FFCP PHASE1:Hg19::chr17:48264177..48264238,+: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr17:48264177..48264238,+ to FFCP PHASE1:Hg19::chr17:48264177..48264238,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:48264177..48264238,+ | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_at_chr17:48264177..48264238,+ | |||
|id=chr17:48264177..48264238,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.59e-34!180;CL:0000057!6.71e-27!75;CL:0000048!7.37e-13!430;CL:0000183!3.94e-12!59;CL:0000723!5.77e-12!436;CL:0000034!2.29e-11!444;CL:0000680!5.48e-11!57;CL:0000056!5.48e-11!57;CL:0000355!5.48e-11!57;CL:0000187!8.13e-11!54;CL:0002371!9.16e-10!591;CL:0002334!1.49e-09!12;CL:0000144!2.80e-09!625;CL:0002620!2.97e-09!23;CL:0000393!5.97e-09!60;CL:0000211!5.97e-09!60;CL:0000192!3.54e-08!42;CL:0000514!3.54e-08!42;CL:0002320!5.61e-08!365;CL:0002570!6.93e-07!8;CL:0000499!9.89e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0000134;3.79e-13;55!CL:0002334;4.27e-12;12!CL:0000723;1.46e-11;61!CL:0000048;1.66e-11;58!CL:0002320;1.84e-10;188!CL:0000057;1.29e-09;73!CL:0000499;8.79e-09;28!CL:0002570;1.11e-08;8!CL:0000034;1.29e-08;69!CL:0002620;1.88e-08;23!CL:0002569;1.39e-07;6!CL:0000327;5.20e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.10e-24,76;CL:0000048,1.96e-18,427;CL:0000723,1.35e-17,433;CL:0000034,1.62e-16,441;CL:0002320,1.24e-14,361;CL:0002334,3.75e-12,12;CL:0000134,3.92e-12,354;CL:0000219,4.63e-10,386;CL:0000499,8.30e-09,28;CL:0002570,1.26e-08,8;CL:0002620,1.93e-08,23;CL:0002569,1.11e-07,6;CL:0000680,1.65e-07,58;CL:0000056,1.65e-07,58;CL:0000355,1.65e-07,58;CL:0000187,3.98e-07,55;CL:0000327,5.47e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;9.02e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.63e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.44e-13!83;UBERON:0002329!1.44e-13!83;UBERON:0003077!1.44e-13!83;UBERON:0003059!1.44e-13!83;UBERON:0007282!1.44e-13!83;UBERON:0009618!1.44e-13!83;UBERON:0007285!1.44e-13!83;UBERON:0004290!7.20e-12!70;UBERON:0002385!1.31e-11!63;UBERON:0001015!1.31e-11!63;UBERON:0000383!1.31e-11!63;UBERON:0001134!2.25e-11!61;UBERON:0002036!2.25e-11!61;UBERON:0003082!2.25e-11!61;UBERON:0005256!2.13e-09!143;UBERON:0000486!2.49e-09!82;UBERON:0001013!2.42e-08!14;UBERON:0002384!4.89e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;1.74e-10;198!UBERON:0001013;1.01e-08;14!UBERON:0003104;1.21e-08;7!UBERON:0009142;1.21e-08;7!UBERON:0003422;1.39e-07;6!UBERON:0004457;1.45e-07;9!UBERON:0000042;1.45e-07;9!UBERON:0003688;4.86e-07;6!UBERON:0002358;4.86e-07;6!UBERON:0003684;4.86e-07;6!UBERON:0001178;4.86e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.61e-15,371;UBERON:0001013,1.11e-08,14;UBERON:0001134,3.21e-08,62;UBERON:0002036,3.21e-08,62;UBERON:0003082,3.21e-08,62;UBERON:0007524,1.04e-07,73;UBERON:0002385,1.07e-07,64;UBERON:0001015,1.07e-07,64;UBERON:0000383,1.07e-07,64;UBERON:0003422,1.11e-07,6;UBERON:0007503,1.49e-07,78;UBERON:0002329,2.13e-07,71;UBERON:0003059,2.13e-07,71;UBERON:0007282,2.13e-07,71;UBERON:0004290,2.13e-07,71;UBERON:0009618,2.13e-07,71;UBERON:0003077,3.56e-07,72;UBERON:0007285,3.56e-07,72;UBERON:0003688,4.81e-07,6;UBERON:0002358,4.81e-07,6;UBERON:0003684,4.81e-07,6;UBERON:0001178,4.81e-07,6;UBERON:0003104,5.45e-07,160;UBERON:0009142,5.45e-07,160 | |||
