FFCP PHASE1:Hg19::chr18:47013532..47013544,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:47013532..47013544,- to FFCP PHASE1:Hg19::chr18:47013532..47013544,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=497661 | |EntrezGene=497661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31690 | |HGNC=31690 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TCD1 | |UniProt=Q8TCD1 | ||
|association_with_transcript=56bp_to_ENST00000318240,uc002ldk.1_5end | |||
|cluster_id=chr18:47013532..47013544,- | |||
|coexpression_cluster_id=C3723 | |||
|description=CAGE_peak_3_at_C18orf32_5end | |||
|id=chr18:47013532..47013544,- | |||
|ontology_enrichment_celltype=CL:0000766!1.42e-19!76;CL:0000557!1.80e-16!71;CL:0002057!3.03e-16!42;CL:0002009!1.98e-14!65;CL:0000839!8.24e-14!70;CL:0002194!2.27e-13!63;CL:0000576!2.27e-13!63;CL:0000040!2.27e-13!63;CL:0000559!2.27e-13!63;CL:0000860!2.38e-13!45;CL:0000738!3.50e-13!140;CL:0000763!5.41e-11!112;CL:0000049!5.41e-11!112;CL:0002031!5.40e-09!124;CL:0000037!1.28e-08!172;CL:0000566!1.28e-08!172;CL:0000988!1.65e-08!182;CL:0002087!5.15e-08!119;CL:0002032!1.33e-07!165;CL:0000837!1.33e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.72e-13;33!CL:0002057;2.72e-13;33!CL:0000473;6.12e-13;39!CL:0000234;6.12e-13;39!CL:0000766;1.94e-09;69!CL:0000576;3.15e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,8.34e-22,72;CL:0000557,1.57e-18,67;CL:0000473,2.41e-18,48;CL:0000234,2.41e-18,48;CL:0002009,2.02e-16,61;CL:0000860,2.97e-16,42;CL:0002057,2.97e-16,42;CL:0000839,1.24e-15,66;CL:0002194,2.71e-15,59;CL:0000576,2.71e-15,59;CL:0000040,2.71e-15,59;CL:0000559,2.71e-15,59;CL:0000738,3.71e-14,136;CL:0000763,3.70e-12,108;CL:0000049,3.70e-12,108;CL:0002031,8.55e-10,120;CL:0000037,2.72e-09,168;CL:0000988,6.86e-09,177;CL:0002087,9.04e-09,115;CL:0002032,3.10e-08,161;CL:0000837,3.10e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;3.73e-12;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.10e-17!57;UBERON:0005068!1.10e-17!57;UBERON:0006241!1.10e-17!57;UBERON:0007135!1.10e-17!57;UBERON:0002616!1.72e-14!59;UBERON:0002371!8.77e-14!80;UBERON:0003075!4.33e-13!86;UBERON:0007284!4.33e-13!86;UBERON:0003080!4.78e-13!42;UBERON:0002780!7.39e-13!41;UBERON:0001890!7.39e-13!41;UBERON:0006240!7.39e-13!41;UBERON:0001017!1.48e-12!82;UBERON:0001474!3.36e-12!86;UBERON:0005743!5.28e-12!86;UBERON:0002346!7.74e-12!90;UBERON:0000955!1.06e-11!69;UBERON:0006238!1.06e-11!69;UBERON:0002020!3.26e-11!34;UBERON:0003528!3.26e-11!34;UBERON:0000025!5.20e-11!194;UBERON:0000073!8.84e-11!94;UBERON:0001016!8.84e-11!94;UBERON:0001893!9.32e-11!34;UBERON:0002791!1.94e-10!33;UBERON:0004765!2.00e-10!101;UBERON:0001434!2.00e-10!101;UBERON:0001869!3.40e-10!32;UBERON:0002390!3.52e-10!102;UBERON:0003061!3.52e-10!102;UBERON:0003081!3.69e-10!216;UBERON:0002204!6.72e-10!167;UBERON:0003056!2.24e-09!61;UBERON:0002193!2.64e-09!112;UBERON:0002405!1.19e-08!115;UBERON:0002619!4.46e-08!22;UBERON:0000956!5.35e-08!25;UBERON:0