FFCP PHASE1:Hg19::chr19:1067492..1067501,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23526 | |EntrezGene=23526 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17102 | |HGNC=17102 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_ENST00000412039_5end | |||
|cluster_id=chr19:1067492..1067501,+ | |||
|description=CAGE_peak_15_at_HMHA1_5end | |||
|id=chr19:1067492..1067501,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.71e-45!182;CL:0000037!1.03e-44!172;CL:0000566!1.03e-44!172;CL:0000738!2.82e-44!140;CL:0002032!9.39e-38!165;CL:0000837!9.39e-38!165;CL:0002087!8.45e-31!119;CL:0002031!3.98e-30!124;CL:0000838!2.33e-25!52;CL:0000542!1.14e-24!53;CL:0000051!1.14e-24!53;CL:0000763!5.77e-15!112;CL:0000049!5.77e-15!112;CL:0000084!8.71e-15!25;CL:0000827!8.71e-15!25;CL:0000791!6.47e-13!18;CL:0000789!6.47e-13!18;CL:0002420!6.47e-13!18;CL:0002419!6.47e-13!18;CL:0000790!6.47e-13!18;CL:0000766!2.52e-11!76;CL:0000080!6.58e-10!6;CL:0000134!1.03e-09!358;CL:0000557!1.04e-09!71;CL:0002320!3.96e-09!365;CL:0000945!6.98e-09!24;CL:0000826!6.98e-09!24;CL:0000451!1.24e-08!10;CL:0000839!4.72e-08!70;CL:0002009!1.58e-07!65;CL:0000219!1.76e-07!390;CL:0002194!4.42e-07!63;CL:0000576!4.42e-07!63;CL:0000040!4.42e-07!63;CL:0000559!4.42e-07!63;CL:0000624!4.43e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000453;6.21e-17;5!CL:0000791;8.12e-12;18!CL:0000789;8.12e-12;18!CL:0002419;8.12e-12;18!CL:0002032;6.05e-10;1!CL:0000557;6.05e-10;1!CL:0000990;1.21e-09;8!CL:0000084;1.82e-08;25!CL:0000451;5.66e-08;10!CL:0000081;8.52e-08;11!CL:0000625;1.38e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,6.22e-17,5;CL:0000988,7.12e-13,177;CL:0002032,1.15e-12,161;CL:0000837,1.15e-12,161;CL:0000037,5.11e-12,168;CL:0000791,6.84e-12,18;CL:0000789,6.84e-12,18;CL:0002420,6.84e-12,18;CL:0002419,6.84e-12,18;CL:0000790,6.84e-12,18;CL:0000738,4.42e-10,136;CL:0000990,1.21e-09,8;CL:0000084,1.61e-08,25;CL:0000827,1.61e-08,25;CL:0000451,5.66e-08,10;CL:0000763,6.04e-08,108;CL:0000049,6.04e-08,108;CL:0000081,8.43e-08,11;CL:0000625,1.57e-07,11;CL:0000624,8.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000790;8.12e-12;18 | |||
|ontology_enrichment_disease=DOID:0060058!2.50e-10!10;DOID:2531!6.69e-08!51;DOID:0060083!6.69e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:630;6.05e-10;1!DOID:0050177;6.05e-10;1!DOID:0050427;6.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,4.85e-10,1;DOID:0050177,4.85e-10,1;DOID:0050427,4.85e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!7.15e-22!102;UBERON:0003061!7.15e-22!102;UBERON:0002193!1.08e-20!112;UBERON:0000178!7.74e-14!15;UBERON:0000179!7.74e-14!15;UBERON:0000463!7.74e-14!15;UBERON:0002371!2.89e-09!80;UBERON:0002405!3.36e-09!115;UBERON:0002384!9.69e-09!375;UBERON:0001474!4.44e-08!86;UBERON:0004177!6.96e-07!7 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p15@HMHA1 | |||
}} | }} |
Latest revision as of 02:06, 25 September 2015
Short description: | p15@HMHA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_HMHA1_5end |
Coexpression cluster: | NA |
Association with transcript: | -100bp_to_ENST00000412039_5end |
EntrezGene: | HMHA1 |
HGNC: | 17102 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 6.22e-17 | 5 |
hematopoietic cell | 7.12e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.15e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.15e-12 | 161 |
hematopoietic stem cell | 5.11e-12 | 168 |
mature alpha-beta T cell | 6.84e-12 | 18 |
alpha-beta T cell | 6.84e-12 | 18 |
immature T cell | 6.84e-12 | 18 |
mature T cell | 6.84e-12 | 18 |
immature alpha-beta T cell | 6.84e-12 | 18 |
leukocyte | 4.42e-10 | 136 |
conventional dendritic cell | 1.21e-09 | 8 |
T cell | 1.61e-08 | 25 |
pro-T cell | 1.61e-08 | 25 |
dendritic cell | 5.66e-08 | 10 |
myeloid cell | 6.04e-08 | 108 |
common myeloid progenitor | 6.04e-08 | 108 |
blood cell | 8.43e-08 | 11 |
CD8-positive, alpha-beta T cell | 1.57e-07 | 11 |
CD4-positive, alpha-beta T cell | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 4.85e-10 | 1 |
monogenic disease | 4.85e-10 | 1 |
xeroderma pigmentosum | 4.85e-10 | 1 |