FFCP PHASE1:Hg19::chr17:58042483..58042495,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:58042483..58042495,+ to FFCP PHASE1:Hg19::chr17:58042483..58042495,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=26bp_to_ENST00000501190,uc002iye.1_5end | |||
|cluster_id=chr17:58042483..58042495,+ | |||
|coexpression_cluster_id=C538 | |||
|description=CAGE_peak_2_at_ENST00000501190_5end,CAGE_peak_2_at_uc002iye.1_5end | |||
|id=chr17:58042483..58042495,+ | |||
|ontology_enrichment_celltype=CL:0002009!1.03e-17!65;CL:0000557!1.65e-17!71;CL:0000839!1.73e-16!70;CL:0002194!2.67e-16!63;CL:0000576!2.67e-16!63;CL:0000040!2.67e-16!63;CL:0000559!2.67e-16!63;CL:0000766!1.95e-15!76;CL:0000763!5.89e-13!112;CL:0000049!5.89e-13!112;CL:0002057!5.56e-12!42;CL:0000860!1.87e-10!45;CL:0000738!4.07e-07!140;CL:0002031!5.48e-07!124;CL:0000990!6.10e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000235;2.62e-14;6!CL:0000990;1.61e-13;8!CL:0000453;2.25e-11;5!CL:0000451;6.10e-11;10!CL:0000473;1.00e-10;39!CL:0000234;1.00e-10;39!CL:0000136;1.12e-09;13!CL:0000840;1.73e-09;5!CL:0001014;9.21e-08;2!CL:0001016;9.21e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,3.47e-14,6;CL:0002009,1.40e-13,61;CL:0000990,1.42e-13,8;CL:0000557,5.25e-12,67;CL:0000453,1.18e-11,5;CL:0000451,5.52e-11,10;CL:0002194,7.67e-11,59;CL:0000576,7.67e-11,59;CL:0000040,7.67e-11,59;CL:0000559,7.67e-11,59;CL:0000473,7.96e-11,48;CL:0000234,7.96e-11,48;CL:0000840,1.54e-09,5;CL:0001029,1.54e-09,5;CL:0000839,2.47e-09,66;CL:0000763,9.22e-09,108;CL:0000049,9.22e-09,108;CL:0000136,2.35e-08,15;CL:0000766,2.80e-08,72;CL:0001014,4.12e-08,2;CL:0001016,4.12e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.03e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.08e-16!115;UBERON:0002371!9.00e-16!80;UBERON:0001474!1.72e-14!86;UBERON:0002405!3.82e-13!115;UBERON:0002390!4.94e-13!102;UBERON:0003061!4.94e-13!102;UBERON:0004765!1.16e-12!101;UBERON:0001434!1.16e-12!101;UBERON:0002193!3.39e-11!112;UBERON:0000062!2.42e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0005090;2.30e-08;2!UBERON:0001630;2.30e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.08e-10,76;UBERON:0001474,4.33e-09,82;UBERON:0002390,5.10e-09,98;UBERON:0003061,5.10e-09,98;UBERON:0005090,1.61e-08,2;UBERON:0001630,1.61e-08,2;UBERON:0004765,6.10e-08,90;UBERON:0002193,8.79e-08,108;UBERON:0002405,1.46e-07,93;UBERON:0007023,7.38e-07,114;UBERON:0001434,9.01e-07,100 | |||
|phase1_expression=0.181678379270557,1.2846031433459,0,0,0.893922188854576,0,0,0,3.3954131665979,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0,0,0.0821005894499457,0,0.393364276848904,0.383829398097213,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0.223915474239924,0.32389366601898,0,0.726991193897824,0.377875943688809,0.242584061187816,1.16214518452842,4.11167888021826,1.54853185447552,1.43846196161075,0.768482119587302,0.945928919554341,0.689491361473237,0,0,0.752969358170419,0.818718450173537,0.674170453335254,0.918251677112708,1.60464513538047,2.55734850319616,0,0.997318288108159,0.852449501065388,0.290209238628584,0,0.622822248995575,1.00499466102697,1.0429658368404,0.434377689410233,0,1.47311054395026,0.632924774881769,0.211255286311942,0.425208599930087,0,0.112328631146495,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0.294605907474837,0,0,0,0.130059347559878,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0.434539556882471,0,0.486634870302636,0,0,0.087834785693126,0.589405839739707,0,0,0.97364218096405,1.0447784237956,2.12732736830184,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.264818361626438,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0.193260853163297,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.269662616320329,0.196221465125346,0,0,1.40241773803446,0,0,3.80265104465493,0.982827216677626,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,1.58040879591855,0,0.246217006087397,1.63802985597466,1.48631162288728,0.93733833986777,0.16798212819886,0.141775097242386,0,0,0,0.985326475791887,0,0.207328115540772,0,0.25248486685276,0.571481048629521,0,0,0,0.411309970813294,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0,0,0.099972991182057,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