000203!5.35e-08!25;UBERON:0001950!3.08e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;4.13e-10;34!UBERON:0002020;4.13e-10;34!UBERON:0002780;8.10e-10;41!UBERON:0001890;8.10e-10;41!UBERON:0002791;8.46e-10;32!UBERON:0001869;8.57e-10;32!UBERON:0001893;1.45e-09;34!UBERON:0000073;2.05e-09;53!UBERON:0002616;2.05e-09;53!UBERON:0002619;2.68e-08;22!UBERON:0000956;3.08e-08;25!UBERON:0000203;3.08e-08;25!UBERON:0001950;1.82e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.70e-17,56;UBERON:0005068,1.70e-17,56;UBERON:0006241,1.70e-17,56;UBERON:0007135,1.70e-17,56;UBERON:0000073,6.62e-16,53;UBERON:0002616,6.62e-16,53;UBERON:0002371,1.96e-15,76;UBERON:0003075,1.12e-13,82;UBERON:0007284,1.12e-13,82;UBERON:0001474,1.24e-13,82;UBERON:0002780,7.28e-13,41;UBERON:0001890,7.28e-13,41;UBERON:0003080,7.28e-13,41;UBERON:0006240,7.28e-13,41;UBERON:0001017,2.21e-12,81;UBERON:0002346,2.43e-12,86;UBERON:0004765,1.24e-11,90;UBERON:0000955,1.59e-11,68;UBERON:0006238,1.59e-11,68;UBERON:0002390,3.17e-11,98;UBERON:0003061,3.17e-11,98;UBERON:0003528,3.22e-11,34;UBERON:0002020,3.22e-11,34;UBERON:0000025,4.18e-11,192;UBERON:0001016,4.66e-11,89;UBERON:0002405,7.34e-11,93;UBERON:0001893,9.21e-11,34;UBERON:0003081,9.69e-11,203;UBERON:0001434,1.79e-10,100;UBERON:0002791,2.91e-10,32;UBERON:0002193,3.18e-10,108;UBERON:0001869,3.36e-10,32;UBERON:0002204,1.08e-09,167;UBERON:0003056,1.38e-09,61;UBERON:0010371,6.83e-09,104;UBERON:0010314,9.50e-09,132;UBERON:0002619,4.42e-08,22;UBERON:0000956,5.31e-08,25;UBERON:0000203,5.31e-08,25;UBERON:0001950,3.06e-07,20 | |||
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| ||
|short_description=p3@C18orf32 | |||
}} | }} |
Latest revision as of 17:31, 19 September 2015
Short description: | p3@C18orf32 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_C18orf32_5end |
Coexpression cluster: | C3723_nonsmall_globus_spinal_medulla_thalamus_pineal_brain |
Association with transcript: | 56bp_to_ENST00000318240, uc002ldk.1_5end |
EntrezGene: | C18orf32 |
HGNC: | 31690 |
UniProt: | Q8TCD1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 8.34e-22 | 72 |
granulocyte monocyte progenitor cell | 1.57e-18 | 67 |
defensive cell | 2.41e-18 | 48 |
phagocyte | 2.41e-18 | 48 |
macrophage dendritic cell progenitor | 2.02e-16 | 61 |
classical monocyte | 2.97e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.97e-16 | 42 |
myeloid lineage restricted progenitor cell | 1.24e-15 | 66 |
monopoietic cell | 2.71e-15 | 59 |
monocyte | 2.71e-15 | 59 |
monoblast | 2.71e-15 | 59 |
promonocyte | 2.71e-15 | 59 |
leukocyte | 3.71e-14 | 136 |
myeloid cell | 3.70e-12 | 108 |
common myeloid progenitor | 3.70e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 8.55e-10 | 120 |
hematopoietic stem cell | 2.72e-09 | 168 |
hematopoietic cell | 6.86e-09 | 177 |
nongranular leukocyte | 9.04e-09 | 115 |
hematopoietic oligopotent progenitor cell | 3.10e-08 | 161 |
hematopoietic multipotent progenitor cell | 3.10e-08 | 161 |