FFCP PHASE1:Hg19::chr18:74844048..74844062,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:74844048..74844062,- to FFCP PHASE1:Hg19::chr18:74844048..74844062,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4155 | |EntrezGene=4155 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6925 | |HGNC=6925 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-408bp_to_ENST00000397863_5end | |||
|cluster_id=chr18:74844048..74844062,- | |||
|coexpression_cluster_id=C1446 | |||
|description=CAGE_peak_16_at_MBP_5end | |||
|id=chr18:74844048..74844062,- | |||
|ontology_enrichment_celltype=CL:0000766!6.06e-37!76;CL:0000557!3.17e-35!71;CL:0000839!4.82e-35!70;CL:0000763!1.72e-33!112;CL:0000049!1.72e-33!112;CL:0002194!2.07e-33!63;CL:0000576!2.07e-33!63;CL:0000040!2.07e-33!63;CL:0000559!2.07e-33!63;CL:0002009!5.12e-33!65;CL:0002057!1.16e-30!42;CL:0000037!2.92e-29!172;CL:0000566!2.92e-29!172;CL:0000860!3.34e-29!45;CL:0000988!4.17e-28!182;CL:0002032!3.97e-27!165;CL:0000837!3.97e-27!165;CL:0000738!5.73e-27!140;CL:0002031!4.96e-25!124;CL:0002087!5.64e-24!119;CL:0000219!6.30e-08!390;CL:0002393!1.02e-07!9;CL:0002397!1.02e-07!9;CL:0000134!1.07e-07!358;CL:0002320!7.89e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.44e-47;33!CL:0002057;5.44e-47;33!CL:0000576;1.01e-45;48!CL:0000473;7.70e-39;39!CL:0000234;7.70e-39;39!CL:0000766;2.12e-36;69!CL:0000763;1.78e-17;100!CL:0002087;1.05e-13;104!CL:0000738;2.21e-12;136!CL:0002393;2.20e-10;6!CL:0002397;2.20e-10;6!CL:0000988;1.47e-07;177!CL:0000148;2.54e-07;10!CL:0000094;9.62e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.38e-77,72;CL:0000557,4.63e-72,67;CL:0000839,4.03e-68,66;CL:0000860,3.13e-66,42;CL:0002057,3.13e-66,42;CL:0002009,3.13e-66,61;CL:0002194,3.87e-66,59;CL:0000576,3.87e-66,59;CL:0000040,3.87e-66,59;CL:0000559,3.87e-66,59;CL:0000473,1.24e-64,48;CL:0000234,1.24e-64,48;CL:0000763,1.01e-56,108;CL:0000049,1.01e-56,108;CL:0000738,2.05e-49,136;CL:0000037,3.41e-43,168;CL:0002031,1.29e-41,120;CL:0000988,5.98e-41,177;CL:0002032,1.29e-40,161;CL:0000837,1.29e-40,161;CL:0002087,2.43e-40,115;CL:0000219,2.50e-17,386;CL:0000134,2.61e-16,354;CL:0002320,1.64e-15,361;CL:0002393,3.61e-15,9;CL:0002397,3.61e-15,9;CL:0000048,8.38e-12,427;CL:0000723,2.70e-11,433;CL:0000034,4.18e-11,441;CL:0000148,2.61e-07,10;CL:0000541,2.61e-07,10;CL:0000094,5.52e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.83e-47;42!CL:0000049;7.18e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.36e-32!102;UBERON:0003061!3.36e-32!102;UBERON:0002193!8.14e-30!112;UBERON:0002371!2.58e-28!80;UBERON:0001474!6.60e-25!86;UBERON:0002405!1.20e-22!115;UBERON:0004765!2.61e-17!101;UBERON:0001434!2.61e-17!101;UBERON:0003081!1.96e-11!216;UBERON:0002204!3.39e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.18e-64,98;UBERON:0003061,1.18e-64,98;UBERON:0002371,2.76e-61,76;UBERON:0002193,1.22e-56,108;UBERON:0001474,2.06e-55,82;UBERON:0002405,2.60e-50,93;UBERON:0004765,8.36e-49,90;UBERON:0001434,4.87e-42,100;UBERON:0003081,2.72e-26,203;UBERON:0002204,3.15e-23,167;UBERON:0000926,1.78e-14,315;UBERON:0004120,1.78e-14,315;UBERON:0006603,1.78e-14,315;UBERON:0002384,1.99e-14,371;UBERON:0000178,9.10e-07,15;UBERON:0000179,9.10e-07,15;UBERON:0000463,9.10e-07,15 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0.872338524100369,0,0,0,0,0,0.655324116390517,0.263766978228454,0,0,0,0,0,0,0.246242116153576,0.612002073732759,0,0.286235987131057,0.958120975510189,0.502170558379211,0.534893840235659,0.328402357799783,0.472264687882075,2.75354993794233,1.91914699048606,5.26374819274658,0,0.6024118375565,0,0.154934401160603,0.426507697462265,0.880801318004542,7.75593571944628,1.80490002723128,5.4252717678963,1.79132379391939,3.56283032620878,2.06060454107349,4.21654892460738,3.40088349319928,3.63876091781724,3.48643555358527,5.75635043230556,10.5300166104335,7.76769459269806,8.19714260893122,11.1146648047635,8.61864201841546,11.6187243045089,16.251178391321,5.27078550719293,3.82068610080984,4.04502272001152,5.81559395504715,2.56743221660875,8.95071976118658,3.29851300186716,6.58230070151385,5.54092175692502,3.19230162491442,1.70215567407342,1.86846674698672,16.0799145764316,7.82224377630302,18.0266741105247,3.02699751316684,4.78760926783834,5.37986058649504,4.43636101255078,5.74031609905618,6.70907665626803,6.17807471305723,2.70318407114711,2.4108838004562,7.69534408101371,4.77400025277816,5.47992461293902,1.75996244461323,1.09227722252426,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0.587237189370939,0,0,1.12101712596307,0.263384084775077,0,0,0.205601498999509,0,0.651