FFCP PHASE1:Hg19::chr17:7297833..7297871,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:7297833..7297871,- to FFCP PHASE1:Hg19::chr17:7297833..7297871,-: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57048 | |EntrezGene=57048 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16495 | |HGNC=16495 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NRY6 | |UniProt=Q9NRY6 | ||
|association_with_transcript=0bp_to_ENST00000324822,uc002ggm.1,uc002ggn.1,uc002ggo.1,uc002ggp.1,uc002ggq.1_5end | |||
|cluster_id=chr17:7297833..7297871,- | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_2_at_PLSCR3_5end | |||
|id=chr17:7297833..7297871,- | |||
|ontology_enrichment_celltype=CL:0000055!3.34e-21!180;CL:0000222!3.83e-21!119;CL:0000183!6.70e-17!59;CL:0002371!1.44e-15!591;CL:0000220!4.70e-15!246;CL:0000680!1.17e-14!57;CL:0000056!1.17e-14!57;CL:0000355!1.17e-14!57;CL:0002321!1.58e-14!248;CL:0000187!2.28e-14!54;CL:0000144!3.86e-13!625;CL:0000192!4.77e-13!42;CL:0000514!4.77e-13!42;CL:0000057!1.87e-12!75;CL:0000393!9.81e-12!60;CL:0000211!9.81e-12!60;CL:0000359!2.03e-11!32;CL:0000003!3.67e-10!722;CL:0000548!1.13e-09!679;CL:0000004!1.13e-09!679;CL:0000255!1.13e-09!679;CL:0000012!6.73e-09!682;CL:0002078!3.06e-07!44;CL:1000449!4.22e-07!16;CL:0000213!9.77e-07!57;CL:0000215!9.77e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.06e-11;32!CL:0000192;4.17e-10;43!CL:0000187;2.50e-08;55!CL:1000449;9.46e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,6.12e-22,121;CL:0002321,3.94e-15,250;CL:0000680,5.10e-15,58;CL:0000056,5.10e-15,58;CL:0000355,5.10e-15,58;CL:0000187,9.95e-15,55;CL:0000192,2.08e-13,43;CL:0000514,2.08e-13,43;CL:0000057,6.31e-13,76;CL:0000393,4.51e-12,61;CL:0000211,4.51e-12,61;CL:0000359,2.03e-11,32;CL:0002078,1.31e-07,45;CL:0000213,4.56e-07,58;CL:0000215,4.56e-07,58;CL:0000115,8.49e-07,36;CL:1000449,9.59e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;4.17e-10;43!CL:0000355;3.17e-08;58!CL:0000222;9.13e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.94e-17!79;UBERON:0007798!1.94e-17!79;UBERON:0004872!1.25e-16!84;UBERON:0004535!2.66e-16!110;UBERON:0000486!2.75e-16!82;UBERON:0000055!4.19e-16!69;UBERON:0001009!1.47e-15!113;UBERON:0000914!2.49e-15!83;UBERON:0002329!2.49e-15!83;UBERON:0003077!2.49e-15!83;UBERON:0003059!2.49e-15!83;UBERON:0007282!2.49e-15!83;UBERON:0009618!2.49e-15!83;UBERON:0007285!2.49e-15!83;UBERON:0001981!8.71e-15!60;UBERON:0007500!8.71e-15!60;UBERON:0004537!8.71e-15!60;UBERON:0006965!8.71e-15!60;UBERON:0004290!1.04e-14!70;UBERON:0003914!3.73e-14!118;UBERON:0005256!3.99e-14!143;UBERON:0001637!1.12e-13!42;UBERON:0003509!1.12e-13!42;UBERON:0004572!1.12e-13!42;UBERON:0001134!1.49e-13!61;UBERON:0002036!1.49e-13!61;UBERON:0003082!1.49e-13!61;UBERON:0002385!1.28e-12!63;UBERON:0001015!1.28e-12!63;UBERON:0000383!1.28e-12!63;UBERON:0002100!5.22e-12!216;UBERON:0004573!4.26e-11!33;UBERON:0004571!4.26e-11!33;UBERON:0000490!1.73e-10!138;UBERON:0003104!2.95e-07!238;UBERON:0009142!2.95e-07!238;UBERON:0004211!4.22e-07!16;UBERON