FFCP PHASE1:Hg19::chr18:53069201..53069216,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:53069201..53069216,- to FFCP PHASE1:Hg19::chr18:53069201..53069216,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=B4DUG3 | |UniProt=B4DUG3 | ||
|association_with_transcript=-280bp_to_ENST00000537856,uc010xdu.1_5end | |||
|cluster_id=chr18:53069201..53069216,- | |||
|description=CAGE_peak_39_at_TCF4_5end | |||
|id=chr18:53069201..53069216,- | |||
|ontology_enrichment_celltype=CL:0000055!1.16e-07!180;CL:0002620!6.38e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002617;9.00e-12;2!CL:0002579;2.19e-08;3!CL:0002605;3.92e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.48e-11,2;CL:0002579,2.20e-08,3;CL:0002605,3.80e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.06e-19!82;UBERON:0005743!1.50e-18!86;UBERON:0000073!9.42e-18!94;UBERON:0001016!9.42e-18!94;UBERON:0001049!1.04e-15!57;UBERON:0005068!1.04e-15!57;UBERON:0006241!1.04e-15!57;UBERON:0007135!1.04e-15!57;UBERON:0007023!1.69e-15!115;UBERON:0000955!1.76e-15!69;UBERON:0006238!1.76e-15!69;UBERON:0001893!9.88e-14!34;UBERON:0002616!1.20e-13!59;UBERON:0002020!2.90e-13!34;UBERON:0003528!2.90e-13!34;UBERON:0002791!5.61e-13!33;UBERON:0002780!7.91e-13!41;UBERON:0001890!7.91e-13!41;UBERON:0006240!7.91e-13!41;UBERON:0002346!1.03e-12!90;UBERON:0001869!1.51e-12!32;UBERON:0003075!1.96e-12!86;UBERON:0007284!1.96e-12!86;UBERON:0003080!2.67e-12!42;UBERON:0000956!3.51e-11!25;UBERON:0000203!3.51e-11!25;UBERON:0000025!3.99e-10!194;UBERON:0004111!3.95e-09!241;UBERON:0002619!5.07e-09!22;UBERON:0001950!7.84e-09!20;UBERON:0003056!2.50e-08!61;UBERON:0000468!2.89e-08!659;UBERON:0000924!3.29e-08!173;UBERON:0006601!3.29e-08!173;UBERON:0000119!5.05e-08!312;UBERON:0000483!5.07e-08!309;UBERON:0004121!6.64e-08!169;UBERON:0000475!1.37e-07!365;UBERON:0000477!1.67e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.90e-10;9!UBERON:0000042;3.90e-10;9!UBERON:0003688;7.88e-09;6!UBERON:0002358;7.88e-09;6!UBERON:0003684;7.88e-09;6!UBERON:0001178;7.88e-09;6!UBERON:0000956;6.40e-07;25!UBERON:0000203;6.40e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,5.73e-09,6;UBERON:0002358,5.73e-09,6;UBERON:0003684,5.73e-09,6;UBERON:0001178,5.73e-09,6;UBERON:0004457,1.02e-07,12;UBERON:0000042,1.02e-07,12;UBERON:0000956,7.26e-07,25;UBERON:0000203,7.26e-07,25 | |||
|phase1_expression=1.09007027562334,1.2846031433459,1.83240725324762,0,0.446961094427288,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0.730310090387373,0,0.123121058076788,0,0.313454721478088,1.43117993565528,0.273748850145768,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.895037932904712,0.722878304769133,0,0.144846518960824,0,0.486634870302636,0.0945348171640679,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0.516833518338658,0.35576626268671,3.01248551488203,0.805658634218294,0,0.488124115096339,0,0,0.17859945656816,0,0.563057402416611,0,0,0.183201743930407,0,0,0,0,0.25326102332916,0,0.860509862246441,0.709336764396714,0.560677600142307,1.06748995729705,0,0.933633106199299,0.67355336034844,0.326923806226917,0.151357427644931,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0.640672166455702,0.423863802319124,0.300091096084402,0.309157587715317,1.28820270022815,0.18611685633159,0.168776332241266,1.16924406193438,0.757301322732344,0.920498986422993,0.484938170456436,1.42003837006646,0.705264687593482,0.169560592310488,0,0,0,0,0,0.116193942869518,0,0,0,0,0,1.38134921352481,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0.352226082707465,0.721832238805369,0.925971025153221,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0.224262168690721,0,0,0.129271715757778,3.57656445851882,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0.76228387266739,1.30139853857622,0,0.335032530668698,0.637938751653163,0,0,0,0.36807447515742,0,0,0.207970861530