FFCP PHASE1:Hg19::chr18:52989081..52989117,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:52989081..52989117,- to FFCP PHASE1:Hg19::chr18:52989081..52989117,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6925 | |EntrezGene=6925 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11634 | |HGNC=11634 | ||
|TSSclassifier=strong | |||
|UniProt=G0LNU9,P15884,G0LNV0 | |UniProt=G0LNU9,P15884,G0LNV0 | ||
|association_with_transcript=0bp_to_NM_001243234,NM_001243235_5end | |||
|cluster_id=chr18:52989081..52989117,- | |||
|description=CAGE_peak_7_at_TCF4_5end | |||
|id=chr18:52989081..52989117,- | |||
|ontology_enrichment_celltype=CL:0000945!6.59e-10!24;CL:0000826!6.59e-10!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.56e-11;24!CL:0000236;5.53e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,5.41e-11,24;CL:0000826,5.41e-11,24;CL:0000236,2.91e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.87e-11;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.25e-37!115;UBERON:0000073!9.81e-27!94;UBERON:0001016!9.81e-27!94;UBERON:0001017!2.10e-26!82;UBERON:0001049!7.78e-26!57;UBERON:0005068!7.78e-26!57;UBERON:0006241!7.78e-26!57;UBERON:0007135!7.78e-26!57;UBERON:0005743!6.13e-25!86;UBERON:0002616!1.76e-24!59;UBERON:0000955!3.66e-24!69;UBERON:0006238!3.66e-24!69;UBERON:0003080!1.13e-20!42;UBERON:0002780!1.84e-20!41;UBERON:0001890!1.84e-20!41;UBERON:0006240!1.84e-20!41;UBERON:0002346!1.03e-19!90;UBERON:0003075!1.06e-18!86;UBERON:0007284!1.06e-18!86;UBERON:0000924!8.33e-18!173;UBERON:0006601!8.33e-18!173;UBERON:0004121!7.45e-17!169;UBERON:0001893!3.42e-16!34;UBERON:0000033!4.60e-16!123;UBERON:0000153!5.86e-16!129;UBERON:0007811!5.86e-16!129;UBERON:0002020!6.57e-16!34;UBERON:0003528!6.57e-16!34;UBERON:0002791!1.23e-15!33;UBERON:0001869!5.10e-15!32;UBERON:0003056!3.93e-13!61;UBERON:0002619!3.45e-12!22;UBERON:0000956!1.88e-11!25;UBERON:0000203!1.88e-11!25;UBERON:0001950!4.65e-11!20;UBERON:0000479!3.30e-10!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.12e-17;41!UBERON:0001890;2.12e-17;41!UBERON:0001893;1.16e-15;34!UBERON:0002791;1.69e-15;32!UBERON:0003528;2.09e-15;34!UBERON:0002020;2.09e-15;34!UBERON:0001869;2.15e-15;32!UBERON:0000073;3.32e-15;53!UBERON:0002616;3.32e-15;53!UBERON:0002619;2.22e-14;22!UBERON:0001950;4.91e-13;20!UBERON:0000956;9.35e-13;25!UBERON:0000203;9.35e-13;25!UBERON:0007023;2.52e-12;114!UBERON:0001017;1.09e-11;75!UBERON:0001016;4.46e-11;83!UBERON:0000955;6.57e-11;68!UBERON:0000125;4.84e-07;9!UBERON:0002308;4.84e-07;9!UBERON:0001894;7.62e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.90e-45,114;UBERON:0001016,5.16e-28,89;UBERON:0001049,1.12e-27,56;UBERON:0005068,1.12e-27,56;UBERON:0006241,1.12e-27,56;UBERON:0007135,1.12e-27,56;UBERON:0001017,7.46e-27,81;UBERON:0000073,1.35e-25,53;UBERON:0002616,1.35e-25,53;UBERON:0000955,3.65e-25,68;UBERON:0006238,3.65e-25,68;UBERON:0002780,5.94e-24,41;UBERON:0001890,5.94e-24,41;UBERON:0003080,5.94e-24,41;UBERON:0006240,5.94e-24,41;UBERON:0002346,2.07e-20,86;UBERON:0003075,3.37e-19,82;UBERON:0007284,3.37e-19,82;UBERON:0001893,9.69e-19,34;UBERON:0003528,2.12e-18,34;UBERON:0002020,2.12e-18,34;UBERON:0004121,6.36e-18,171;UBERON:0000924,6.36e-18,171;UBERON:0006601,6.36e-18,171;UBERON:0002791,2.14e-17,32;UBERON:0001869,2.61e-17,32;UBERON:0010314,7.79e-15,132;UBERON:0002619,1.32e-14,22;UBERON:0010371,6.56e-14,104;UBERON:0003056,8.10e-14,61;UBERON:0001950,3.23e-13,20;UBERON:0000956,5.82e-13,25;UBERON:0000203,5.82e-13,25;UBERON:0011216,1.11e-12,223;UBERON:0000479,9.43e-10,773;UBERON:0000125,5.32e-07,9;UBERON:0002308,5.32e-07,9;UBERON:0001894,8.51e-07,7;UBERON:0006222,8.51e-07,7;UBERON:0002420,8.57e-07,9;UBERON:0007245,8.57e-07,9;UBERON:0010009,8.57e-07,9;UBERON:0010011,8.57e-07,9;UBERON:0000454,8.57e-07,9 