:0001285!4.22e-07!16;UBERON:0007684!4.22e-07!16;UBERON:0003220!4.22e-07!16;UBERON:0004208!4.22e-07!16;UBERON:0000353!5.47e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;4.94e-10;33!UBERON:0004571;4.94e-10;33!UBERON:0001637;7.57e-10;42!UBERON:0003509;7.57e-10;42!UBERON:0004572;7.57e-10;42!UBERON:0003914;5.55e-09;74!UBERON:0007500;1.44e-08;56!UBERON:0001981;1.44e-08;56!UBERON:0004537;1.44e-08;56!UBERON:0000055;6.10e-08;65!UBERON:0002049;1.77e-07;75!UBERON:0007798;1.77e-07;75!UBERON:0006555;9.46e-07;15!UBERON:0004819;9.46e-07;15!UBERON:0001285;9.46e-07;15!UBERON:0007684;9.46e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,2.64e-18,78;UBERON:0002049,6.48e-17,78;UBERON:0007798,6.48e-17,78;UBERON:0000486,1.22e-16,83;UBERON:0004872,4.01e-16,83;UBERON:0004535,7.88e-16,109;UBERON:0000055,1.40e-15,68;UBERON:0001009,4.23e-15,112;UBERON:0002329,4.61e-15,71;UBERON:0003059,4.61e-15,71;UBERON:0007282,4.61e-15,71;UBERON:0004290,4.61e-15,71;UBERON:0009618,4.61e-15,71;UBERON:0007524,9.83e-15,73;UBERON:0003077,1.77e-14,72;UBERON:0007285,1.77e-14,72;UBERON:0007500,2.93e-14,59;UBERON:0001981,2.93e-14,59;UBERON:0004537,2.93e-14,59;UBERON:0006965,2.93e-14,59;UBERON:0001134,6.66e-14,62;UBERON:0002036,6.66e-14,62;UBERON:0003082,6.66e-14,62;UBERON:0003914,7.68e-14,117;UBERON:0001637,1.12e-13,42;UBERON:0003509,1.12e-13,42;UBERON:0004572,1.12e-13,42;UBERON:0002385,5.83e-13,64;UBERON:0001015,5.83e-13,64;UBERON:0000383,5.83e-13,64;UBERON:0003104,4.44e-12,160;UBERON:0009142,4.44e-12,160;UBERON:0000490,5.61e-12,148;UBERON:0005256,2.60e-11,122;UBERON:0004573,4.26e-11,33;UBERON:0004571,4.26e-11,33;UBERON:0002100,4.31e-11,199;UBERON:0000926,4.69e-07,315;UBERON:0004120,4.69e-07,315;UBERON:0006603,4.69e-07,315;UBERON:0004211,9.59e-07,15;UBERON:0009773,9.59e-07,15;UBERON:0001231,9.59e-07,15;UBERON:0001285,9.59e-07,15;UBERON:0007684,9.59e-07,15;UBERON:0004208,9.59e-07,15 | |||
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| ||
|short_description=p2@PLSCR3 | |||
}} | }} |
Latest revision as of 09:32, 17 September 2015
Short description: | p2@PLSCR3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PLSCR3_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000324822, uc002ggm.1, uc002ggn.1, uc002ggo.1, uc002ggp.1, uc002ggq.1_5end |
EntrezGene: | PLSCR3 |
HGNC: | 16495 |
UniProt: | Q9NRY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 6.12e-22 | 121 |
embryonic cell | 3.94e-15 | 250 |
muscle precursor cell | 5.10e-15 | 58 |
myoblast | 5.10e-15 | 58 |
multi-potent skeletal muscle stem cell | 5.10e-15 | 58 |
muscle cell | 9.95e-15 | 55 |
smooth muscle cell | 2.08e-13 | 43 |
smooth muscle myoblast | 2.08e-13 | 43 |
fibroblast | 6.31e-13 | 76 |
electrically responsive cell | 4.51e-12 | 61 |
electrically active cell | 4.51e-12 | 61 |
vascular associated smooth muscle cell | 2.03e-11 | 32 |
meso-epithelial cell | 1.31e-07 | 45 |
lining cell | 4.56e-07 | 58 |
barrier cell | 4.56e-07 | 58 |
endothelial cell | 8.49e-07 | 36 |
epithelial cell of nephron | 9.59e-07 | 15 |