FFCP PHASE1:Hg19::chr17:39140549..39140579,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=125115 | |EntrezGene=125115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26707 | |HGNC=26707 | ||
|TSSclassifier=strong | |||
|UniProt=Q6A162 | |UniProt=Q6A162 | ||
|association_with_transcript=0bp_to_ENST00000377755_5end | |||
|cluster_id=chr17:39140549..39140579,- | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_1_at_KRT40_5end | |||
|id=chr17:39140549..39140579,- | |||
|ontology_enrichment_celltype=CL:0002127!2.41e-14!1;CL:0000914!2.41e-14!1;CL:0000911!2.41e-14!1;CL:0000814!2.41e-14!1;CL:0002042!2.41e-14!1;CL:0002039!2.41e-14!1;CL:0002040!2.41e-14!1;CL:0002041!2.41e-14!1;CL:0000893!8.04e-08!2;CL:0002489!8.04e-08!2;CL:0000809!8.04e-08!2;CL:0000808!8.04e-08!2;CL:0000894!8.04e-08!2;CL:0000806!8.04e-08!2;CL:0000807!8.04e-08!2;CL:0000805!8.04e-08!2;CL:0002425!8.04e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0002537;1.83e-14;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.83e-14,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.35e-18;4!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7!DOID:3905;1.04e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.35e-18,4;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7;DOID:3905,1.04e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0007029!5.42e-15!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;2.39e-66;1!UBERON:0000014;8.69e-18;4!UBERON:0000305;9.89e-11;7!UBERON:0005631;6.56e-08;10!UBERON:0000158;6.56e-08;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,2.39e-66,1;UBERON:0000014,8.69e-18,4;UBERON:0000305,9.89e-11,7;UBERON:0004871,1.47e-09,8 | |||
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|short_description=p1@KRT40 | |||
}} | }} |
Latest revision as of 04:18, 20 September 2015
Short description: | p1@KRT40 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT40_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | 0bp_to_ENST00000377755_5end |
EntrezGene: | KRT40 |
HGNC: | 26707 |
UniProt: | Q6A162 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.83e-14 | 5 |
Ontology term | p-value | n |
---|---|---|
surface | 2.39e-66 | 1 |
zone of skin | 8.69e-18 | 4 |
amnion | 9.89e-11 | 7 |
somatic layer of lateral plate mesoderm | 1.47e-09 | 8 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.35e-18 | 4 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |
lung carcinoma | 1.04e-08 | 9 |