FFCP PHASE1:Hg19::chr18:25675769..25675772,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr18:25675769..25675772,- to FFCP PHASE1:Hg19::chr18:25675769..25675772,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:25675769..25675772,- | |||
|description=CAGE_peak_at_chr18:25675769..25675772,- | |||
|id=chr18:25675769..25675772,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000064;1.13e-18;3!CL:0000067;1.13e-18;3!CL:0005012;1.13e-18;3!CL:0002304;1.13e-18;3!CL:1001319;1.22e-14;1!CL:1000600;1.22e-14;1!CL:0002568;1.22e-14;1!CL:0002569;8.10e-10;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,1.24e-18,3;CL:0000067,1.24e-18,3;CL:0005012,1.24e-18,3;CL:0002304,1.24e-18,3;CL:0002568,4.73e-15,1;CL:1001319,5.42e-15,1;CL:1000600,5.42e-15,1;CL:0002569,6.50e-10,6 | |||
|ontology_enrichment_development_v019=UBERON:0004140;1.22e-14;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4235;1.22e-14;1!DOID:3571;1.22e-14;1!DOID:3350;5.74e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3571,2.41e-14,1;DOID:4235,3.15e-14,1;DOID:3350,8.04e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0002020!2.50e-17!34;UBERON:0003528!2.50e-17!34;UBERON:0001049!3.29e-17!57;UBERON:0005068!3.29e-17!57;UBERON:0006241!3.29e-17!57;UBERON:0007135!3.29e-17!57;UBERON:0000955!1.74e-16!69;UBERON:0006238!1.74e-16!69;UBERON:0003075!2.20e-16!86;UBERON:0007284!2.20e-16!86;UBERON:0002616!3.21e-16!59;UBERON:0001893!7.42e-16!34;UBERON:0001869!7.65e-16!32;UBERON:0002780!8.82e-16!41;UBERON:0001890!8.82e-16!41;UBERON:0006240!8.82e-16!41;UBERON:0002346!8.88e-16!90;UBERON:0003080!3.45e-15!42;UBERON:0002791!5.15e-15!33;UBERON:0001017!2.37e-14!82;UBERON:0005743!4.78e-14!86;UBERON:0000073!7.53e-14!94;UBERON:0001016!7.53e-14!94;UBERON:0000956!4.72e-13!25;UBERON:0000203!4.72e-13!25;UBERON:0003056!1.51e-12!61;UBERON:0002619!2.76e-10!22;UBERON:0001950!4.87e-10!20;UBERON:0000033!1.32e-09!123;UBERON:0000153!5.14e-09!129;UBERON:0007811!5.14e-09!129;UBERON:0004121!1.17e-08!169;UBERON:0000924!1.61e-08!173;UBERON:0006601!1.61e-08!173;UBERON:0000025!9.63e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0001778;1.13e-18;3!UBERON:0001775;1.13e-18;3!UBERON:0003112;1.22e-14;1!UBERON:0004645;1.22e-14;1!UBERON:0011158;1.22e-14;1!UBERON:0001256;1.22e-14;1!UBERON:0003128;1.22e-14;1!UBERON:0001703;1.22e-14;1!UBERON:0002241;1.22e-14;1!UBERON:0001259;1.22e-14;1!UBERON:0000488;2.94e-14;4!UBERON:0002203;8.10e-10;6!UBERON:0001768;8.10e-10;6!UBERON:0002200;8.10e-10;6!UBERON:0003422;8.10e-10;6!UBERON:0003104;1.53e-08;7!UBERON:0009142;1.53e-08;7!UBERON:0001255;5.74e-08;2!UBERON:0001556;5.74e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001778,1.24e-18,3;UBERON:0001775,1.24e-18,3;UBERON:0004645,5.42e-15,1;UBERON:0001256,5.42e-15,1;UBERON:0001259,5.42e-15,1;UBERON:0003112,7.13e-15,1;UBERON:0011158,7.13e-15,1;UBERON:0003128,7.13e-15,1;UBERON:0001703,7.13e-15,1;UBERON:0002241,7.13e-15,1;UBERON:0004761,7.13e-15,1;UBERON:0009617,7.13e-15,1;UBERON:0000488,3.16e-14,4;UBERON:0003422,6.50e-10,6;UBERON:0002203,8.48e-10,6;UBERON:0001768,8.48e-10,6;UBERON:0002200,8.48e-10,6;UBERON:0001255,3.82e-08,2;UBERON:0001556,3.82e-08,2;UBERON:0005253,4.38e-08,2 | |||
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| ||
|short_description=p@chr18:25675769..25675772,- | |||
}} | }} |
Latest revision as of 00:12, 26 July 2015
Short description: | p@chr18:25675769..25675772, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:25675769..25675772, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 1.24e-18 | 3 |
ciliated epithelial cell | 1.24e-18 | 3 |
multi-ciliated epithelial cell | 1.24e-18 | 3 |
non-pigmented ciliary epithelial cell | 1.24e-18 | 3 |
mesenchymal stem cell of Wharton's jelly | 4.73e-15 | 1 |
bladder cell | 5.42e-15 | 1 |
lower urinary tract cell | 5.42e-15 | 1 |
mesenchymal stem cell of umbilical cord | 6.50e-10 | 6 |
Ontology term | p-value | n |
---|---|---|
ciliary epithelium | 1.24e-18 | 3 |
ciliary body | 1.24e-18 | 3 |
urinary bladder urothelium | 5.42e-15 | 1 |
wall of urinary bladder | 5.42e-15 | 1 |
mucosa of urinary bladder | 5.42e-15 | 1 |
olfactory region | 7.13e-15 | 1 |
primary subdivision of skull | 7.13e-15 | 1 |
cranium | 7.13e-15 | 1 |
neurocranium | 7.13e-15 | 1 |
chondrocranium | 7.13e-15 | 1 |
cartilaginous neurocranium | 7.13e-15 | 1 |
head paraxial mesoderm | 7.13e-15 | 1 |
atypical epithelium | 3.16e-14 | 4 |
mesenchyme of umbilical cord | 6.50e-10 | 6 |
vasculature of eye | 8.48e-10 | 6 |
uvea | 8.48e-10 | 6 |
vasculature of head | 8.48e-10 | 6 |
urinary bladder | 3.82e-08 | 2 |
lower urinary tract | 3.82e-08 | 2 |
head mesenchyme | 4.38e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
liver cancer | 2.41e-14 | 1 |
spindle cell sarcoma | 3.15e-14 | 1 |
mesenchymal cell neoplasm | 8.04e-08 | 2 |