0.394061520403854,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,0,0.647142602455851,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0,0,0.131124414959424,0,0,0.784349769176855,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,1.03041011647722,0,0.082509499920588,0,0,0,0.096670718292122,0.616194468458578,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0.941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0.425846237690326,0,0.307240764308458,0.223676107892416,0,0,1.11362469558097,0,0,0.33307196799782,0,0.18714054040822,1.17206543417515,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0,0.511572370226872,0,0,0,0,0,0,0.7812832832557,0.0874599999961957,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0,3.05163472634166,0.110579259931225,0.591095237907095,0.438770794307945,0,0,0,0,0,0.359030577639089,1.4124158349861,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0.421996129056054,0.163232808159148,0.141353071433941,0,0.995261931078505,0.176915129006678,0,0.593042257361244,1.35920332841153,1.77517314159274,0.134802265961354,1.60515529459758,1.40558667435203,0,0,0.242780379534093,0.394584402849391,1.20990716048664,0,0.126373159256976,0,0,0.664653872707185,0,0.941798755221676,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0.0882561266915003,0.677942222341597,0,0.19871461170299,0.0633107959558787,1.17330829640882,0.0801588202515337,0.213452994739353,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.11712960508902,3.43740636017525,0.717873024576814,2.39614800598789,5.57993862577542,0.89268582976749,0.134366944973453,0,0,0.0787831823072236,0.0824158583811665,0.13480708770837,0.0984274815147488,0,0.795229689809303,0.408610218334727,0,0,0,1.799791132412,1.5476039091159,0.121499113316049,0,0.86686278029118,0.104909176269996,0,0,0,3.57347663186684,8.60719561475061,0,0,0,0,0,0,0.340776043570843,0,1.61207457045891,0,0.387848869084652,0.52893040697076,0,0,0.213574825135389,0,0,0,0,0,0,1.63205341010842,5.013797880454,2.75711019087115,4.26234419922746,0,0,0.122026264901963,0.1251909307065,1.72022758707021,0.887432412294818,0.310482014706917,0,0,0,0.570930667089935,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0.176689145945881,0,0,0.256241518587947,0,0,0,2.14346339723327,1.46151324344699,0.817826971279221,0.655219697692825,0.245772908753719,0,0.9999369792746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| 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| ||
|short_description=p2@ENST00000501190,p2@uc002iye.1 | |||
}} | }} |
Latest revision as of 19:30, 25 July 2015
Short description: | p2@ENST00000501190, p2@uc002iye.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000501190_5end, CAGE_peak_2_at_uc002iye.1_5end |
Coexpression cluster: | C538_left_skeletal_heart_seminal_ductus_adipose_mature |
Association with transcript: | 26bp_to_ENST00000501190, uc002iye.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 3.47e-14 | 6 |
macrophage dendritic cell progenitor | 1.40e-13 | 61 |
conventional dendritic cell | 1.42e-13 | 8 |
granulocyte monocyte progenitor cell | 5.25e-12 | 67 |
Langerhans cell | 1.18e-11 | 5 |
dendritic cell | 5.52e-11 | 10 |
monopoietic cell | 7.67e-11 | 59 |
monocyte | 7.67e-11 | 59 |
monoblast | 7.67e-11 | 59 |
promonocyte | 7.67e-11 | 59 |
defensive cell | 7.96e-11 | 48 |
phagocyte | 7.96e-11 | 48 |
immature conventional dendritic cell | 1.54e-09 | 5 |
common dendritic progenitor | 1.54e-09 | 5 |
myeloid lineage restricted progenitor cell | 2.47e-09 | 66 |
myeloid cell | 9.22e-09 | 108 |
common myeloid progenitor | 9.22e-09 | 108 |
fat cell | 2.35e-08 | 15 |
myeloid leukocyte | 2.80e-08 | 72 |
CD1a-positive Langerhans cell | 4.12e-08 | 2 |
immature CD1a-positive Langerhans cell | 4.12e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.08e-10 | 76 |
bone element | 4.33e-09 | 82 |
hematopoietic system | 5.10e-09 | 98 |
blood island | 5.10e-09 | 98 |
muscle structure | 1.61e-08 | 2 |
muscle organ | 1.61e-08 | 2 |
skeletal element | 6.10e-08 | 90 |
hemolymphoid system | 8.79e-08 | 108 |
immune system | 1.46e-07 | 93 |
adult organism | 7.38e-07 | 114 |
skeletal system | 9.01e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.03e-08 | 2 |