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,2.10402800032079,0.331397375727916,0,0.602694528023977,2.92124036154949,0.975865597581014,0.984968464614303,0.612002073732759,0.626909442956176,2.57612388417951,0.273748850145768,0.376627918784408,5.42535180810454,5.33653831424647,5.27362234801651,0,0,0.928896739896456,0,0,0,1.08454080812422,3.55423081218554,2.93600439334847,0.553995408531877,0.802177789880567,0.651032612147555,2.68698569087909,3.2389366601898,3.60605794687861,0.145398238779565,0,0,1.16214518452842,0.822335776043652,0,0.575384784644301,0,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0.898893937780338,0.612167784741805,0.320929027076094,0.639337125799041,1.64925650093358,0.199463657621632,0.426224750532694,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,2.42159801053347,0.736555271975129,0.316462387440884,0.633765858935825,1.70083439972035,1.25795187305026,1.46027220490444,1.65194582125657,1.6072558669708,1.14005097496499,1.59133341759272,1.27864907635244,5.27988733383968,6.00752472388345,8.89509253863555,5.12076267079809,6.80673177961221,6.8970292794538,5.2883589822789,2.86216126360609,5.12291672198504,1.17447437874188,3.05818582500183,1.32171328579026,0,2.89722493252585,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.869079113764942,4.7717156823066,1.45990461090791,0.378139268656271,0.443458794925128,0.175669571386252,2.81605012320082,0,0.370784442784429,5.19275829847493,7.48757870386849,6.24902414438666,3.81584998888547,4.57595928624102,2.97166001063652,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0.35576626268671,1.00416183829401,2.41697590265488,0,1.95249646038536,0.367663080345869,0,0.803697554556718,0.22452937262617,1.35133776579987,0,0,0.366403487860815,0,0,0,0,1.2663051166458,0.662045904066094,1.43418310374407,2.83734705758686,0.560677600142307,0,0.24666754841716,1.24484414159907,0.67355336034844,1.14423332179421,2.27036141467397,1.15235184896,1.64025002283658,0.624320153660641,0,1.49448680551801,1.87895197830024,1.45685649931318,2.38766371393822,3.26646674007829,2.94802361548243,1.85986406116378,1.18800285728205,1.48360157567134,0,0,2.35670559535693,2.50237039743928,1.6623846929051,0.877955241761676,0.612975591598039,0.751190294532984,0.567160915800105,1.25572744982203,1.49490172172997,1.05965950579781,3.00091096084402,2.57631323096097,2.31876486041066,1.48893485065272,1.35021065793013,0.779496041289589,0.252433774244115,1.56484827691909,4.0411514204703,1.77504796258307,1.5112814734146,1.01736355386293,0,0,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0,0.325808305310325,0,0,1.04337364477569,0.469634776943287,1.73239737313289,0.925971025153221,1.90254152234598,0,0,5.41677413392274,2.34004265139238,4.16167254408439,0,1.00789276919316,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0,0,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,1.56983518083505,0.87192013766656,1.83345714552375,0.129271715757778,0,0.845302752556,1.06375246633948,0,0,0,0.799266537048298,1.57275793023962,0,0,1.30294473717494,1.06617584622764,0,0.301439377059586,0,0.199945982364114,2.43247