844533267181,0,0,0.334231370655521,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.226618685395132,0,0.34362744548263,0,0,0,0,0.301150238155546,0,0,0.236777252044017,1.64225599384209,0.403213486449465,0,0.144824403882799,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.472674085820339,0.221729397462564,0.614843499851882,0.392937226493138,0,0,0.97364218096405,0.174129737299267,0.26591592103773,2.14641561874808,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0.24406205754817,0,0,0,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0.662045904066094,1.14734648299525,0.709336764396714,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0.490385709340376,1.05950199351452,1.15235184896,0.468642863667593,0.624320153660641,0,0,0.23486899728753,0.161872944368132,0,0,0,0.206651562351531,0,0.247266929278557,0.910161361938026,0.718618141816238,0,0,0,0.438977620880838,0,0.150238058906597,0.226864366320042,0,0,0.211931901159562,0,0.206105058476878,0,0,0,0,0,0.0920498986422993,1.61646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0,0.168584690078102,0,0,0,0,0.539325232640658,0,0,1.4763109092493,1.40241773803446,0.8231480226628,0,0,0,1.18157981336281,0,0,0.171567810298526,0,0,0.100528972411631,0.185176890317059,1.95484983186195,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,0.738651018262192,1.17002132569619,0.743155811443641,0,0,0,0.0895585227028483,0,0.383382679165211,0,1.32072651019839,12.8543431635279,2.45003920808834,21.3349712490582,1.26995788584338,2.29193055334967,8.20522130470329,6.84289784090821,2.57068731758309,2.70308752059526,2.00078502841405,0.112131084345361,0,0,0.129271715757778,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,3.64871341923571,2.00902836572851,0,0.239624855491583,1.14861935834114,0,0,0,0,2.24170287987055,1.18218456121156,1.07813787429759,1.41177339907723,0,0,0,0.167516265334349,0,1.49801404789436,2.99161459204025,5.38740167466846,0.12269149171914,0,0,0,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,1.03384013061444,2.15714200818617,1.921096040462,0.606255142892519,0,0.30239029332968,0,0.306923946576125,0,0,0,0.482561763430822,1.48418066444991,0,0,0.164254312027618,0,0,0,0,0.184161977871793,0,0.182091168006717,0,0.451199612907412,0.0770153371044148,0.784349769176855,0,0.105551628892876,0,0.170093705276516,0,0,0.270946437543853,0,0.254876273045038,0.831076008928724,0.223874754722178,0.438519753291869,0.261435451024901,1.02580050046556,0.328014645699706,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0,0.460511024178389,0.137836572484531,0,0,0.255679882248303,0,0,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,1.58189712359363,1.5250415513906,0.511795582622668,0,0,0,0.359744915166629,1.09814811894422,0.706874414074119,0,1.58510321173008,0,0.48763373908959,0.487426979262569,1.05650146756755,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,0,0,0.75894634753143,2.0996083214699,0.0962221127255121,0,0,0.470719003883896,0.43050537267123,0,0,0,1.52234282769651,3.82318603571188,2.27858874869665,0.238231775457789,0.411362273086194,1.94541993357815,2.70015718619057,0.79312517629427,0,0,0,0,0,0,0,0.199579371432817,0.766021480529467,1.69338866179106,0,0.561594356226918,2.51058146936511,0.626719583092093,0,1.18504244461122,0.642352300414798,0.80719882876419,0,0.687010689511529,1.84344458585075,2.01308497103174,1.33479313369527,0.976940477010201,0.278406173895242,0,0.540911356951966,0.33307196799782,0,0.37428108081644,0.439524537815682,0,0.557216921387392,0.852408440419239,0.47748896947538,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| ||
|short_description=p16@MBP | |||
}} | }} |
Latest revision as of 18:30, 24 September 2015
Short description: | p16@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_MBP_5end |
Coexpression cluster: | C1446_CD14_Mast_CD14CD16_Basophils_Melanocyte_Neutrophils_immature |
Association with transcript: | -408bp_to_ENST00000397863_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.18e-64 | 98 |
blood island | 1.18e-64 | 98 |
bone marrow | 2.76e-61 | 76 |
hemolymphoid system | 1.22e-56 | 108 |
bone element | 2.06e-55 | 82 |
immune system | 2.60e-50 | 93 |
skeletal element | 8.36e-49 | 90 |
skeletal system | 4.87e-42 | 100 |
lateral plate mesoderm | 2.72e-26 | 203 |
musculoskeletal system | 3.15e-23 | 167 |
mesoderm | 1.78e-14 | 315 |
mesoderm-derived structure | 1.78e-14 | 315 |
presumptive mesoderm | 1.78e-14 | 315 |
connective tissue | 1.99e-14 | 371 |
blood | 9.10e-07 | 15 |
haemolymphatic fluid | 9.10e-07 | 15 |
organism substance | 9.10e-07 | 15 |