FFCP PHASE1:Hg19::chr19:11223682..11223689,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:11223682..11223689,+ to FFCP PHASE1:Hg19::chr19:11223682..11223689,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3949 | |EntrezGene=3949 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6547 | |HGNC=6547 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-357bp_to_ENST00000559340_5end | |||
|cluster_id=chr19:11223682..11223689,+ | |||
|description=CAGE_peak_7_at_LDLR_5end | |||
|id=chr19:11223682..11223689,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.26e-24!235;DOID:14566!1.28e-23!239;DOID:0050687!4.95e-18!143;DOID:305!8.50e-17!106;DOID:0050686!2.00e-15!137 | |||
|ontology_enrichment_disease_v019=DOID:299;2.68e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,5.19e-19,239;DOID:162,7.35e-19,235;DOID:305,6.98e-16,106;DOID:0050687,2.14e-14,143;DOID:0050686,1.34e-13,137;DOID:299,1.97e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.34e-07!155;UBERON:0001555!1.34e-07!155;UBERON:0007026!1.34e-07!155;UBERON:0004119!3.81e-07!169;UBERON:0000925!3.81e-07!169;UBERON:0006595!3.81e-07!169 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p7@LDLR | |||
}} | }} |
Latest revision as of 04:23, 25 September 2015
Short description: | p7@LDLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_LDLR_5end |
Coexpression cluster: | NA |
Association with transcript: | -357bp_to_ENST00000559340_5end |
EntrezGene: | LDLR |
HGNC: | 6547 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 5.19e-19 | 239 |
cancer | 7.35e-19 | 235 |
carcinoma | 6.98e-16 | 106 |
cell type cancer | 2.14e-14 | 143 |
organ system cancer | 1.34e-13 | 137 |
adenocarcinoma | 1.97e-07 | 25 |