FFCP PHASE1:Hg19::chr17:10102207..10102229,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:10102207..10102229,- to FFCP PHASE1:Hg19::chr17:10102207..10102229,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8522 | |EntrezGene=8522 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |HGNC=4169 | ||
|TSSclassifier=strong | |||
|UniProt=O60861,F5H2K0 | |UniProt=O60861,F5H2K0 | ||
|association_with_transcript=-339bp_to_ENST00000323816,ENST00000540214,NM_201433,uc002gmg.1_5end | |||
|cluster_id=chr17:10102207..10102229,- | |||
|coexpression_cluster_id=C1427 | |||
|description=CAGE_peak_7_at_GAS7_5end | |||
|id=chr17:10102207..10102229,- | |||
|ontology_enrichment_celltype=CL:0000557!2.56e-26!71;CL:0000766!3.87e-26!76;CL:0002194!6.57e-26!63;CL:0000576!6.57e-26!63;CL:0000040!6.57e-26!63;CL:0000559!6.57e-26!63;CL:0002057!9.44e-26!42;CL:0000839!1.31e-25!70;CL:0002009!4.91e-24!65;CL:0000860!3.75e-22!45;CL:0000763!5.30e-15!112;CL:0000049!5.30e-15!112;CL:0002087!3.15e-12!119;CL:0000738!1.14e-11!140;CL:0002031!2.16e-11!124;CL:0000037!5.87e-09!172;CL:0000566!5.87e-09!172;CL:0000988!1.51e-08!182;CL:0002032!4.41e-08!165;CL:0000837!4.41e-08!165 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.78e-23;39!CL:0000234;4.78e-23;39!CL:0000860;8.05e-23;33!CL:0002057;8.05e-23;33!CL:0000576;2.52e-20;48!CL:0000766;1.02e-16;69!CL:0000763;1.50e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.18e-35,48;CL:0000234,1.18e-35,48;CL:0000557,1.23e-35,67;CL:0000766,1.86e-35,72;CL:0000839,9.71e-35,66;CL:0002194,1.30e-34,59;CL:0000576,1.30e-34,59;CL:0000040,1.30e-34,59;CL:0000559,1.30e-34,59;CL:0002009,1.35e-32,61;CL:0000860,7.62e-31,42;CL:0002057,7.62e-31,42;CL:0000763,9.24e-23,108;CL:0000049,9.24e-23,108;CL:0002087,1.14e-16,115;CL:0000738,2.07e-16,136;CL:0002031,4.61e-16,120;CL:0000037,5.51e-14,168;CL:0000988,1.60e-13,177;CL:0002032,5.40e-13,161;CL:0000837,5.40e-13,161;CL:0002393,4.11e-07,9;CL:0002397,4.11e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;4.38e-22;42!CL:0000049;3.50e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.93e-22!102;UBERON:0003061!9.93e-22!102;UBERON:0002371!8.85e-21!80;UBERON:0002193!4.08e-20!112;UBERON:0001474!7.76e-19!86;UBERON:0007023!3.23e-16!115;UBERON:0004765!1.51e-14!101;UBERON:0001434!1.51e-14!101;UBERON:0002405!4.62e-14!115;UBERON:0005743!6.36e-13!86;UBERON:0001017!1.00e-11!82;UBERON:0002346!4.16e-11!90;UBERON:0003075!5.76e-11!86;UBERON:0007284!5.76e-11!86;UBERON:0001049!1.33e-10!57;UBERON:0005068!1.33e-10!57;UBERON:0006241!1.33e-10!57;UBERON:0007135!1.33e-10!57;UBERON:0002616!2.56e-10!59;UBERON:0000073!4.55e-10!94;UBERON:0001016!4.55e-10!94;UBERON:0003080!4.57e-10!42;UBERON:0000955!5.92e-10!69;UBERON:0006238!5.92e-10!69;UBERON:0002780!9.65e-10!41;UBERON:0001890!9.65e-10!41;UBERON:0006240!9.65e-10!41;UBERON:0003056!1.81e-09!61;UBERON:0000062!1.84e-09!511;UBERON:0001893!6.53e-09!34;UBERON:0002791!1.66e-08!33;UBERON:0001869!2.26e-08!32;UBERON:0002020!2.43e-08!34;UBERON:0003528!2.43e-08!34;UBERON:0001950!7.14e-08!20;UBERON:0002619!3.97e-07