FFCP PHASE1:Hg19::chr17:72733350..72733373,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:72733350..72733373,+ to FFCP PHASE1:Hg19::chr17:72733350..72733373,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=326624 | |EntrezGene=326624 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30268 | |HGNC=30268 | ||
|TSSclassifier=strong | |||
|UniProt=A8MTC6,A8MXF5,Q96AX2,E9PMZ4 | |UniProt=A8MTC6,A8MXF5,Q96AX2,E9PMZ4 | ||
|association_with_transcript=0bp_to_ENST00000392610,ENST00000392612,ENST00000392613,ENST00000527040,ENST00000533530,NM_001006638,NM_001163990,uc002jlk.2,uc002jll.3,uc010wre.1_5end | |||
|cluster_id=chr17:72733350..72733373,+ | |||
|coexpression_cluster_id=C3675 | |||
|description=CAGE_peak_2_at_RAB37_5end | |||
|id=chr17:72733350..72733373,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.87e-54!172;CL:0000566!6.87e-54!172;CL:0000988!9.41e-52!182;CL:0002032!4.76e-50!165;CL:0000837!4.76e-50!165;CL:0000738!7.70e-41!140;CL:0002031!1.39e-33!124;CL:0002087!2.60e-32!119;CL:0000763!2.02e-27!112;CL:0000049!2.02e-27!112;CL:0000542!1.32e-20!53;CL:0000051!1.32e-20!53;CL:0000838!1.51e-20!52;CL:0000766!3.62e-18!76;CL:0002057!5.08e-18!42;CL:0000860!1.09e-15!45;CL:0000084!1.73e-15!25;CL:0000827!1.73e-15!25;CL:0000839!1.17e-14!70;CL:0000557!1.14e-13!71;CL:0000791!1.67e-13!18;CL:0000789!1.67e-13!18;CL:0002420!1.67e-13!18;CL:0002419!1.67e-13!18;CL:0000790!1.67e-13!18;CL:0002194!4.27e-11!63;CL:0000576!4.27e-11!63;CL:0000040!4.27e-11!63;CL:0000559!4.27e-11!63;CL:0002009!2.91e-10!65;CL:0000625!3.88e-09!11;CL:0002320!4.68e-09!365;CL:0000134!2.80e-08!358;CL:0000236!9.12e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000084;3.77e-20;25!CL:0000791;2.66e-17;18!CL:0000789;2.66e-17;18!CL:0002419;2.66e-17;18!CL:0000860;1.08e-15;33!CL:0002057;1.08e-15;33!CL:0000542;3.78e-14;53!CL:0002087;3.40e-13;104!CL:0000763;4.46e-13;100!CL:0000576;1.64e-12;48!CL:0000766;7.06e-12;69!CL:0000625;1.53e-11;11!CL:0000988;2.53e-11;177!CL:0000473;3.32e-10;39!CL:0000234;3.32e-10;39!CL:0000738;4.34e-10;136!CL:0000236;2.97e-09;13!CL:0000094;8.77e-08;8!CL:0000097;6.40e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,3.09e-62,168;CL:0000988,1.87e-61,177;CL:0002032,4.46e-59,161;CL:0000837,4.46e-59,161;CL:0000738,3.80e-45,136;CL:0002031,2.87e-40,120;CL:0002087,1.79e-37,115;CL:0000763,1.65e-33,108;CL:0000049,1.65e-33,108;CL:0000838,2.20e-23,52;CL:0000860,2.86e-23,42;CL:0002057,2.86e-23,42;CL:0000542,1.20e-22,53;CL:0000051,1.20e-22,53;CL:0000766,1.59e-22,72;CL:0000084,3.42e-20,25;CL:0000827,3.42e-20,25;CL:0000473,1.17e-18,48;CL:0000234,1.17e-18,48;CL:0000839,6.65e-18,66;CL:0000791,2.63e-17,18;CL:0000789,2.63e-17,18;CL:0002420,2.63e-17,18;CL:0002419,2.63e-17,18;CL:0000790,2.63e-17,18;CL:0000557,6.73e-17,67;CL:0002194,3.16e-13,59;CL:0000576,3.16e-13,59;CL:0000040,3.16e-13,59;CL:0000559,3.16e-13,59;CL:0002009,2.10e-12,61;CL:0002320,1.01e-11,361;CL:0000625,1.50e-11,11;CL:0000134,1.92e-11,354;CL:0000236,5.51e-10,14;CL:0000219,2.90e-08,386;CL:0000094,7.96e-08,8;CL:0002393,1.08e-07,9;CL:0002397,1.08e-07,9;CL:0000097,6.57e-07,5;CL:0002028,6.57e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000790;2.66e-17;18!CL:0002057;6.72e-17;42!CL:0000051;3.78e-14;53!CL:0000049;1.13e-09;108 | |||