|phase1_expression=9.99231085988061,6.42301571672949,5.49722175974288,6.00439790118782,8.93922188854576,10.4680622892044,17.7309914717817,0,0.522371256399677,0.245733936501509,0,0.436882744260345,3.16520373874144,3.46545788288131,1.32558950291166,0,0,0.730310090387373,0.487932798790507,2.33930010345897,2.65200898617529,4.07491137921514,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.36560687762909,4.98663991189768,11.5660528763061,2.50668955317945,9.99440980829684,0,6.32625331393427,0.283604451492204,1.55210578223795,1.66886092816939,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.94549513051573,3.41902381494365,3.04541115870403,13.1944845544454,3.54668382198357,5.04609840128076,4.2699598291882,16.7733932923669,0.311211035399766,0.538842688278752,0.490385709340376,3.17850598054356,2.30470369792,0.468642863667593,0.936480230490962,0.570471821544449,1.94283284717341,0,0.323745888736263,0.421352420106746,0,0.859840221182376,0.413303124703062,9.50402285825643,15.3305496152705,0.910161361938026,9.3420358436111,0.673344455816265,0.250237039743928,0,1.75591048352335,13.4854630151569,4.5071417671979,3.85669422744072,6.09924761342131,7.901623386287,5.51022943014861,6.90209520994125,1.64884046781502,5.15281080091258,2.04728541964749,10.6329089311998,1.16924406193438,4.54380793639406,2.85354685791128,2.7479829659198,9.23024940543197,1.5112814734146,2.03472710772585,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,9.00537313470039,0,0.928735856063958,4.33127689001751,0,0,0,0,0,0,0.134831308160164,0.196221465125346,0,0,5.60967095213783,8.231480226628,16.1709582524096,0,0,0,0,0,2.57351715447788,0,0,0,0,1.3032332212413,0,1.44331342025273,0.115930404975077,1.05667824812239,0,0,0,0,0,0,0,0,0,0.503946384596579,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0.448524337381443,1.30788020649984,1.39342743059805,6.85140093516222,7.15312891703765,5.071816515336,2.39344304926383,6.24044621468197,1.80045161983499,4.25547396069835,1.0656887160644,8.00676764485626,16.8212697671347,7.40916303102692,9.12061316022458,14.2156779497018,3.95975936466715,0.904318131178758,0,0.599837947092342,0,0,0,10.7831184971212,14.9320516584348,0,1.44781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,2.08575535922538,3.50119364741774,2.98391526069709,21.4209987376731,18.735043823702,13.5624076929184,4.33423235473039,1.80567659836631,4.5481500811197,3.10419213877515,5.97803038681893,1.29058417979192,1.82455590382974,2.93701736194111,7.89229874764969,0,0,0,0.606255142892519,8.32177197552485,11.4908311465279,7.44323423456331,12.8908057561972,16.8396056659844,7.56020980608636,2.55853624533352,16.2462460355044,10.3892646511494,3.23840356985577,10.1210183428482,1.64254312027618,3.63478100428535,3.25389059687886,0,0.40101294060657,0,3.09999010044438,4.73437036817464,5.63834984325524,0,0.0770153371044148,0,0,0.211103257785751,0,0,0.215915916102139,1.54227252690289,2.16757150035082,2.50844886927427,0,0,0,0,0,0,0.984043937099117,0,0.103041011647722,0.915694648183434,0.907604499126468,0,0,9.64103579064957,0.676695028044854,0.770243085573222,0.614014698904518,0.827019434907183,2.25582514223375,2.61030049045611,0.852266274161009,10.4167481706683,0.165284915360978,0.576570202095319,0,0.10115778085555,1.85938219718914,10.0739950985805,0,2.15623506123262,0,0,1.66791797193528,0,0