FFCP PHASE1:Hg19::chr17:46507644..46507655,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:46507644..46507655,- to FFCP PHASE1:Hg19::chr17:46507644..46507655,-: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8631 | |EntrezGene=8631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15605 | |HGNC=15605 | ||
|TSSclassifier=strong | |||
|UniProt=Q86WV1 | |UniProt=Q86WV1 | ||
|association_with_transcript=-50bp_to_ENST00000336915,NM_001075099,NM_003726,uc002ini.1,uc002inj.1,uc010dbd.1,uc010dbe.1_5end | |||
|cluster_id=chr17:46507644..46507655,- | |||
|description=CAGE_peak_4_at_SKAP1_5end | |||
|id=chr17:46507644..46507655,- | |||
|ontology_enrichment_celltype=CL:0000838!2.54e-33!52;CL:0000542!1.64e-32!53;CL:0000051!1.64e-32!53;CL:0000084!1.57e-22!25;CL:0000827!1.57e-22!25;CL:0000791!8.06e-19!18;CL:0000789!8.06e-19!18;CL:0002420!8.06e-19!18;CL:0002419!8.06e-19!18;CL:0000790!8.06e-19!18;CL:0000738!1.62e-16!140;CL:0002031!1.41e-15!124;CL:0000037!5.61e-14!172;CL:0000566!5.61e-14!172;CL:0002032!2.76e-13!165;CL:0000837!2.76e-13!165;CL:0002087!5.46e-13!119;CL:0002274!1.21e-12!5;CL:0000457!1.21e-12!5;CL:0002191!1.21e-12!5;CL:0000097!1.21e-12!5;CL:0000831!1.21e-12!5;CL:0002028!1.21e-12!5;CL:0000988!1.44e-12!182;CL:0000625!1.73e-12!11;CL:0000163!2.35e-09!9;CL:0000945!1.38e-08!24;CL:0000826!1.38e-08!24;CL:0000623!6.99e-08!3;CL:0000825!6.99e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.18e-26;5!CL:0002032;2.06e-15;1!CL:0002127;2.06e-15;1!CL:0000911;2.06e-15;1!CL:0000557;2.06e-15;1!CL:0000814;2.06e-15;1!CL:0000163;4.05e-15;9!CL:0000084;2.31e-09;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.07e-27,5;CL:0002028,9.07e-27,5;CL:0000163,3.52e-15,9;CL:0002127,3.66e-15,1;CL:0000914,3.66e-15,1;CL:0000911,3.66e-15,1;CL:0000814,3.66e-15,1;CL:0002042,3.66e-15,1;CL:0002039,3.66e-15,1;CL:0002040,3.66e-15,1;CL:0002041,3.66e-15,1;CL:0000084,2.26e-09,25;CL:0000827,2.26e-09,25;CL:0000893,3.08e-08,2;CL:0002489,3.08e-08,2;CL:0000809,3.08e-08,2;CL:0000808,3.08e-08,2;CL:0000894,3.08e-08,2;CL:0000806,3.08e-08,2;CL:0000807,3.08e-08,2;CL:0000805,3.08e-08,2;CL:0002425,3.08e-08,2;CL:0002031,7.72e-07,120;CL:0000838,8.60e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002425;2.31e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!9.60e-10!4;UBERON:0005058!9.60e-10!4;UBERON:0009113!9.60e-10!4;UBERON:0003295!9.60e-10!4;UBERON:0005562!9.60e-10!4 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.472264687882075,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,1.32171328579026,0,0,0.196709770113833,0,0.616804496998528,0.334372990781356,0.977766799900771,0.473447805734733,0,0.779873198196215,0,0,0.812411591295047,0.25618263945135,0.650296737799391,0.164437904603676,0.276350017785848,0.289803085735052,0.741432815810302,1.33770414044857,0,0.453237370790265,0.383220493601921,0,0.506039384039006,0.637130828648193,0.651083453856419,1.90090408889675,0.301150238155546,0.76791966692651,0,0,0,0.403213486449465,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.880484340132261,2.69526550203004,2.73827911492227,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.591092280605782,1.2937654491571,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.738508832766417,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,1.27746588066972,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0.230467975111559,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0.471353094203252,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,2.67964130156179,0,0,0,0,0.839655827868079,0.620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458480434487708,0.328402357799783,0.472264687882075,0.393364276848904,0.383829398097213,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0.574752439954483,0.661044872784862,0,0.569212969109448,0,0,1.32171328579026,0,0,0.196709770113833,0,0.616804496998528,0.334372990781356,0.977766799900771,0.473447805734733,0,0.779873198196215,0,0,0.812411591295047,0.25618263945135,0.650296737799391,0.164437904603676,0.276350017785848,0.289803085735052,0.741432815810302,1.33770414044857,0,0.453237370790265,0.383220493601921,0,0.506039384039006,0.637130828648193,0.651083453856419,1.90090408889675,0.301150238155546,0.76791966692651,0,0,0,0.403213486449465,0.802320587350522,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.880484340132261,2.69526550203004,2.73827911492227,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.591092280605782,1.2937654491571,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13929437434833,0.952927101831156,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0.334330152832435,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0.738508832766417,0,0.359473404589307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04386596391473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.144090417154106,0,0.171594997861965,0,0,0,0,0,0,0,0,0,1.27746588066972,0,1.57732412567589,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213574825135389,0,0,0,0.395223263795889,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0.606965604236632,0.227662191351298,0,0.230467975111559,0,0.0679697329768317,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490751168076215,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470317296361523,0,0.471353094203252,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.757786982182394,2.67964130156179,0,0,0,0,0.839655827868079,0.620747142958579,0,0,0,0,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.201273793591026,0.320568492303233 | ||
|short_description=p4@SKAP1 | |||
}} | }} |
Latest revision as of 06:28, 25 September 2015
Short description: | p4@SKAP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SKAP1_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_ENST00000336915, NM_001075099, NM_003726, uc002ini.1, uc002inj.1, uc010dbd.1, uc010dbe.1_5end |
EntrezGene: | SKAP1 |
HGNC: | 15605 |
UniProt: | Q86WV1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.07e-27 | 5 |
basophil mast progenitor cell | 9.07e-27 | 5 |
endocrine cell | 3.52e-15 | 9 |
innate effector T cell | 3.66e-15 | 1 |
immature NK T cell | 3.66e-15 | 1 |
effector T cell | 3.66e-15 | 1 |
mature NK T cell | 3.66e-15 | 1 |
immature NK T cell stage IV | 3.66e-15 | 1 |
immature NK T cell stage I | 3.66e-15 | 1 |
immature NK T cell stage II | 3.66e-15 | 1 |
immature NK T cell stage III | 3.66e-15 | 1 |
T cell | 2.26e-09 | 25 |
pro-T cell | 2.26e-09 | 25 |
thymocyte | 3.08e-08 | 2 |
double negative thymocyte | 3.08e-08 | 2 |
double-positive, alpha-beta thymocyte | 3.08e-08 | 2 |
DN4 thymocyte | 3.08e-08 | 2 |
DN1 thymic pro-T cell | 3.08e-08 | 2 |
DN2 thymocyte | 3.08e-08 | 2 |
DN3 thymocyte | 3.08e-08 | 2 |
immature single positive thymocyte | 3.08e-08 | 2 |
early T lineage precursor | 3.08e-08 | 2 |
hematopoietic lineage restricted progenitor cell | 7.72e-07 | 120 |
lymphoid lineage restricted progenitor cell | 8.60e-07 | 52 |