561282381,3.01354254859276,2.10833939483032,0,2.29723871668228,1.42636905040718,0.579125226670317,0.61642896765115,0.537182889719687,0,0.591092280605782,0,0.128343036279748,2.28685161800217,3.90419561572865,0.773288812777695,3.18280904135263,1.91381625495949,0,0,0,1.47229790062968,0,1.08506009479894,0.831883446123229,1.60586089917446,0.788512075169673,1.17141414992713,1.20378439891088,0,1.03473071292505,0.664225598535437,0.553107505625109,1.56390506042549,0.195801157462741,0.343143423810856,1.86091223510599,0.647142602455851,0.320182673410333,0,0,0,0.744323423456331,0,0,0.256278298511402,0,0,0,2.92998418225046,0.710246901252508,2.05317890034523,1.55776328755086,1.62694529843943,0.120859449591622,0.200506470303285,0.0920809889358963,0.68888668898764,0.546273504020151,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,2.57602529119306,2.19766715564024,1.48517099857058,0,0,0,0.580024309752732,2.00263202249038,1.38153307253517,1.24052915236078,1.93356440762893,1.16013355131383,1.19317278382541,1.24644849905432,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,1.116475108079,1.89827654831236,1.5250415513906,0.255897791311334,2.1396949401696,0.95460974377781,0,0.179872457583315,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0,0,0,3.13949796238367,0.282810863907425,1.13008116620243,1.102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|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,0,0,0,0,0.631719873426831,0,0.491467873003018,0,0,0,2.10402800032079,0.331397375727916,0,0.602694528023977,2.92124036154949,0.975865597581014,0.984968464614303,0.612002073732759,0.626909442956176,2.57612388417951,0.273748850145768,0.376627918784408,5.42535180810454,5.33653831424647,5.27362234801651,0,0,0.928896739896456,0,0,0,1.08454080812422,3.55423081218554,2.93600439334847,0.553995408531877,0.802177789880567,0.651032612147555,2.68698569087909,3.2389366601898,3.60605794687861,0.145398238779565,0,0,1.16214518452842,0.822335776043652,0,0.575384784644301,0,0,0,0.645484683583826,0,0.188242339542605,0.545812300115692,0.898893937780338,0.612167784741805,0.320929027076094,0.639337125799041,1.64925650093358,0.199463657621632,0.426224750532694,0,0.56738522469114,0.622822248995575,0,0.521482918420201,0.217188844705117,2.42159801053347,0.736555271975129,0.316462387440884,0.633765858935825,1.70083439972035,1.25795187305026,1.46027220490444,1.65194582125657,1.6072558669708,1.14005097496499,1.59133341759272,1.27864907635244,5.27988733383968,6.00752472388345,8.89509253863555,5.12076267079809,6.80673177961221,6.8970292794538,5.2883589822789,2.86216126360609,5.12291672198504,1.17447437874188,3.05818582500183,1.32171328579026,0,2.89722493252585,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301150238155546,0.511946444617674,0,0.236777252044017,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,0,0.869079113764942,4.7717156823066,1.45990461090791,0.378139268656271,0.443458794925128,0.175669571386252,2.81605012320082,0,0.370784442784429,5.19275829847493,7.48757870386849,6.24902414438666,3.81584998888547,4.57595928624102,2.97166001063652,0.596287222100115,0,0.347140501607594,0.56530794192401,0,0,0.417989933073621,0.516833518338658,0.35576626268671,1.00416183829401,2.41697590265488,0,1.95249646038536,0.367663080345869,0,0.803697554556718,0.22452937262617,1.35133776579987,0,0,0.366403487860815,0,0,0,0,1.2663051166458,0.662045904066094,1.43418310374407,2.83734705758