FFCP PHASE1:Hg19::chr18:67614976..67614982,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:67614976..67614982,- to FFCP PHASE1:Hg19::chr18:67614976..67614982,-: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10666 | |EntrezGene=10666 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16961 | |HGNC=16961 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=106bp_to_uc010dqo.2_5end | |||
|cluster_id=chr18:67614976..67614982,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_7_at_CD226_5end | |||
|id=chr18:67614976..67614982,- | |||
|ontology_enrichment_celltype=CL:0000738!1.10e-49!140;CL:0002087!1.91e-49!119;CL:0002031!6.59e-48!124;CL:0000037!1.59e-41!172;CL:0000566!1.59e-41!172;CL:0002032!6.28e-40!165;CL:0000837!6.28e-40!165;CL:0002057!1.38e-39!42;CL:0000988!3.57e-39!182;CL:0000766!9.06e-37!76;CL:0000860!3.48e-36!45;CL:0000839!3.68e-35!70;CL:0000557!1.79e-34!71;CL:0002194!5.50e-33!63;CL:0000576!5.50e-33!63;CL:0000040!5.50e-33!63;CL:0000559!5.50e-33!63;CL:0002009!1.37e-31!65;CL:0000763!4.90e-25!112;CL:0000049!4.90e-25!112;CL:0000838!9.38e-14!52;CL:0000084!1.66e-13!25;CL:0000827!1.66e-13!25;CL:0000542!2.33e-13!53;CL:0000051!2.33e-13!53;CL:0000791!2.49e-13!18;CL:0000789!2.49e-13!18;CL:0002420!2.49e-13!18;CL:0002419!2.49e-13!18;CL:0000790!2.49e-13!18;CL:0000134!2.03e-11!358;CL:0002320!8.34e-11!365;CL:0000625!3.26e-09!11;CL:0000219!4.05e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.70e-49;33!CL:0002057;4.70e-49;33!CL:0000473;6.17e-37;39!CL:0000234;6.17e-37;39!CL:0000576;4.48e-24;48!CL:0000766;4.97e-16;69!CL:0002087;1.59e-12;104!CL:0000763;4.20e-08;100!CL:0000738;4.60e-08;136!CL:0000623;5.43e-07;3!CL:0000625;7.25e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.64e-44,42;CL:0002057,1.64e-44,42;CL:0000473,2.97e-42,48;CL:0000234,2.97e-42,48;CL:0002194,1.40e-39,59;CL:0000576,1.40e-39,59;CL:0000040,1.40e-39,59;CL:0000559,1.40e-39,59;CL:0002009,4.04e-38,61;CL:0002087,9.60e-37,115;CL:0002031,6.33e-35,120;CL:0000839,7.55e-35,66;CL:0000766,1.66e-34,72;CL:0000557,2.98e-34,67;CL:0000738,3.36e-32,136;CL:0002032,4.39e-26,161;CL:0000837,4.39e-26,161;CL:0000037,1.07e-24,168;CL:0000988,4.53e-23,177;CL:0000763,3.69e-21,108;CL:0000049,3.69e-21,108;CL:0000134,1.31e-08,354;CL:0002320,2.68e-08,361;CL:0000219,3.34e-07,386;CL:0000623,5.78e-07,3;CL:0000825,5.78e-07,3;CL:0000625,6.81e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.10e-33;42!CL:0000049;1.32e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.73e-40!102;UBERON:0003061!2.73e-40!102;UBERON:0002193!1.79e-36!112;UBERON:0002371!4.43e-29!80;UBERON:0002405!2.52e-26!115;UBERON:0001474!4.03e-26!86;UBERON:0004765!2.68e-20!101;UBERON:0001434!2.68e-20!101;UBERON:0003081!1.05e-11!216;UBERON:0002384!6.14e-11!375;UBERON:0002204!3.72e-08!167;UBERON:0000178!1.98e-07!15;UBERON:0000179!1.98e-07!15;UBERON:0000463!1.98e-07!15 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.40e-29,76;UBERON:0001474,4.97e-27,82;UBERON:0002390,6.57e-26,98;UBERON:0003061,6.57e-26,98;UBERON:0004765,3.74e-24,90;UBERON:0002405,3.35e-23,93;UBERON:0002193,5.65e-23,108;UBERON:0001434,3.35e-21,100;UBERON:0002204,1.55e-10,167;UBERON:0003081,1.65e-09,203;UBERON:0002384,7.12e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.314843125254717,0.393364276848904,3.0706351847777,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.651032612147555,0,0,0.257575567634187,0.726991193897824,1.51150377475524,0.485168122375632,0.697287110717054,2.87817521615278,0.309706370895104,9.20615655430881,10.246428261164,4.02019790810595,3.10271112662957,1.29096936716765,1.35426486594342,1.31769637679823,1.91034305040492,0.449446968890169,3.97909060082173,2.24650318953266,1.91801137739712,4.94776950280074,7.38015533200038,5.96714650745772,0.870627715885752,2.26954089876456,0.622822248995575,5.02497330513487,5.21482918420201,3.04064382587163,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0,1.17030546773475,0,0,0,1.11410456885174,0.589211814949674,0.443067789167242,0,2.5618263945135,1.43065282315866,0.164437904603676,1.93445012450094,0.579606171470105,0.14828656316206,0,0,1.47302145506836,0.766440987203842,0,0.253019692019503,0.95569624297229,0,0,2.25862678616659,2.94369205655162,1.24930726552346,0,0.821127996921047,0.201606743224732,2.67440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,5.57215159357655,0.664789802594326,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.448340575974109,1.37921532141349,2.15627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,1.10776324914963,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,2.18944576355981,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.257831551894309,0.89947040332436,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,5.12909587685173 