FFCP PHASE1:Hg19::chr17:46670894..46670923,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46670894..46670923,- to FFCP PHASE1:Hg19::chr17:46670894..46670923,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=120bp_to_AB464575_5end | |||
|cluster_id=chr17:46670894..46670923,- | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_3_at_AB464575_5end | |||
|id=chr17:46670894..46670923,- | |||
|ontology_enrichment_celltype=CL:0000183!1.02e-10!59;CL:0000187!8.56e-10!54;CL:0000680!8.17e-09!57;CL:0000056!8.17e-09!57;CL:0000355!8.17e-09!57;CL:0002539!8.82e-09!10;CL:0000393!1.46e-08!60;CL:0000211!1.46e-08!60;CL:0000192!2.62e-08!42;CL:0000514!2.62e-08!42;CL:0000055!5.04e-08!180;CL:1000449!1.09e-07!16;CL:1000507!2.25e-07!12;CL:1000494!2.25e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.61e-11;10!CL:0002598;2.16e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,2.09e-11,10;CL:0002598,2.33e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0006241;1.43e-11;3!UBERON:0003057;1.43e-11;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!1.44e-14!216;UBERON:0000489!1.26e-11!32;UBERON:0005256!2.72e-11!143;UBERON:0005177!5.26e-11!107;UBERON:0009569!8.95e-10!113;UBERON:0000466!1.14e-09!126;UBERON:0003104!1.39e-09!238;UBERON:0009142!1.39e-09!238;UBERON:0000464!1.78e-09!104;UBERON:0003887!2.35e-09!21;UBERON:0000080!2.96e-09!18;UBERON:0002120!2.96e-09!18;UBERON:0004875!2.96e-09!18;UBERON:0005721!2.96e-09!18;UBERON:0005754!2.96e-09!18;UBERON:0007297!2.96e-09!18;UBERON:0004290!3.03e-09!70;UBERON:0001135!6.36e-09!15;UBERON:0004237!8.82e-09!10;UBERON:0004695!8.82e-09!10;UBERON:0002111!8.82e-09!10;UBERON:0004178!8.82e-09!10;UBERON:0002385!1.23e-08!63;UBERON:0001015!1.23e-08!63;UBERON:0000383!1.23e-08!63;UBERON:0006555!1.29e-08!17;UBERON:0005103!1.29e-08!17;UBERON:0000083!1.29e-08!17;UBERON:0009201!1.29e-08!17;UBERON:0004819!1.29e-08!17;UBERON:0006553!1.29e-08!17;UBERON:0003074!1.29e-08!17;UBERON:0003060!1.29e-08!17;UBERON:0000481!1.52e-08!347;UBERON:0001134!1.80e-08!61;UBERON:0002036!1.80e-08!61;UBERON:0003082!1.80e-08!61;UBERON:0002113!2.88e-08!27;UBERON:0003918!2.88e-08!27;UBERON:0005095!2.88e-08!27;UBERON:0007687!2.88e-08!27;UBERON:0004876!6.55e-08!20;UBERON:0002417!6.57e-08!61;UBERON:0000916!6.57e-08!61;UBERON:0000914!7.87e-08!83;UBERON:0002329!7.87e-08!83;UBERON:0003077!7.87e-08!83;UBERON:0003059!7.87e-08!83;UBERON:0007282!7.87e-08!83;UBERON:0009618!7.87e-08!83;UBERON:0007285!7.87e-08!83;UBERON:0004211!1.09e-07!16;UBERON:0001285!1.09e-07!16;UBERON:0007684!1.09e-07!16;UBERON:0003220!1.09e-07!16;UBERON:0004208!1.09e-07!16;UBERON:0000486!1.17e-07!82;UBERON:0000058!2.11e-07!26;UBERON:0009773!2.25e-07!12;UBERON:0001231!2.25e-07!12;UBERON:0004810!2.25e-07!12;UBERON:0000025!2.52e-07!194;UBERON:0003914!2.53e-07!118;UBERON:0000483!2.66e-07!309;UBERON:0003103!4.28e-07!69;UBERON:0000119!5.11e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002240;1.43e-11;3!UBERON:0005174;1.43e-11;3!UBERON:0001137;1.43e-11;3!UBERON:0004237;1.61e-11;10!UBERON:0004695;1.61e-11;10!UBERON:0002111;1.61e-11;10!UBERON:0004178;1.61e-11;10!UBERON:0001135;1.87e-07;15!UBERON:0000947;8.25e-07;21!UBERON:0010191;8.25e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002240,1.12e-11,3;UBERON:0005174,1.12e-11,3;UBERON:0001137,1.12e-11,3;UBERON:0004237,2.09e-11,10;UBERON:0004695,2.09e-11,10;UBERON:0002111,2.09e-11,10;UBERON:0004178,2.09e-11,10;UBERON:0000025,3.98e-08,192;UBERON:0003076,5.66e-08,15;UBERON:0003057,5.66e-08,15;UBERON:0002100,1.31e-07,199;UBERON:0003104,1.45e-07,160;UBERON:0009142,1.45e-07,160;UBERON:0001135,2.22e-07,15;UBERON:0000489,2.30e-07,31;UBERON:0000483,3.31e-07,306;UBERON:0003914,3.80e-07,117;UBERON:0007503,4.01e-07,78;UBERON:0000119,4.70e-07,309;UBERON:0006555,5.89e-07,16;UBERON:0004819,5.89e-07,16;UBERON:0005256,8.23e-07,122 | |||