807,0,0.315404830067869,0,0.300946099727719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.992431231275107,0.767309866440312,0.841980283299221,1.28139149255701,2.04682899626681,0.965123526861645,0,0,0,0.0821271560138091,0,0,1.0877350463246,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.412164046590889,0.0915694648183434,0.082509499920588,0,0,0,0.193341436584244,0,0,0,0.214840489736547,0.145016693914229,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0.869932992075073,0.37064843820784,0,0,0,0.190630193923825,0,0,0.636406495851874,0,0.359744915166629,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0.551365343546124,0,0,0,0,0,0.30982349809975,0.281695602532241,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.703347082052564,0,0,0,0.796991953004279,0.552567831062295,0,0.613612095012929,0,0,0,0,0,0.0986434056369336,0,1.11136990144637,0.969332746095218,0.556608588971108,0,0,0,0,0,0,0,0,0,0,0,0.361789315876224,0,0.552896299656123,0,0,0,0,0.384751292518985,0,0,0,0.108647371922008,0,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0,4.80600442875399,0.649165919226273,0,0.176915129006678,0,0,0,0,1.28062152663286,0,0,0,0,0,0,1.20990716048664,0.91821828489147,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.451961481561065,0,0,0.633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,2.03856309110421,1.04602846312333,0.713987523454252,0,0,0.136905378891993,0,0.429765441419957,0,0.837847203816763,0.687481272035051,0,0.399358000997982,0.429226048136571,0.223171457441873,1.94832070211506,0,0,0,0,0,0,0,0,1.22583065500418,0.160753148465019,0,0.415440338029185,0,0,0.607495566580247,0,0,0.209818352539992,0,0.179287339332845,0,0.714695326373367,0,0,0,0,0,1.19730191562487,0,0.340776043570843,0,0.146552233678082,0,0.387848869084652,0.39669780522807,0,0,0.106787412567695,0.471612915298998,1.24271716604159,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,1.34228891392159,0.751145584238999,0,0.554645257684261,0.124192805882767,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,0,0,0,0,0,0,0.310874401165561,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57785949122191,0.428883182749851,0,0.226705925512272,0.694567422971502,0,0.358177682162975,0,0.657852148736121,0,0,0,0,0,0.303859956177382,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41539347670307,0.218419276384028,0.169732529954025,0.850299680406731,0,0,0.318004350653419,0,0,0,1.531227386766,0.385375350578757,0,0.319267718114302,0,0.252071696221718,0.414943514785307,0.645902582527404,0,0,0,0,0,0,0,0,0.300841313397029,0,0,0,0,0,0.742913430802341,0,0.206686796501184,0.380494861163441,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,1.68534503309014,0,0.342976018874837,0.611727596791485,0.657727735628491,0,0,0.156986185701028,0.314231179832004,0.280272163313789,1.82631744101899,0,0,0.285906176706625,0,0,2.78173235684127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0.485710993059139,0,0.596852325484105,0,3.72722070728568,0,0,0,0.218559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| ||
|short_description=p39@TCF4 | |||
}} | }} |
Latest revision as of 20:54, 19 September 2015
Short description: | p39@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_39_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | -280bp_to_ENST00000537856, uc010xdu.1_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | B4DUG3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.48e-11 | 2 |
omentum preadipocyte | 2.20e-08 | 3 |
astrocyte of the cerebral cortex | 3.80e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
omentum | 5.73e-09 | 6 |
peritoneum | 5.73e-09 | 6 |
abdominal cavity | 5.73e-09 | 6 |
visceral peritoneum | 5.73e-09 | 6 |
cavity lining | 1.02e-07 | 12 |
serous membrane | 1.02e-07 | 12 |
cerebral cortex | 7.26e-07 | 25 |
pallium | 7.26e-07 | 25 |