!22;UBERON:0000956!9.53e-07!25;UBERON:0000203!9.53e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;6.64e-09;20!UBERON:0001893;1.88e-08;34!UBERON:0002619;2.86e-08;22!UBERON:0001869;6.04e-08;32!UBERON:0003528;1.25e-07;34!UBERON:0002020;1.25e-07;34!UBERON:0002791;1.31e-07;32!UBERON:0002780;3.59e-07;41!UBERON:0001890;3.59e-07;41!UBERON:0000956;3.63e-07;25!UBERON:0000203;3.63e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.77e-29,76;UBERON:0002390,2.31e-28,98;UBERON:0003061,2.31e-28,98;UBERON:0001474,1.77e-26,82;UBERON:0002405,2.03e-26,93;UBERON:0002193,6.26e-26,108;UBERON:0004765,1.19e-21,90;UBERON:0001434,5.12e-19,100;UBERON:0007023,2.19e-14,114;UBERON:0001017,1.48e-10,81;UBERON:0001049,4.87e-10,56;UBERON:0005068,4.87e-10,56;UBERON:0006241,4.87e-10,56;UBERON:0007135,4.87e-10,56;UBERON:0002780,1.36e-09,41;UBERON:0001890,1.36e-09,41;UBERON:0003080,1.36e-09,41;UBERON:0006240,1.36e-09,41;UBERON:0000073,1.67e-09,53;UBERON:0002616,1.67e-09,53;UBERON:0001893,1.82e-09,34;UBERON:0000955,2.74e-09,68;UBERON:0006238,2.74e-09,68;UBERON:0001950,3.37e-09,20;UBERON:0002346,4.86e-09,86;UBERON:0001869,7.95e-09,32;UBERON:0003528,8.13e-09,34;UBERON:0002020,8.13e-09,34;UBERON:0003075,1.02e-08,82;UBERON:0007284,1.02e-08,82;UBERON:0003056,1.41e-08,61;UBERON:0002619,1.65e-08,22;UBERON:0002791,1.69e-08,32;UBERON:0001016,6.94e-08,89;UBERON:0000479,1.10e-07,773;UBERON:0000956,2.74e-07,25;UBERON:0000203,2.74e-07,25;UBERON:0002204,7.60e-07,167 | |||
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|short_description=p7@GAS7 | |||
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Latest revision as of 14:05, 18 September 2015
Short description: | p7@GAS7 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_GAS7_5end |
Coexpression cluster: | C1427_Mast_Monocytederived_granulocyte_CD14_testicular_Macrophage_acute |
Association with transcript: | -339bp_to_ENST00000323816, ENST00000540214, NM_201433, uc002gmg.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | O60861F5H2K0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.18e-35 | 48 |
phagocyte | 1.18e-35 | 48 |
granulocyte monocyte progenitor cell | 1.23e-35 | 67 |
myeloid leukocyte | 1.86e-35 | 72 |
myeloid lineage restricted progenitor cell | 9.71e-35 | 66 |
monopoietic cell | 1.30e-34 | 59 |
monocyte | 1.30e-34 | 59 |
monoblast | 1.30e-34 | 59 |
promonocyte | 1.30e-34 | 59 |
macrophage dendritic cell progenitor | 1.35e-32 | 61 |
classical monocyte | 7.62e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.62e-31 | 42 |
myeloid cell | 9.24e-23 | 108 |
common myeloid progenitor | 9.24e-23 | 108 |
nongranular leukocyte | 1.14e-16 | 115 |
leukocyte | 2.07e-16 | 136 |
hematopoietic lineage restricted progenitor cell | 4.61e-16 | 120 |
hematopoietic stem cell | 5.51e-14 | 168 |
hematopoietic cell | 1.60e-13 | 177 |
hematopoietic oligopotent progenitor cell | 5.40e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.40e-13 | 161 |
intermediate monocyte | 4.11e-07 | 9 |
CD14-positive, CD16-positive monocyte | 4.11e-07 | 9 |