FFCP PHASE1:Hg19::chr19:13054647..13054681,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:13054647..13054681,- to FFCP PHASE1:Hg19::chr19:13054647..13054681,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=811 | |EntrezGene=811 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1455 | |HGNC=1455 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=96bp_to_BC107102_5end | |||
|cluster_id=chr19:13054647..13054681,- | |||
|coexpression_cluster_id=C1059 | |||
|description=CAGE_peak_9_at_CALR_5end | |||
|id=chr19:13054647..13054681,- | |||
|ontology_enrichment_celltype=CL:0000548!2.15e-15!679;CL:0000004!2.15e-15!679;CL:0000255!2.15e-15!679;CL:0000012!1.11e-14!682;CL:0000055!7.89e-13!180;CL:0000144!1.33e-11!625;CL:0002371!8.69e-11!591;CL:0000220!5.70e-08!246;CL:0002321!6.02e-08!248;CL:0000003!1.16e-07!722;CL:0000057!3.38e-07!75;CL:0000222!9.60e-07!119 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,4.47e-08,250;CL:0000057,3.35e-07,76;CL:0000222,4.75e-07,121 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!5.24e-08!143 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,1.09e-07,160;UBERON:0009142,1.09e-07,160;UBERON:0005256,4.76e-07,122 | |||
|phase1_expression=3.63356758541113,3.63970890614671,4.93340414335899,15.0109947529696,4.02264984984559,14.8297549097063,2.53299878168311,7.58063848112197,2.35067065379855,2.21160542851358,4.18680700783456,3.05817920982241,3.9565046734268,6.55961670688247,3.64537113300707,9.41255205032485,6.62963980826375,5.84248072309899,11.7103871709722,5.90981078768582,5.30401797235058,6.89600387251793,4.29353980696585,2.05311637609326,2.25976751270645,1.14620108621927,1.64201178899891,1.02324015707783,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.369754010166788,1.16200800870452,1.70603078984906,2.64240395401362,0,0.401088894940283,1.30206522429511,0.895661896959697,0.971680998056939,0.257575567634187,1.30858414901608,0.755751887377619,0.242584061187816,0.697287110717054,0,0.309706370895104,1.1507695692886,0.768482119587302,0,0,0,0,1.50593871634084,0.545812300115692,0.674170453335254,1.22433556948361,0,0,0.989553900560148,0.199463657621632,0.426224750532694,0.580418477257168,0,0,1.00499466102697,0.521482918420201,0.217188844705117,1.21079900526674,0,0,0.422510572623884,0.850417199860174,1.04829322754188,0.786300418025466,0.750884464207532,0,0.285012743741249,0.19891667719909,1.27864907635244,0,0,0.889509253863555,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0.382273228125229,0,0,1.58030450865046,0.590129310341499,1.17903228824749,0.822405995998037,0.334372990781356,0,0,0,0.668462741311041,0.589211814949674,0.664601683750863,1.35401931882508,2.17755243533648,3.25148368899696,2.95988228286617,4.14525026678773,1.15921234294021,0.593146252648242,0,0,1.47302145506836,0,0,1.01207876807801,0,0.651083453856419,0,0.150575119077773,0.255973222308837,0,0.473554504088034,0,0.403213486449465,3.20928234940209,0.868946423296794,2.43806866313962,13.4140171940727,2.42938867502708,29.999449647919,0.50133791063589,7.24232594804119,0,5.83961844363163,3.21418378357831,4.87804674417641,3.07421749925941,0.72038491523742,1.82147644146271,1.48313777113772,2.59637914923747,2.08955684759121,2.79211717089617,1.19245312152671,0,0,0.198762407366705,0,2.77712401286075,1.69592382577203,4.19499436209906,3.02629846134074,0.626984899610432,3.35941786920128,2.13459757612026,2.34304428935269,9.26507429351038,1.52054421143703,1.95249646038536,11.7652185