|ontology_enrichment_disease=DOID:1240!3.36e-12!39;DOID:8692!1.24e-09!31;DOID:2531!2.80e-09!51;DOID:0060083!2.80e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.40e-10;31!DOID:1240;5.97e-10;39!DOID:2531;2.49e-07;51!DOID:0060083;2.49e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,2.42e-13,39;DOID:8692,1.44e-10,31;DOID:2531,1.47e-10,51;DOID:0060083,1.47e-10,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.51e-21!102;UBERON:0003061!4.51e-21!102;UBERON:0002193!1.01e-18!112;UBERON:0000178!1.68e-11!15;UBERON:0000179!1.68e-11!15;UBERON:0000463!1.68e-11!15;UBERON:0002405!2.72e-11!115;UBERON:0002371!7.13e-11!80;UBERON:0001474!8.26e-10!86;UBERON:0002384!1.37e-08!375;UBERON:0004765!6.05e-07!101;UBERON:0001434!6.05e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.55e-14;15!UBERON:0000179;1.55e-14;15!UBERON:0000463;1.55e-14;15!UBERON:0002390;2.84e-09;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,4.09e-28,98;UBERON:0003061,4.09e-28,98;UBERON:0002193,2.35e-25,108;UBERON:0002405,2.43e-15,93;UBERON:0000178,1.16e-14,15;UBERON:0000179,1.16e-14,15;UBERON:0000463,1.16e-14,15;UBERON:0002371,3.30e-14,76;UBERON:0001474,3.97e-12,82;UBERON:0004765,4.70e-11,90;UBERON:0002384,1.72e-10,371;UBERON:0001434,1.31e-08,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0.218441372130172,0,0.37129905888014,0.662794751455832,0,0,0,0,0,0,0,0,0,0,1.29902789771517,0.738905305049512,0.629686250509434,15.7345710739562,10.747223146722,7.7408061658038,0,0,0,0,0,23.1944347074529,7.75593571944628,10.0272223735071,5.859293509328,0.671746422719773,2.59114932815184,0.257575567634187,3.19876125315042,1.13362783106643,2.66842467306598,3.48643555358527,4.52284676824008,3.40677007984614,5.75384784644301,4.09857130446561,2.83778675866302,3.7922024881028,3.87290810150296,6.77132432971709,3.20011977222428,2.72906150057846,1.79778787556068,1.83650335422542,1.28371610830437,2.55734850319616,2.63881040149373,3.19141852194611,5.11469700639233,2.32167390902867,1.13477044938228,2.4912889959823,3.76872997885115,3.12889751052121,2.38907729175628,4.23779651843358,1.84138817993782,1.58231193720442,6.12640330304631,12.1184450980075,3.77385561915077,2.69588714751588,10.0618518203809,3.37523732063868,9.4054205434612,20.0905843971081,13.3344832248183,5.27988733383968,15.8380197266018,10.6741110463627,9.38806489646316,18.8186113906926,17.2425731986345,14.542987201267,15.2648600725658,20.4916668879401,13.5064553555316,11.0859236156316,52.8685314316103,26.9044110231137,22.1242631211065,5.70458333330116,14.5413982217191,18.7097364089553,13.8764791174263,10.4295125322749,12.3096429491031,19.4826728407911,29.0781292470303,27.9875612101095,27.0271351392018,27.8927979677966,27.0272684621175,30.4338873290115,20.0614243616485,33.4383521520877,22.314837601599,8.00747441075126,12.0393372640371,18.8163942848958,17.3363294327276,15.3288197440768,17.1813722741315,17.7113784413652,19.751055688094,24.7411712465439,30.414465422348,14.9069367886995,19.9659113400893,31.2326816380865,22.4938389441816,19.7070719261051,14.314078768956,27.5463401657013,14.6272647921627,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0,0,0.43917392846563,0.654895377488563,0,0,0,0.174129737299267,0,0.238490624305342,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,15.511210565933,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0.454072282934794,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0.122834317311768,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,1.82960559194393,1.59035721985782,1.85910308591229,0.932949495138334,1.7662459561294,1.45990943630332,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,5.07020139287323,2.94848165003288,0.590789906681404,15.0097453800981,3.93563003337963,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0.858486162094