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.328402357799783,0.314843125254717,0.393364276848904,3.0706351847777,0.309632246632152,0,0,0,0,0,0,1.10799081706375,0.601633342410425,0.651032612147555,0,0,0.257575567634187,0.726991193897824,1.51150377475524,0.485168122375632,0.697287110717054,2.87817521615278,0.309706370895104,9.20615655430881,10.246428261164,4.02019790810595,3.10271112662957,1.29096936716765,1.35426486594342,1.31769637679823,1.91034305040492,0.449446968890169,3.97909060082173,2.24650318953266,1.91801137739712,4.94776950280074,7.38015533200038,5.96714650745772,0.870627715885752,2.26954089876456,0.622822248995575,5.02497330513487,5.21482918420201,3.04064382587163,0.605399502633369,0.368277635987565,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.393419540227666,0.393010762749165,0,1.17030546773475,0,0,0,1.11410456885174,0.589211814949674,0.443067789167242,0,2.5618263945135,1.43065282315866,0.164437904603676,1.93445012450094,0.579606171470105,0.14828656316206,0,0,1.47302145506836,0.766440987203842,0,0.253019692019503,0.95569624297229,0,0,2.25862678616659,2.94369205655162,1.24930726552346,0,0.821127996921047,0.201606743224732,2.67440195783507,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9472843619281,5.57215159357655,0.664789802594326,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0.492663237895943,0.176096868026452,0.207328115540772,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0.448340575974109,1.37921532141349,2.15627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620304078368662,0.647142602455851,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52234282769651,0,0,0.476463550915578,0.411362273086194,0.648473311192717,1.08006287447623,0,0,0,0,0,0,0.0711418433484141,0,0.199579371432817,0,0.211673582723883,0,0,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988823245360557,0,0,0,0,0,1.10776324914963,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,1.16495949527454,0,0,0.0674035438541849,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0.191915197319445,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79994958341972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,2.18944576355981,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.0714765441766563,0,0.116241425368125,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0.0771741581079447,0,0,0,0,0,0,0,0,0.469919589899268,0.257831551894309,0.89947040332436,0,0.352894871715692,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0,0,0,5.12909587685173 | ||
|short_description=p7@CD226 | |||
}} | }} |
Latest revision as of 06:41, 20 September 2015
Short description: | p7@CD226 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CD226_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 106bp_to_uc010dqo.2_5end |
EntrezGene: | CD226 |
HGNC: | 16961 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.64e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.64e-44 | 42 |
defensive cell | 2.97e-42 | 48 |
phagocyte | 2.97e-42 | 48 |
monopoietic cell | 1.40e-39 | 59 |
monocyte | 1.40e-39 | 59 |
monoblast | 1.40e-39 | 59 |
promonocyte | 1.40e-39 | 59 |
macrophage dendritic cell progenitor | 4.04e-38 | 61 |
nongranular leukocyte | 9.60e-37 | 115 |
hematopoietic lineage restricted progenitor cell | 6.33e-35 | 120 |
myeloid lineage restricted progenitor cell | 7.55e-35 | 66 |
myeloid leukocyte | 1.66e-34 | 72 |
granulocyte monocyte progenitor cell | 2.98e-34 | 67 |
leukocyte | 3.36e-32 | 136 |
hematopoietic oligopotent progenitor cell | 4.39e-26 | 161 |
hematopoietic multipotent progenitor cell | 4.39e-26 | 161 |
hematopoietic stem cell | 1.07e-24 | 168 |
hematopoietic cell | 4.53e-23 | 177 |
myeloid cell | 3.69e-21 | 108 |
common myeloid progenitor | 3.69e-21 | 108 |
mesenchymal cell | 1.31e-08 | 354 |
connective tissue cell | 2.68e-08 | 361 |
motile cell | 3.34e-07 | 386 |
natural killer cell | 5.78e-07 | 3 |
pro-NK cell | 5.78e-07 | 3 |
CD8-positive, alpha-beta T cell | 6.81e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.40e-29 | 76 |
bone element | 4.97e-27 | 82 |
hematopoietic system | 6.57e-26 | 98 |
blood island | 6.57e-26 | 98 |
skeletal element | 3.74e-24 | 90 |
immune system | 3.35e-23 | 93 |
hemolymphoid system | 5.65e-23 | 108 |
skeletal system | 3.35e-21 | 100 |
musculoskeletal system | 1.55e-10 | 167 |
lateral plate mesoderm | 1.65e-09 | 203 |
connective tissue | 7.12e-08 | 371 |