL:0000723!4.15e-19!436;CL:0000048!1.04e-18!430;CL:0000542!3.84e-17!53;CL:0000051!3.84e-17!53;CL:0000838!1.31e-16!52;CL:0000763!8.55e-16!112;CL:0000049!8.55e-16!112;CL:0000860!3.18e-09!45;CL:0002057!1.04e-08!42;CL:0000084!1.46e-08!25;CL:0000827!1.46e-08!25;CL:0000557!3.27e-08!71;CL:0000839!6.09e-08!70;CL:0000945!1.41e-07!24;CL:0000826!1.41e-07!24;CL:0002009!2.79e-07!65;CL:0000115!3.42e-07!35;CL:0000766!4.83e-07!76 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.56e-10;53!CL:0000084;1.41e-08;25!CL:0002087;2.44e-08;104!CL:0000945;1.23e-07;24!CL:0000860;1.34e-07;33!CL:0002057;1.34e-07;33!CL:0000988;7.49e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,8.01e-37,177;CL:0000037,3.95e-35,168;CL:0002032,5.15e-33,161;CL:0000837,5.15e-33,161;CL:0000219,4.30e-25,386;CL:0000738,5.83e-24,136;CL:0002031,7.26e-24,120;CL:0002087,9.88e-23,115;CL:0000134,7.68e-21,354;CL:0000034,2.67e-19,441;CL:0002320,4.00e-19,361;CL:0000723,7.28e-18,433;CL:0000048,1.76e-17,427;CL:0000542,3.84e-17,53;CL:0000051,3.84e-17,53;CL:0000838,1.31e-16,52;CL:0000763,6.15e-16,108;CL:0000049,6.15e-16,108;CL:0000860,1.04e-08,42;CL:0002057,1.04e-08,42;CL:0000084,1.46e-08,25;CL:0000827,1.46e-08,25;CL:0000557,2.61e-08,67;CL:0000839,4.92e-08,66;CL:0000473,9.22e-08,48;CL:0000234,9.22e-08,48;CL:0000945,1.41e-07,24;CL:0000826,1.41e-07,24;CL:0000115,1.68e-07,36;CL:0002009,2.28e-07,61;CL:0000766,4.35e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000051;1.56e-10;53!CL:0002057;4.69e-07;42 | |||
|ontology_enrichment_disease=DOID:2531!4.32e-17!51;DOID:0060083!4.32e-17!51;DOID:1240!1.02e-14!39;DOID:8692!2.53e-10!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.11e-11;39!DOID:2531;1.30e-10;51!DOID:0060083;1.30e-10;51!DOID:8692;5.07e-10;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.32e-17,51;DOID:0060083,4.32e-17,51;DOID:1240,1.02e-14,39;DOID:8692,2.53e-10,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!5.74e-19!375;UBERON:0002193!3.03e-10!112;UBERON:0002390!1.65e-09!102;UBERON:0003061!1.65e-09!102;UBERON:0001474!4.76e-08!86;UBERON:0002371!5.46e-08!80;UBERON:0002405!4.22e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.82e-18,371;UBERON:0002193,2.74e-10,108;UBERON:0002405,3.25e-10,93;UBERON:0002390,1.47e-09,98;UBERON:0003061,1.47e-09,98;UBERON:0001474,4.27e-08,82;UBERON:0002371,4.74e-08,76 | |||
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| ||
|short_description=p2@DDX39A | |||
}} | }} |
Latest revision as of 04:48, 16 September 2015
Short description: | p2@DDX39A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_DDX39A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000324340_5end |
EntrezGene: | DDX39A |
HGNC: | 17821 |
UniProt: | Q8N5M0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.82e-18 | 371 |
hemolymphoid system | 2.74e-10 | 108 |
immune system | 3.25e-10 | 93 |
hematopoietic system | 1.47e-09 | 98 |
blood island | 1.47e-09 | 98 |
bone element | 4.27e-08 | 82 |
bone marrow | 4.74e-08 | 76 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.32e-17 | 51 |
immune system cancer | 4.32e-17 | 51 |
leukemia | 1.02e-14 | 39 |
myeloid leukemia | 2.53e-10 | 31 |