,0.949138274156178,7.24394736910534,2.04718233049067,0.855877976067841,0.95460974377781,2.35484592059769,1.61885211824983,3.29444435683266,2.70968525395079,0.404364963146632,0,1.26377536871694,4.38870365180631,2.43713489631284,0,4.64099698787152,8.06010962136163,1.13008116620243,1.10273068709225,1.32687795048244,0,1.15755106853338,3.27947376023316,0.608731130888112,1.239293992399,1.40847801266121,2.15117028306077,8.74416465016778,0.7133421029625,1.77380532035299,7.17765960012058,4.93942339439853,1.89736586882858,2.0996083214699,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,5.90975216557434,0,0,0,0.0986434056369336,0,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846452843541768,0.341826167541004,0,0.0897576444097721,0,0,1.83195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,2.4441205797345,0,0,0,0,11.236087062183,0,0,0,0,0,1.20990716048664,0,0.568679216656392,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.34945333648406,0,0.0967563312890851,0,0.0821154570532092,0,0,7.90932592731864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0.558564802544508,0,0,0,0,0,0.806201669840715,5.04419836959365,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419636705079985,0,0,0,0,0,0,0.542999601753713,1.72844298240254,0.979762080328227,0,0,1.02232813071253,0,0,0,0,0,0,0,0,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| 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| ||
|short_description=p@chr17:48264177..48264238,+ | |||
}} | }} |
Latest revision as of 18:33, 25 July 2015
Short description: | p@chr17:48264177..48264238, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:48264177..48264238, + |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.10e-24 | 76 |
multi fate stem cell | 1.96e-18 | 427 |
somatic stem cell | 1.35e-17 | 433 |
stem cell | 1.62e-16 | 441 |
connective tissue cell | 1.24e-14 | 361 |
preadipocyte | 3.75e-12 | 12 |
mesenchymal cell | 3.92e-12 | 354 |
motile cell | 4.63e-10 | 386 |
stromal cell | 8.30e-09 | 28 |
mesenchymal stem cell of adipose | 1.26e-08 | 8 |
skin fibroblast | 1.93e-08 | 23 |
mesenchymal stem cell of umbilical cord | 1.11e-07 | 6 |
muscle precursor cell | 1.65e-07 | 58 |
myoblast | 1.65e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-07 | 58 |
muscle cell | 3.98e-07 | 55 |
extracellular matrix secreting cell | 5.47e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.61e-15 | 371 |
adipose tissue | 1.11e-08 | 14 |
skeletal muscle tissue | 3.21e-08 | 62 |
striated muscle tissue | 3.21e-08 | 62 |
myotome | 3.21e-08 | 62 |
dense mesenchyme tissue | 1.04e-07 | 73 |
muscle tissue | 1.07e-07 | 64 |
musculature | 1.07e-07 | 64 |
musculature of body | 1.07e-07 | 64 |
mesenchyme of umbilical cord | 1.11e-07 | 6 |
epithelial vesicle | 1.49e-07 | 78 |
somite | 2.13e-07 | 71 |
presomitic mesoderm | 2.13e-07 | 71 |
presumptive segmental plate | 2.13e-07 | 71 |
dermomyotome | 2.13e-07 | 71 |
trunk paraxial mesoderm | 2.13e-07 | 71 |
paraxial mesoderm | 3.56e-07 | 72 |
presumptive paraxial mesoderm | 3.56e-07 | 72 |
omentum | 4.81e-07 | 6 |
peritoneum | 4.81e-07 | 6 |
abdominal cavity | 4.81e-07 | 6 |
visceral peritoneum | 4.81e-07 | 6 |
mesenchyme | 5.45e-07 | 160 |
entire embryonic mesenchyme | 5.45e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.63e-07 | 14 |