FFCP PHASE1:Hg19::chr17:38375631..38375667,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:38375631..38375667,+ to FFCP PHASE1:Hg19::chr17:38375631..38375667,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=147179 | |EntrezGene=147179 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30923 | |HGNC=30923 | ||
|TSSclassifier=strong | |||
|UniProt=A8MWR2 | |UniProt=A8MWR2 | ||
|association_with_transcript=22bp_to_ENST00000394103,ENST00000536600,uc002hui.1,uc010cwx.1_5end | |||
|cluster_id=chr17:38375631..38375667,+ | |||
|description=CAGE_peak_3_at_WIPF2_5end | |||
|id=chr17:38375631..38375667,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.91e-20!57;UBERON:0005068!1.91e-20!57;UBERON:0006241!1.91e-20!57;UBERON:0007135!1.91e-20!57;UBERON:0001017!4.70e-20!82;UBERON:0000955!5.02e-20!69;UBERON:0006238!5.02e-20!69;UBERON:0005743!7.71e-20!86;UBERON:0000073!1.45e-18!94;UBERON:0001016!1.45e-18!94;UBERON:0002616!1.92e-18!59;UBERON:0002780!2.43e-18!41;UBERON:0001890!2.43e-18!41;UBERON:0006240!2.43e-18!41;UBERON:0003075!3.09e-18!86;UBERON:0007284!3.09e-18!86;UBERON:0002346!3.09e-17!90;UBERON:0003080!4.27e-17!42;UBERON:0004121!2.99e-15!169;UBERON:0001893!5.90e-15!34;UBERON:0000033!6.36e-15!123;UBERON:0002020!6.52e-15!34;UBERON:0003528!6.52e-15!34;UBERON:0000153!8.52e-15!129;UBERON:0007811!8.52e-15!129;UBERON:0000924!9.07e-15!173;UBERON:0006601!9.07e-15!173;UBERON:0002791!2.50e-14!33;UBERON:0007023!4.10e-14!115;UBERON:0001869!5.98e-14!32;UBERON:0003056!8.01e-14!61;UBERON:0000956!1.71e-12!25;UBERON:0000203!1.71e-12!25;UBERON:0002619!3.18e-12!22;UBERON:0001950!4.18e-11!20;UBERON:0000062!4.22e-10!511;UBERON:0000025!9.58e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.87e-15;41!UBERON:0001890;1.87e-15;41!UBERON:0000073;3.59e-15;53!UBERON:0002616;3.59e-15;53!UBERON:0001893;6.90e-15;34!UBERON:0002791;1.19e-14;32!UBERON:0002619;1.27e-14;22!UBERON:0001869;2.22e-14;32!UBERON:0003528;2.23e-14;34!UBERON:0002020;2.23e-14;34!UBERON:0000956;2.96e-14;25!UBERON:0000203;2.96e-14;25!UBERON:0001950;3.38e-13;20!UBERON:0000955;5.25e-12;68!UBERON:0001017;5.24e-11;75!UBERON:0001016;1.46e-09;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.92e-26,81;UBERON:0001049,6.67e-26,56;UBERON:0005068,6.67e-26,56;UBERON:0006241,6.67e-26,56;UBERON:0007135,6.67e-26,56;UBERON:0000955,4.27e-25,68;UBERON:0006238,4.27e-25,68;UBERON:0000073,4.35e-25,53;UBERON:0002616,4.35e-25,53;UBERON:0001016,2.19e-23,89;UBERON:0003075,3.59e-23,82;UBERON:0007284,3.59e-23,82;UBERON:0002346,2.35e-21,86;UBERON:0002780,2.85e-21,41;UBERON:0001890,2.85e-21,41;UBERON:0003080,2.85e-21,41;UBERON:0006240,2.85e-21,41;UBERON:0010371,2.91e-20,104;UBERON:0003056,1.46e-17,61;UBERON:0001893,4.08e-17,34;UBERON:0003528,4.60e-17,34;UBERON:0002020,4.60e-17,34;UBERON:0010314,1.94e-16,132;UBERON:0004121,3.40e-16,171;UBERON:0000924,3.40e-16,171;UBERON:0006601,3.40e-16,171;UBERON:0001869,6.94e-16,32;UBERON:0002791,8.64e-16,32;UBERON:0007023,3.48e-15,114;UBERON:0002619,2.98e-14,22;UBERON:0000956,4.65e-14,25;UBERON:0000203,4.65e-14,25;UBERON:0001950,7.07e-13,20;UBERON:0000025,2.80e-07,192 | |||
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| ||
|short_description=p3@WIPF2 | |||
}} | }} |
Latest revision as of 00:24, 20 September 2015
Short description: | p3@WIPF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_WIPF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000394103, ENST00000536600, uc002hui.1, uc010cwx.1_5end |
EntrezGene: | WIPF2 |
HGNC: | 30923 |
UniProt: | A8MWR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system | 5.92e-26 | 81 |
neural tube | 6.67e-26 | 56 |
neural rod | 6.67e-26 | 56 |
future spinal cord | 6.67e-26 | 56 |
neural keel | 6.67e-26 | 56 |
brain | 4.27e-25 | 68 |
future brain | 4.27e-25 | 68 |
regional part of nervous system | 4.35e-25 | 53 |
regional part of brain | 4.35e-25 | 53 |
nervous system | 2.19e-23 | 89 |
neural plate | 3.59e-23 | 82 |
presumptive neural plate | 3.59e-23 | 82 |
neurectoderm | 2.35e-21 | 86 |
regional part of forebrain | 2.85e-21 | 41 |
forebrain | 2.85e-21 | 41 |
anterior neural tube | 2.85e-21 | 41 |
future forebrain | 2.85e-21 | 41 |
ecto-epithelium | 2.91e-20 | 104 |
pre-chordal neural plate | 1.46e-17 | 61 |
telencephalon | 4.08e-17 | 34 |
brain grey matter | 4.60e-17 | 34 |
gray matter | 4.60e-17 | 34 |
structure with developmental contribution from neural crest | 1.94e-16 | 132 |
ectoderm-derived structure | 3.40e-16 | 171 |
ectoderm | 3.40e-16 | 171 |
presumptive ectoderm | 3.40e-16 | 171 |
cerebral hemisphere | 6.94e-16 | 32 |
regional part of telencephalon | 8.64e-16 | 32 |
adult organism | 3.48e-15 | 114 |
regional part of cerebral cortex | 2.98e-14 | 22 |
cerebral cortex | 4.65e-14 | 25 |
pallium | 4.65e-14 | 25 |
neocortex | 7.07e-13 | 20 |
tube | 2.80e-07 | 192 |