873,0,0,0,0,0,0,0,0,0,18.2285398021499,72.9921517969644,56.39324742709,66.4392985252192,56.4303677415918,0,0,0,0,0,0,0,0.224262168690721,0,0,0,3.57656445851882,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,40.6869072696504,14.7773070151445,26.5221917077206,13.9893909544926,0,0,0,0,0,12.7331194071021,35.899375104483,17.4054515643135,2.57652132610194,2.50085260529839,0.271265023699736,0,0,0,0,0,0,1.03473071292505,0,0,0,2.15381273209015,0,10.958705384513,15.0999940573032,13.9813100722512,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,2.77976734060731,0,0,0,0,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19259876645935,2.0914836081992,0,0,0,1.44257416306811,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.719489830333259,0.54907405947211,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0.92947049429925,0,0,0,0,0,0.633322905892992,0,0,0.349934720244983,0,0,0,1.41215701165169,0,0,0,0,60.3862654986282,55.053878914251,50.6985996585005,37.6406205223307,45.6612123125676,48.6354983394538,50.2229236631447,63.4500141035416,0.106824071127473,0,0,0.371606350251437,0,15.3666381632574,6.85532972733936,11.974762285969,40.7906438381941,21.8023790205599,42.5254741759668,42.9619682513592,49.2986906711695,1.56679895773023,65.1649640434175,35.0433980049319,6.42352300414798,8.475587702024,26.8283129744906,13.0532031007191,0.614481528616916,0.223676107892416,0.166849141711909,14.0679428689469,0,0,14.8750623161791,0,63.4441522895323,0,0.293016358543788,0.121360521749513,6.90948982520366,0,0,0.296964680832639,0,0,0,0,0,0,1.19548792950642,4.69682656402951,10.077309914171,0,0.246169610922139,0,0,0,19.951322438848,1.479651084554,83.8190823214289,0,0,0,0,0,0,0,0,0,0,1.37897349296586,0,0.173624994933292,0,0,1.52581736317083,0.221158519862449,1.18219047581419,0.219385397153973,0,0,0.923403102045565,0,0.922255617552241,0,0.54323685961004,0.31900115973192,0,0,12.2631957834884,8.31995358893631,26.593869104025,0.225595660617181,0,0,0,13.9864189502733,0,0,1.69623685720729,0,0.995261931078505,0.530745387020035,3.66618086960175,1.77912677208373,3.70691816839509,2.8193926366473,0,0,0,1.82454789215666,0,0,0,1.20990716048664,0.30607276163049,1.0741718536843,0.150323419414493,0,1.99396161812156,0,0.627865836814451,1.19472429772959,0.569219092059585,0,0,0,0,0.3494533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| ||
|short_description=p2@RAB37 | |||
}} | }} |
Latest revision as of 08:47, 17 September 2015
Short description: | p2@RAB37 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RAB37_5end |
Coexpression cluster: | C3675_Mast_Whole_blood_acute_NK_Neutrophils_CD34 |
Association with transcript: | 0bp_to_ENST00000392610, ENST00000392612, ENST00000392613, ENST00000527040, ENST00000533530, NM_001006638, NM_001163990, uc002jlk.2, uc002jll.3, uc010wre.1_5end |
EntrezGene: | RAB37 |
HGNC: | 30268 |
UniProt: | A8MTC6A8MXF5Q96AX2E9PMZ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.09e-28 | 98 |
blood island | 4.09e-28 | 98 |
hemolymphoid system | 2.35e-25 | 108 |
immune system | 2.43e-15 | 93 |
blood | 1.16e-14 | 15 |
haemolymphatic fluid | 1.16e-14 | 15 |
organism substance | 1.16e-14 | 15 |
bone marrow | 3.30e-14 | 76 |
bone element | 3.97e-12 | 82 |
skeletal element | 4.70e-11 | 90 |
connective tissue | 1.72e-10 | 371 |
skeletal system | 1.31e-08 | 100 |
Ontology term | p-value | n |
---|---|---|
leukemia | 2.42e-13 | 39 |
myeloid leukemia | 1.44e-10 | 31 |
hematologic cancer | 1.47e-10 | 51 |
immune system cancer | 1.47e-10 | 51 |