710678,8.1014194788176,6.25098097988558,1.34717623575702,0.675668882899933,1.53316637465883,0,1.28241220751285,0,0,1.74437620857014,9.44246708221105,5.95163404823525,2.91300197789081,18.0707071071753,4.25602058638028,3.92474320099615,1.06748995729705,3.45334567784024,0.933633106199299,4.58016285036939,11.4423332179421,5.2975099675726,13.25204626304,0.70296429550139,3.74592092196385,0.570471821544449,2.83952493048422,5.87172493218824,5.82742599725274,11.3765153428821,0.816616685019573,4.05353247128834,0.826606249406124,1.18800285728205,3.4617370098998,0,0.718618141816238,4.04006673489759,1.37630371859161,0,1.75591048352335,8.27517048657353,0.901428353439581,8.96114246964166,21.8855355540412,5.33893472046419,5.72216133130817,24.0072876867522,1.44273540933814,12.3667459221902,3.7223371266318,6.75105328965065,3.21542117031955,13.6314238091822,1.38074847963449,0.161646056818812,25.2056810686796,3.52632343796741,5.4259389539356,1.15956511897978,0.818238361772504,0.286804595389004,1.21973706129595,2.51806559810822,2.5562667431294,0.932949495138334,1.51392510525377,3.6497735907583,0,9.00537313470039,1.38134921352481,3.71494342425583,7.21879481669586,7.33502160247032,3.87744787179634,3.61516544825223,9.92645754591546,2.39667388501647,4.50814176311084,4.44943316928543,5.69042248863504,3.46272441251751,7.38155454624648,15.426595118379,2.8810180793198,4.41026134156626,7.60530208930985,8.84544495009863,9.45263850690247,2.6487785964879,5.04252598026766,6.51957679134397,1.97550513735526,1.1240175325762,5.5290934826397,2.22212268380471,1.62904152655162,2.07986957055916,2.88662684050547,2.55046890945169,0.939269553886573,4.33099343283221,5.09284063834272,4.94660795809955,0.790204397959275,0,2.70838706696137,1.63802985597466,2.82399208348584,0,3.86358894857377,3.1190521393325,2.95543124919399,1.45316969256981,1.53353071666084,0,0.616339038092582,0.207328115540772,0.288239906833923,0,1.96843472305724,1.90994212779139,0,1.71072446022705,3.80461723002297,5.1058319833466,1.71495859578347,0.784917590417525,1.30788020649984,2.4935017179123,2.06834745212444,3.57656445851882,6.762422020448,6.38251479803689,8.32059495290929,5.91576960802927,7.09245660116391,6.66055447540248,4.57529579706072,0.542621605391443,6.58592269424615,6.18898750158097,3.55391948742546,13.4631818398683,6.93310567237048,0,1.89948683245908,1.2162378064119,1.50677127429638,2.10833939483032,5.5113716763064,2.29723871668228,0,6.80472141337622,4.10952645100767,1.96967059563885,2.01753259188349,1.77327684181734,2.15627574859517,1.92514554419623,0.508189248444927,0,9.27946575333234,0.502548796003046,16.5864075429822,0,0,0.414415513436035,4.78496817704646,4.50153468953709,10.30807090059,8.52680532276309,14.2743191037729,8.2005255817646,2.5771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| ||
|short_description=p9@CALR | |||
}} | }} |
Latest revision as of 22:35, 15 September 2015
Short description: | p9@CALR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CALR_5end |
Coexpression cluster: | C1059_Fibroblast_Adipocyte_Smooth_Chondrocyte_neuroectodermal_Hair_Preadipocyte |
Association with transcript: | 96bp_to_BC107102_5end |
EntrezGene: | CALR |
HGNC: | 1455 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 4.47e-08 | 250 |
fibroblast | 3.35e-07 | 76 |
mesodermal cell | 4.75e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 1.09e-07 | 160 |
entire embryonic mesenchyme | 1.09e-07 | 160 |
trunk mesenchyme | 4.76e-07 | 122 |