FFCP PHASE1:Hg19::chr18:21594180..21594202,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr18:21594180..21594202,+ to FFCP PHASE1:Hg19::chr18:21594180..21594202,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=125488 | |EntrezGene=125488 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26595 | |HGNC=26595 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N584 | |UniProt=Q8N584 | ||
|association_with_transcript=-181bp_to_ENST00000317571,NM_001135993,NM_001243425,uc002kuv.2,uc002kuw.2_5end | |||
|cluster_id=chr18:21594180..21594202,+ | |||
|description=CAGE_peak_9_at_TTC39C_5end | |||
|id=chr18:21594180..21594202,+ | |||
|ontology_enrichment_celltype=CL:0000542!4.33e-18!53;CL:0000051!4.33e-18!53;CL:0000838!1.24e-17!52;CL:0000791!6.90e-10!18;CL:0000789!6.90e-10!18;CL:0002420!6.90e-10!18;CL:0002419!6.90e-10!18;CL:0000790!6.90e-10!18;CL:0000084!8.79e-10!25;CL:0000827!8.79e-10!25;CL:0000945!1.18e-07!24;CL:0000826!1.18e-07!24;CL:0000624!8.44e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.81e-23;18!CL:0000789;6.81e-23;18!CL:0002419;6.81e-23;18!CL:0000624;1.88e-22;6!CL:0000084;7.30e-19;25!CL:0000898;8.36e-13;3!CL:0000784;9.58e-13;3!CL:0000540;1.32e-10;6!CL:0000404;1.32e-10;6!CL:0000815;3.42e-09;2!CL:0000792;3.42e-09;2!CL:0002677;3.42e-09;2!CL:0000625;3.93e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.68e-23,18;CL:0000789,4.68e-23,18;CL:0002420,4.68e-23,18;CL:0002419,4.68e-23,18;CL:0000790,4.68e-23,18;CL:0000624,1.92e-22,6;CL:0000084,6.49e-19,25;CL:0000827,6.49e-19,25;CL:0000784,8.13e-13,3;CL:0000898,8.79e-13,3;CL:0000838,7.50e-11,52;CL:0000542,1.38e-10,53;CL:0000051,1.38e-10,53;CL:0000540,2.18e-10,6;CL:0000031,2.18e-10,6;CL:0000404,2.18e-10,6;CL:0000815,3.58e-09,2;CL:0000792,3.58e-09,2;CL:0002677,3.58e-09,2;CL:0000625,2.98e-08,11;CL:0000047,8.54e-08,8 | |||
|ontology_enrichment_development_v019=CL:0000790;6.81e-23;18!CL:0000031;1.32e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;3.61e-08;2!UBERON:0005058;3.61e-08;2!UBERON:0009113;3.61e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.49e-09,4;UBERON:0005058,4.49e-09,4;UBERON:0009113,4.49e-09,4;UBERON:0003295,4.49e-09,4;UBERON:0005562,4.49e-09,4 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,0,0.893922188854576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0.382067028739756,0.410502947249729,0.236132343941038,0.786728553697808,0.383829398097213,0.464448369948228,0,0,0,0.619737604642413,0,0.293600439334847,0.553995408531877,0,0,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0,0.512321413058201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0,0,0,0,0.150176892841506,0.16072558669708,0,0,0,0,0,0.889509253863555,3.41384178053206,0.800791974072025,0.574752439954483,0.661044872784862,0.954053754535364,1.1384259382189,0,0.382273228125229,1.32171328579026,0.560508562981536,0.526768169550154,1.37696839079683,1.57204305099666,1.02800749499755,0,3.2592226663359,1.89379122293893,0,0.111410456885174,3.53527088969805,3.98761010250518,2.97884250141517,0.640456598628376,0.130059347559878,0.164437904603676,0.829050053357545,0.289803085735052,1.77943875794473,1.87278579662799,1.04535523804977,0.226618685395132,2.68254345521345,1.71813722741315,1.51811815211702,2.22995790026868,1.30216690771284,1.90090408889675,0.752875595388864,1.27986611154418,1.24930726552346,0.473554504088034,0,0.403213486449465,0,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.130979075497713,0,0,0,0,0,2.8618874916641,4.57595928624102,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0.300091096084402,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,2.07355300420312,0.927708378250397,1.2781333715647,0.829288440122964,0.756962552626885,0,0,0,0,0,0,0.236613600079688,0.842923450390509,0.241011029883482,0.220587945464788,0.435758888184812,0.949082476444386,0.539325232640658,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,2.20731549707325,0,0,0,0,0,0,0,0,0,0.115930404975077,0.117408694235822,