|phase1_expression=0,0.642301571672949,0.563817616383885,0,0,0,0,0,0,3.44027511102112,2.09340350391728,0,0,0.123766352960047,0.331397375727916,2.01697543935533,2.41077811209591,1.46062018077475,1.46379839637152,0.492484232307152,2.04000691244253,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0,0.419499436209906,0.275118041940067,0.835979866147242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,1.52664848236894,1.78060238804945,1.54495887372473,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,4.42893272774789,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00068208423871,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,1.95801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.768834895534206,0.511707249066704,0.321707842287215,0,1.07946785661859,0.355123450626254,0.98552587216571,5.71179872101983,1.39452454151951,0,0,0,0,0,0,0.902399225814824,0.385076685522074,1.56869953835371,1.46139224653261,0.105551628892876,0,0.340187410553031,0,1.54227252690289,0,0,0.509752546090077,3.3243040357149,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0.154048617114644,0.460511024178389,0,0,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,5.11330104227014,0.31481234683064,0.6970372701606,0,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0.38126038784765,7.16513815671735,4.2793898803392,0,0,0.359744915166629,0,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,2.89387767133344,0.655894752046633,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.635020748171649,0,0.561594356226918,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0.667852230137435,0,0,0,0.552567831062295,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,1.83309043480088,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,3.55125962564451,0,0,0,0,0.103688191397247,0,0,0,0,0.853828638089378,0.554698692052555,0,0,0,2.27144668714639,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74887830798198,6.52060991875465,0,0.49701014226173,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,1.16495949527454,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0.524545881349981,0.633602019116439,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,1.57204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,1.72022758707021,0.554645257684261,7.8862431735557,0,0.124980407962107,0,0,0,0,1.01444720027578,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,1.36107831386915,0.621748802331122,0.147855149989634,0.318593534327405,0,0.621051827505038,0.829412415681711,0.797525143673985,0,0.450772826991655,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,3.60024988196838,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.4302496591299,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.815636795721981,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,7.30526976407596,0,0,0,0,2.90603563420313,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0.93061915699296,2.8666168169323,0,0.098150233615243,0,0,0,0,0,5.61454712309054,1.59160620129095,0.475680363110274,0.11294608203896,0.109940516745429,9.05777061400041,0.385870790539723,2.84127428655144,0,0,9.42706188406504,12.1711249611266,2.97046400327086,4.6492130034174,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,2.20880187070458,0,0,1.0580536810308,0.743990036333503,0,0,0,0,1.77377901416012,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | |phase1_expression=0,0.642301571672949,0.563817616383885,0,0,0,0,0,0,3.44027511102112,2.09340350391728,0,0,0.123766352960047,0.331397375727916,2.01697543935533,2.41077811209591,1.46062018077475,1.46379839637152,0.492484232307152,2.04000691244253,0.940364164434263,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0.860234595106124,1.04142150482278,0,0.419499436209906,0.275118041940067,0.835979866147242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,1.52664848236894,1.78060238804945,1.54495887372473,0,0,0,0,0,0,1.43723628363248,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,4.42893272774789,0,1.2347220339942,1.47008711385542,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0.57191197463259,0.542621605391443,0,0.65147236858747,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,1.42636905040718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00068208423871,0.542530047399471,0,0,0,0,0,0,1.03473071292505,0,0.368738337083406,0,1.95801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0.280660094433074,0.768834895534206,0.511707249066704,0.321707842287215,0,1.07946785661859,0.355123450626254,0.98552587216571,5.71179872101983,1.39452454151951,0,0,0,0,0,0,0.902399225814824,0.385076685522074,1.56869953835371,1.46139224653261,0.105551628892876,0,0.340187410553031,0,1.54227252690289,0,0,0.509