686,0.560677600142307,0,0.24666754841716,1.24484414159907,0.67355336034844,1.14423332179421,2.27036141467397,1.15235184896,1.64025002283658,0.624320153660641,0,1.49448680551801,1.87895197830024,1.45685649931318,2.38766371393822,3.26646674007829,2.94802361548243,1.85986406116378,1.18800285728205,1.48360157567134,0,0,2.35670559535693,2.50237039743928,1.6623846929051,0.877955241761676,0.612975591598039,0.751190294532984,0.567160915800105,1.25572744982203,1.49490172172997,1.05965950579781,3.00091096084402,2.57631323096097,2.31876486041066,1.48893485065272,1.35021065793013,0.779496041289589,0.252433774244115,1.56484827691909,4.0411514204703,1.77504796258307,1.5112814734146,1.01736355386293,0,0,0,0,0,0,0,0.252320850875628,0,1.56449532329816,0.643240938192885,2.76269842704961,0.928735856063958,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,0,0,0,0,0,0.122988438543114,0.686271241194102,0,0,0,0,0.325808305310325,0,0,1.04337364477569,0.469634776943287,1.73239737313289,0.925971025153221,1.90254152234598,0,0,5.41677413392274,2.34004265139238,4.16167254408439,0,1.00789276919316,0.283550194484773,0,0.290633938513962,0.383382679165211,0,0,0.414656231081544,0,0,0.317489471460845,0.381988425558278,0,0,0.102827492703324,0,0.571652865261156,1.56983518083505,0.87192013766656,1.83345714552375,0.129271715757778,0,0.845302752556,1.06375246633948,0,0,0,0.799266537048298,1.57275793023962,0,0,1.30294473717494,1.06617584622764,0,0.301439377059586,0,0.199945982364114,2.43247561282381,3.01354254859276,2.10833939483032,0,2.29723871668228,1.42636905040718,0.579125226670317,0.61642896765115,0.537182889719687,0,0.591092280605782,0,0.128343036279748,2.28685161800217,3.90419561572865,0.773288812777695,3.18280904135263,1.91381625495949,0,0,0,1.47229790062968,0,1.08506009479894,0.831883446123229,1.60586089917446,0.788512075169673,1.17141414992713,1.20378439891088,0,1.03473071292505,0.664225598535437,0.553107505625109,1.56390506042549,0.195801157462741,0.343143423810856,1.86091223510599,0.647142602455851,0.320182673410333,0,0,0,0.744323423456331,0,0,0.256278298511402,0,0,0,2.92998418225046,0.710246901252508,2.05317890034523,1.55776328755086,1.62694529843943,0.120859449591622,0.200506470303285,0.0920809889358963,0.68888668898764,0.546273504020151,0.393373244878272,0,0.0770153371044148,0,0,0,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0,0,0,0,0,0.328014645699706,0,2.57602529119306,2.19766715564024,1.48517099857058,0,0,0,0.580024309752732,2.00263202249038,1.38153307253517,1.24052915236078,1.93356440762893,1.16013355131383,1.19317278382541,1.24644849905432,0,0,0.127612712494584,0,0,0,0,0.616067160352178,0.532306030317022,0,0,0.143124886741991,1.116475108079,1.89827654831236,1.5250415513906,0.255897791311334,2.1396949401696,0.95460974377781,0,0.179872457583315,0.54907405947211,0.353437207037059,0.202182481573316,0,0,0,0,0,3.13949796238367,0.282810863907425,1.13008116620243,1.102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| ||
|short_description=p7@TCF4 | |||
}} | }} |
Latest revision as of 20:39, 19 September 2015
Short description: | p7@TCF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_TCF4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001243234, NM_001243235_5end |
EntrezGene: | TCF4 |
HGNC: | 11634 |
UniProt: | G0LNU9P15884G0LNV0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 5.41e-11 | 24 |
pro-B cell | 5.41e-11 | 24 |
B cell | 2.91e-07 | 14 |