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0.591092280605782,0.431255149719035,0.513372145118994,0,0,0,1.00509759200609,0,0,0,0,0,0,0,0.623912584592421,0.178428988797162,0.473107245101804,0.234282829985426,0,0,0,0,0,0.0868836144680828,0,0,0,0.431428401637234,0.960548020230999,0.303127571446259,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0.120859449591622,0,0.0920809889358963,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0.66343897524122,0,0,0,0,0,0,0,0,0,0,0,0,0.379473173765715,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,0.79312517629427,0,0,0,0.371606350251437,0.865615277858669,0.569134746787313,1.11598390910176,1.1974762285969,0,0,0.324621940274555,0.280797178113459,0.228234679033192,0,0,0,0.1605880751037,1.21079824314629,0,0,0,0,0.166849141711909,0.390776190804081,0,0,0,0,0,0,0,0.121360521749513,0.334330152832435,0,0,0,0,0,0,0.445234820091624,0.494411622680279,0.422250816255987,0,1.10513566212459,0,0,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0.885741385813839,0.120596438625408,0,0,0,0,0.21787692703798,0,0.230850775511391,0.113942055847001,0,0.269272933229316,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0.432777279484182,0,0.0884575645033392,0,0,0,0,0.134802265961354,0,0.234264445725339,0.547364367646998,0,0,0,0,0,0.063186579628488,0.60129367765797,0.72581733978073,0,0,0,0,0.284609546029793,0,1.73559738335131,0,0,0,0,0.0967563312890851,0.146178634172371,0.0821154570532092,0.193978032976839,0,1.12990370390266,0,0,0.0633107959558787,0,0.0801588202515337,0,0,0,0.114536596165916,1.88754497648161,0.288109595976299,0.124252535565433,1.17847017308398,0.271808412147228,0.104602846312333,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0,0.717873024576814,0,0,0,0,0,0,0.157566364614447,0.0824158583811665,0.404421263125109,0.0984274815147488,0.338693328263138,0,0,3.3758161177654,2.88832816854191,2.07720169014593,0.2249738915515,0.77380195455795,0.121499113316049,0,0,0.104909176269996,0.211200673038813,0.35857467866569,0,0,0,0,0,0,0,0,0.082092520749339,0,0.453248366080503,0.293104467356165,1.32506888912221,0,0,0.171086837884329,0,0.320362237703084,0.314408610199332,0,0,0,0.243585196761792,0,0.544017803369474,0,0.306345576763462,0,0,0,0.122026264901963,0,0,0.221858103073705,0.0620964029413835,1.38348634936231,0,0,0,0,0.468334905806882,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0.214441591374926,0.260994291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| 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| ||
|short_description=p9@TTC39C | |||
}} | }} |
Latest revision as of 00:31, 19 September 2015
Short description: | p9@TTC39C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_TTC39C_5end |
Coexpression cluster: | NA |
Association with transcript: | -181bp_to_ENST00000317571, NM_001135993, NM_001243425, uc002kuv.2, uc002kuw.2_5end |
EntrezGene: | TTC39C |
HGNC: | 26595 |
UniProt: | Q8N584 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.68e-23 | 18 |
alpha-beta T cell | 4.68e-23 | 18 |
immature T cell | 4.68e-23 | 18 |
mature T cell | 4.68e-23 | 18 |
immature alpha-beta T cell | 4.68e-23 | 18 |
CD4-positive, alpha-beta T cell | 1.92e-22 | 6 |
T cell | 6.49e-19 | 25 |
pro-T cell | 6.49e-19 | 25 |
plasmacytoid dendritic cell | 8.13e-13 | 3 |
naive T cell | 8.79e-13 | 3 |
lymphoid lineage restricted progenitor cell | 7.50e-11 | 52 |
lymphocyte | 1.38e-10 | 53 |
common lymphoid progenitor | 1.38e-10 | 53 |
neuron | 2.18e-10 | 6 |
neuroblast | 2.18e-10 | 6 |
electrically signaling cell | 2.18e-10 | 6 |
regulatory T cell | 3.58e-09 | 2 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.58e-09 | 2 |
naive regulatory T cell | 3.58e-09 | 2 |
CD8-positive, alpha-beta T cell | 2.98e-08 | 11 |
neuronal stem cell | 8.54e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
thymus | 4.49e-09 | 4 |
hemolymphoid system gland | 4.49e-09 | 4 |
thymic region | 4.49e-09 | 4 |
pharyngeal gland | 4.49e-09 | 4 |
thymus primordium | 4.49e-09 | 4 |