FFCP PHASE1:Hg19::chr18:34408734..34408780,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:34408734..34408780,- to FFCP PHASE1:Hg19::chr18:34408734..34408780,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25941 | |EntrezGene=25941 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24561 | |HGNC=24561 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=159bp_to_ENST00000383056_5end | |||
|cluster_id=chr18:34408734..34408780,- | |||
|description=CAGE_peak_1_at_TPGS2_5end | |||
|id=chr18:34408734..34408780,- | |||
|ontology_enrichment_celltype=CL:0000055!5.99e-15!180;CL:0002321!1.40e-12!248;CL:0000220!6.58e-12!246;CL:0002319!9.39e-10!25;CL:0000221!1.55e-09!71;CL:0000066!7.39e-09!254;CL:0000133!7.88e-09!59;CL:0000012!9.29e-08!682;CL:0000548!2.18e-07!679;CL:0000004!2.18e-07!679;CL:0000255!2.18e-07!679 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.04e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,8.56e-13,250;CL:0000221,6.67e-10,72;CL:0002319,9.39e-10,25;CL:0000133,7.88e-09,59;CL:0000066,8.62e-09,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!5.14e-12!312;UBERON:0000064!4.22e-11!219;UBERON:0000483!5.34e-11!309;UBERON:0004121!8.02e-10!169;UBERON:0000475!1.18e-09!365;UBERON:0005085!4.18e-09!29;UBERON:0000924!6.37e-09!173;UBERON:0006601!6.37e-09!173;UBERON:0000481!9.28e-09!347;UBERON:0000063!2.66e-08!97;UBERON:0005743!8.88e-08!86;UBERON:0001017!3.35e-07!82;UBERON:0001737!3.60e-07!9;UBERON:0000073!5.24e-07!94;UBERON:0001016!5.24e-07!94;UBERON:0000477!8.55e-07!286;UBERON:0000033!9.76e-07!123 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;3.56e-07;9!UBERON:0001557;3.56e-07;9!UBERON:0000019;8.78e-07;19!UBERON:0000047;8.78e-07;19!UBERON:0004088;8.78e-07;19!UBERON:0010230;8.78e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000119,2.61e-12,309;UBERON:0000483,2.81e-11,306;UBERON:0004121,1.63e-09,171;UBERON:0000924,1.63e-09,171;UBERON:0006601,1.63e-09,171;UBERON:0005085,1.03e-08,31;UBERON:0010371,1.67e-07,104;UBERON:0001017,1.77e-07,81;UBERON:0001737,3.60e-07,9 | |||
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| ||
|short_description=p1@TPGS2 | |||
}} | }} |
Latest revision as of 09:47, 19 September 2015
Short description: | p1@TPGS2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TPGS2_5end |
Coexpression cluster: | NA |
Association with transcript: | 159bp_to_ENST00000383056_5end |
EntrezGene: | TPGS2 |
HGNC: | 24561 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 8.56e-13 | 250 |
ectodermal cell | 6.67e-10 | 72 |
neural cell | 9.39e-10 | 25 |
neurectodermal cell | 7.88e-09 | 59 |
epithelial cell | 8.62e-09 | 253 |
Ontology term | p-value | n |
---|---|---|
cell layer | 2.61e-12 | 309 |
epithelium | 2.81e-11 | 306 |
ectoderm-derived structure | 1.63e-09 | 171 |
ectoderm | 1.63e-09 | 171 |
presumptive ectoderm | 1.63e-09 | 171 |
ectodermal placode | 1.03e-08 | 31 |
ecto-epithelium | 1.67e-07 | 104 |
central nervous system | 1.77e-07 | 81 |
larynx | 3.60e-07 | 9 |