FFCP PHASE1:Hg19::chr18:5397256..5397268,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr18:5397256..5397268,- to FFCP PHASE1:Hg19::chr18:5397256..5397268,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:5397256..5397268,- | |||
|description=CAGE_peak_at_chr18:5397256..5397268,- | |||
|id=chr18:5397256..5397268,- | |||
|ontology_enrichment_celltype=CL:0002057!3.41e-19!42;CL:0000860!3.06e-17!45;CL:0002194!2.35e-14!63;CL:0000576!2.35e-14!63;CL:0000040!2.35e-14!63;CL:0000559!2.35e-14!63;CL:0002009!1.38e-13!65;CL:0000839!7.06e-12!70;CL:0000557!1.44e-11!71;CL:0000766!3.76e-10!76 | |||
|ontology_enrichment_celltype_v019=CL:0000473;5.93e-09;39!CL:0000234;5.93e-09;39!CL:0000860;3.21e-07;33!CL:0002057;3.21e-07;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.68e-08,48;CL:0000234,3.68e-08,48;CL:0000860,4.86e-07,42;CL:0002057,4.86e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005425;1.64e-10;1!UBERON:0006222;2.16e-10;1!CL:0002057;6.20e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3112;5.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3112,8.24e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0001049!1.78e-23!57;UBERON:0005068!1.78e-23!57;UBERON:0006241!1.78e-23!57;UBERON:0007135!1.78e-23!57;UBERON:0003075!1.71e-18!86;UBERON:0007284!1.71e-18!86;UBERON:0007023!2.66e-18!115;UBERON:0002346!3.80e-18!90;UBERON:0002616!1.11e-17!59;UBERON:0005743!4.49e-17!86;UBERON:0001017!1.13e-16!82;UBERON:0002780!5.21e-16!41;UBERON:0001890!5.21e-16!41;UBERON:0006240!5.21e-16!41;UBERON:0003080!2.00e-15!42;UBERON:0000073!3.04e-15!94;UBERON:0001016!3.04e-15!94;UBERON:0002020!4.30e-15!34;UBERON:0003528!4.30e-15!34;UBERON:0001893!3.56e-14!34;UBERON:0000955!3.67e-14!69;UBERON:0006238!3.67e-14!69;UBERON:0002791!1.16e-13!33;UBERON:0001869!1.30e-12!32;UBERON:0002619!1.84e-12!22;UBERON:0003056!2.00e-11!61;UBERON:0000956!2.07e-10!25;UBERON:0000203!2.07e-10!25;UBERON:0001950!2.21e-10!20;UBERON:0002371!4.96e-10!80;UBERON:0003076!1.54e-09!15;UBERON:0003057!1.54e-09!15;UBERON:0000153!4.73e-09!129;UBERON:0007811!4.73e-09!129;UBERON:0000924!1.03e-08!173;UBERON:0006601!1.03e-08!173;UBERON:0004121!1.12e-08!169;UBERON:0001474!1.20e-08!86;UBERON:0004765!1.84e-08!101;UBERON:0001434!1.84e-08!101;UBERON:0000033!1.95e-08!123;UBERON:0000062!3.57e-08!511;UBERON:0002298!3.68e-08!8;UBERON:0000467!1.00e-07!625;UBERON:0000480!1.18e-07!626;UBERON:0000922!1.28e-07!612;UBERON:0004732!1.96e-07!13;UBERON:0000923!2.29e-07!604;UBERON:0005291!2.29e-07!604;UBERON:0006598!2.29e-07!604;UBERON:0002532!2.29e-07!604;UBERON:0002050!2.70e-07!605;UBERON:0005423!2.70e-07!605;UBERON:0000468!5.04e-07!659;UBERON:0001872!6.55e-07!5;UBERON:0002390!7.48e-07!102;UBERON:0003061!7.48e-07!102;UBERON:0002204!8.45e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;1.64e-10;1!UBERON:0001785;1.64e-10;1!UBERON:0002464;1.64e-10;1!UBERON:0004904;1.64e-10;1!UBERON:0001021;1.64e-10;1!UBERON:0002038;5.53e-10;1!UBERON:0009661;5.53e-10;1!UBERON:0002950;5.53e-10;1!UBERON:0001891;5.53e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.65e-10,1;UBERON:0001785,1.65e-10,1;UBERON:0002464,1.65e-10,1;UBERON:0004904,1.65e-10,1;UBERON:0001021,1.65e-10,1;UBERON:0003902,1.65e-10,1;UBERON:0005425,1.65e-10,1;UBERON:0002038,7.55e-10,1;UBERON:0009661,7.55e-10,1;UBERON:0002950,7.55e-10,1;UBERON:0001891,7.55e-10,1;UBERON:0009616,7.55e-10,1;UBERON:0010286,7.55e-10,1;UBERON:0003075,4.78e-09,82;UBERON:0007284,4.78e-09,82;UBERON:0001049,8.11e-09,56;UBERON:0005068,8.11e-09,56;UBERON:0006241,8.11e-09,56;UBERON:0007135,8.11e-09,56;UBERON:0002346,1.47e-08,86;UBERON:0000073,3.54e-07,53;UBERON:0002616,3.54e-07,53;UBERON:0010371,7.91e-07,104 | |||
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| ||
|short_description=p@chr18:5397256..5397268,- | |||
}} | }} |
Latest revision as of 01:26, 26 July 2015
Short description: | p@chr18:5397256..5397268, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:5397256..5397268, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.68e-08 | 48 |
phagocyte | 3.68e-08 | 48 |
classical monocyte | 4.86e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.86e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.65e-10 | 1 |
cranial nerve | 1.65e-10 | 1 |
nerve trunk | 1.65e-10 | 1 |
nerve connecting eye with brain | 1.65e-10 | 1 |
nerve | 1.65e-10 | 1 |
retinal neural layer | 1.65e-10 | 1 |
presumptive neural retina | 1.65e-10 | 1 |
substantia nigra | 7.55e-10 | 1 |
midbrain nucleus | 7.55e-10 | 1 |
regional part of midbrain | 7.55e-10 | 1 |
midbrain | 7.55e-10 | 1 |
presumptive midbrain | 7.55e-10 | 1 |
midbrain neural tube | 7.55e-10 | 1 |
neural plate | 4.78e-09 | 82 |
presumptive neural plate | 4.78e-09 | 82 |
neural tube | 8.11e-09 | 56 |
neural rod | 8.11e-09 | 56 |
future spinal cord | 8.11e-09 | 56 |
neural keel | 8.11e-09 | 56 |
neurectoderm | 1.47e-08 | 86 |
regional part of nervous system | 3.54e-07 | 53 |
regional part of brain | 3.54e-07 | 53 |
ecto-epithelium | 7.91e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
papillary adenocarcinoma | 8.24e-10 | 1 |