FFCP PHASE1:Hg19::chr17:76921459..76921478,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:76921459..76921478,- to FFCP PHASE1:Hg19::chr17:76921459..76921478,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7077 | |EntrezGene=7077 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11821 | |HGNC=11821 | ||
|TSSclassifier=strong | |||
|UniProt=P16035 | |UniProt=P16035 | ||
|association_with_transcript=0bp_to_ENST00000262768,NM_003255,uc002jwf.2_5end | |||
|cluster_id=chr17:76921459..76921478,- | |||
|description=CAGE_peak_1_at_TIMP2_5end | |||
|id=chr17:76921459..76921478,- | |||
|ontology_enrichment_celltype=CL:0000055!9.36e-29!180;CL:0000057!1.95e-17!75;CL:0000222!2.27e-16!119;CL:0000183!1.88e-11!59;CL:0000192!1.15e-10!42;CL:0000514!1.15e-10!42;CL:0000680!2.82e-10!57;CL:0000056!2.82e-10!57;CL:0000355!2.82e-10!57;CL:0000187!6.03e-10!54;CL:0000048!1.12e-08!430;CL:0000359!7.49e-08!32;CL:0000393!1.82e-07!60;CL:0000211!1.82e-07!60;CL:0000723!2.00e-07!436;CL:0000136!4.56e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000134;1.14e-08;55!CL:0000192;2.05e-08;43!CL:0000048;7.92e-08;58!CL:0000057;1.28e-07;73!CL:0000359;1.31e-07;32!CL:0000723;3.46e-07;61!CL:0002320;6.27e-07;188!CL:0000136;9.12e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.87e-18,76;CL:0000222,9.34e-17,121;CL:0000192,3.12e-11,43;CL:0000514,3.12e-11,43;CL:0000680,8.67e-11,58;CL:0000056,8.67e-11,58;CL:0000355,8.67e-11,58;CL:0000187,1.85e-10,55;CL:0000048,2.43e-09,427;CL:0000723,4.97e-08,433;CL:0000393,6.64e-08,61;CL:0000211,6.64e-08,61;CL:0000359,7.48e-08,32;CL:0000136,4.55e-07,15;CL:0000034,9.94e-07,441 | |||
|ontology_enrichment_development_v019=CL:0000514;2.05e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!7.06e-14!659;UBERON:0000467!1.23e-12!625;UBERON:0000480!1.71e-12!626;UBERON:0000926!4.79e-12!448;UBERON:0004120!4.79e-12!448;UBERON:0006603!4.79e-12!448;UBERON:0004872!7.76e-12!84;UBERON:0002049!1.08e-11!79;UBERON:0007798!1.08e-11!79;UBERON:0005256!1.89e-10!143;UBERON:0000914!2.26e-10!83;UBERON:0002329!2.26e-10!83;UBERON:0003077!2.26e-10!83;UBERON:0003059!2.26e-10!83;UBERON:0007282!2.26e-10!83;UBERON:0009618!2.26e-10!83;UBERON:0007285!2.26e-10!83;UBERON:0000055!2.65e-10!69;UBERON:0004290!4.42e-10!70;UBERON:0003914!8.72e-10!118;UBERON:0004535!1.93e-09!110;UBERON:0001981!2.19e-09!60;UBERON:0007500!2.19e-09!60;UBERON:0004537!2.19e-09!60;UBERON:0006965!2.19e-09!60;UBERON:0001134!2.73e-09!61;UBERON:0002036!2.73e-09!61;UBERON:0003082!2.73e-09!61;UBERON:0002385!3.38e-09!63;UBERON:0001015!3.38e-09!63;UBERON:0000383!3.38e-09!63;UBERON:0001009!3.45e-09!113;UBERON:0003081!3.75e-09!216;UBERON:0002204!8.41e-09!167;UBERON:0001637!3.66e-08!42;UBERON:0003509!3.66e-08!42;UBERON:0004572!3.66e-08!42;UBERON:0004573!1.59e-07!33;UBERON:0004571!1.59e-07!33;UBERON:0000062!1.70e-07!511;UBERON:0002050!2.41e-07!605;UBERON:0005423!2.41e-07!605;UBERON:0000486!2.61e-07!82;UBERON:0000923!2.82e-07!604;UBERON:0005291!2.82e-07!604;UBERON:0006598!2.82e-07!604;UBERON:0002532!2.82e-07!604;UBERON:0002100!4.13e-07!216;UBERON:0000475!4.47e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;3.18e-07;198!UBERON:0004573;5.10e-07;33!UBERON:0004571;5.10e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000926,2.69e-19,315;UBERON:0004120,2.69e-19,315;UBERON:0006603,2.69e-19,315;UBERON:0004872,2.07e-11,83;UBERON:0007503,2.51e-11,78;UBERON:0002049,2.97e-11,78;UBERON:0007798,2.97e-11,78;UBERON:0007524,1.35e-10,73;UBERON:0002329,1.47e-10,71;UBERON:0003059,1.47e-10,71;UBERON:0007282,1.47e-10,71;UBERON:0004290,1.47e-10,71;UBERON:0009618,1.47e-10,71;UBERON:0003077,1.65e-10,72;UBERON:0007285,1.65e-10,72;UBERON:0000055,7.16e-10,68;UBERON:0005256,8.44e-10,122;UBERON:0001134,9.02e-10,62;UBERON:0002036,9.02e-10,62;UBERON:0003082,9.02e-10,62;UBERON:0002204,9.75e-10,167;UBERON:0002385,1.13e-09,64;UBERON:0001015,1.13e-09,64;UBERON:0000383,1.13e-09,64;UBERON:0003104,1.44e-09,160;UBERON:0009142,1.44e-09,160;UBERON:0003914,2.15e-09,117;UBERON:0004535,4.42e-09,109;UBERON:0007500,5.92e-09,59;UBERON:0001981,5.92e-09,59;UBERON:0004537,5.92e-09,59;UBERON:0006965,5.92e-09,59;UBERON:0001009,7.79e-09,112;UBERON:0003081,8.30e-09,203;UBERON:0001637,3.66e-08,42;UBERON:0003509,3.66e-08,42;UBERON:0004572,3.66e-08,42;UBERON:0000486,1.06e-07,83;UBERON:0004573,1.59e-07,33;UBERON:0004571,1.59e-07,33;UBERON:0000923,3.32e-07,560;UBERON:0010316,3.32e-07,560;UBERON:0005291,3.32e-07,560;UBERON:0006598,3.32e-07,560;UBERON:0010317,3.32e-07,560;UBERON:0002532,3.32e-07,560;UBERON:0002050,8.95e-07,564 | |||
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| ||
|short_description=p1@TIMP2 | |||
}} | }} |
Latest revision as of 23:30, 17 September 2015
Short description: | p1@TIMP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TIMP2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000262768, NM_003255, uc002jwf.2_5end |
EntrezGene: | TIMP2 |
HGNC: | 11821 |
UniProt: | P16035 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.87e-18 | 76 |
mesodermal cell | 9.34e-17 | 121 |
smooth muscle cell | 3.12e-11 | 43 |
smooth muscle myoblast | 3.12e-11 | 43 |
muscle precursor cell | 8.67e-11 | 58 |
myoblast | 8.67e-11 | 58 |
multi-potent skeletal muscle stem cell | 8.67e-11 | 58 |
muscle cell | 1.85e-10 | 55 |
multi fate stem cell | 2.43e-09 | 427 |
somatic stem cell | 4.97e-08 | 433 |
electrically responsive cell | 6.64e-08 | 61 |
electrically active cell | 6.64e-08 | 61 |
vascular associated smooth muscle cell | 7.48e-08 | 32 |
fat cell | 4.55e-07 | 15 |
stem cell | 9.94e-07 | 441 |