752546090077,3.3243040357149,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,0,0,0.386682873168488,0.154048617114644,0.460511024178389,0,0,0.145016693914229,0.255679882248303,0.267096106940212,0,0,0,0,5.11330104227014,0.31481234683064,0.6970372701606,0,1.06461206063404,0.869932992075073,0.18532421910392,0,0,0.316379424718726,0.38126038784765,7.16513815671735,4.2793898803392,0,0,0.359744915166629,0,0.706874414074119,0.202182481573316,0,0,0.48763373908959,0,0,0,0,1.13008116620243,0,0,0,2.89387767133344,0.655894752046633,0,0,0.563391205064483,0.286822704408103,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.635020748171649,0,0.561594356226918,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13654458722565,0,0,0,0,0,0.667852230137435,0,0,0,0.552567831062295,0,0.306806047506464,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,1.44999915086959,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0.108647371922008,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,1.83309043480088,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0,3.55125962564451,0,0,0,0,0.103688191397247,0,0,0,0,0.853828638089378,0.554698692052555,0,0,0,2.27144668714639,0.51595809741485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.74887830798198,6.52060991875465,0,0.49701014226173,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720599767084807,1.16495949527454,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.315222829196793,0.524545881349981,0.633602019116439,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0,0,0,0,1.57204305099666,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,1.72022758707021,0.554645257684261,7.8862431735557,0,0.124980407962107,0,0,0,0,1.01444720027578,0.74627401443437,0.701139929541673,0.554805861502613,0,0,0,0.228840068396924,1.36107831386915,0.621748802331122,0.147855149989634,0.318593534327405,0,0.621051827505038,0.829412415681711,0.797525143673985,0,0.450772826991655,0.380805212168795,0.406870733204662,0,0.214821114084977,0,0,3.60024988196838,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,42.4302496591299,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0.690359926060101,0.198916222116275,0.225630985047772,0,0,0,0,0,0.202612753855184,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.815636795721981,0,0.118193840883968,0,0.156986185701028,0,0.280272163313789,7.30526976407596,0,0,0,0,2.90603563420313,0,0,0,0,0,0,0.118332000730565,0.255640214277473,0.423387050190929,0,0.93061915699296,2.8666168169323,0,0.098150233615243,0,0,0,0,0,5.61454712309054,1.59160620129095,0.475680363110274,0.11294608203896,0.109940516745429,9.05777061400041,0.385870790539723,2.84127428655144,0,0,9.42706188406504,12.1711249611266,2.97046400327086,4.6492130034174,0,0.187967835959707,0.0644578879735772,0,0,0,0,0,0.458729283404541,0,2.20880187070458,0,0,1.0580536810308,0.743990036333503,0,0,0,0,1.77377901416012,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0.215166616178029,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0,0,0 | ||
|short_description=p3@AB464575 | |||
}} | }} |
Latest revision as of 18:09, 25 July 2015
Short description: | p3@AB464575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_AB464575_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 120bp_to_AB464575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 2.09e-11 | 10 |
bronchial smooth muscle cell | 2.33e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
spinal cord | 1.12e-11 | 3 |
dorsal region element | 1.12e-11 | 3 |
dorsum | 1.12e-11 | 3 |
blood vessel smooth muscle | 2.09e-11 | 10 |
arterial system smooth muscle | 2.09e-11 | 10 |
artery smooth muscle tissue | 2.09e-11 | 10 |
aorta smooth muscle tissue | 2.09e-11 | 10 |
tube | 3.98e-08 | 192 |
posterior neural tube | 5.66e-08 | 15 |
chordal neural plate | 5.66e-08 | 15 |
trunk | 1.31e-07 | 199 |
mesenchyme | 1.45e-07 | 160 |
entire embryonic mesenchyme | 1.45e-07 | 160 |
smooth muscle tissue | 2.22e-07 | 15 |
cavitated compound organ | 2.30e-07 | 31 |
epithelium | 3.31e-07 | 306 |
epithelial tube | 3.80e-07 | 117 |
epithelial vesicle | 4.01e-07 | 78 |
cell layer | 4.70e-07 | 309 |
excretory tube | 5.89e-07 | 16 |
kidney epithelium | 5.89e-07 | 16 |
trunk mesenchyme | 8.23e-07 | 122 |