FFCP PHASE1:Hg19::chr16:88770052..88770065,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:88770052..88770065,- to FFCP PHASE1:Hg19::chr16:88770052..88770065,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=115992 | |EntrezGene=115992 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28856 | |HGNC=28856 | ||
|TSSclassifier=strong | |||
|UniProt=Q96A37 | |UniProt=Q96A37 | ||
|association_with_transcript=-27bp_to_ENST00000541206,NM_001171816_5end | |||
|cluster_id=chr16:88770052..88770065,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_4_at_RNF166_5end | |||
|id=chr16:88770052..88770065,- | |||
|ontology_enrichment_celltype=CL:0000037!2.96e-51!172;CL:0000566!2.96e-51!172;CL:0000988!5.21e-47!182;CL:0002032!5.99e-46!165;CL:0000837!5.99e-46!165;CL:0000738!2.64e-40!140;CL:0002087!1.19e-35!119;CL:0000763!1.06e-31!112;CL:0000049!1.06e-31!112;CL:0002031!2.83e-31!124;CL:0000766!1.57e-25!76;CL:0000084!4.34e-22!25;CL:0000827!4.34e-22!25;CL:0002194!1.21e-20!63;CL:0000576!1.21e-20!63;CL:0000040!1.21e-20!63;CL:0000559!1.21e-20!63;CL:0000791!6.91e-20!18;CL:0000789!6.91e-20!18;CL:0002420!6.91e-20!18;CL:0002419!6.91e-20!18;CL:0000790!6.91e-20!18;CL:0002009!1.61e-19!65;CL:0000839!4.34e-19!70;CL:0000557!8.29e-19!71;CL:0002057!4.13e-18!42;CL:0000860!4.22e-16!45;CL:0000625!2.85e-13!11;CL:0000838!6.84e-13!52;CL:0000542!1.95e-12!53;CL:0000051!1.95e-12!53;CL:0000094!4.35e-09!8;CL:0002393!1.43e-07!9;CL:0002397!1.43e-07!9;CL:0000624!2.14e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000791;9.72e-36;18!CL:0000789;9.72e-36;18!CL:0002419;9.72e-36;18!CL:0000084;6.37e-33;25!CL:0000625;2.04e-23;11!CL:0000094;1.58e-15;8!CL:0000624;2.11e-12;6!CL:0000081;7.79e-11;11!CL:0000542;2.69e-09;53!CL:0000623;7.15e-08;3!CL:0002087;8.80e-08;104!CL:0000898;3.94e-07;3!CL:0000738;4.07e-07;136!CL:0000767;4.10e-07;3!CL:0000226;4.54e-07;3!CL:0000842;4.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.19e-36,18;CL:0000789,7.19e-36,18;CL:0002420,7.19e-36,18;CL:0002419,7.19e-36,18;CL:0000790,7.19e-36,18;CL:0000084,6.36e-33,25;CL:0000827,6.36e-33,25;CL:0000037,4.24e-32,168;CL:0000738,6.74e-32,136;CL:0000988,1.48e-29,177;CL:0002032,8.61e-29,161;CL:0000837,8.61e-29,161;CL:0002087,9.11e-25,115;CL:0000625,1.90e-23,11;CL:0002031,1.67e-20,120;CL:0000838,1.96e-17,52;CL:0000542,5.74e-17,53;CL:0000051,5.74e-17,53;CL:0000094,1.27e-15,8;CL:0000766,2.83e-13,72;CL:0000763,9.13e-13,108;CL:0000049,9.13e-13,108;CL:0000624,1.81e-12,6;CL:0000081,6.69e-11,11;CL:0000623,7.10e-08,3;CL:0000825,7.10e-08,3;CL:0000898,3.67e-07,3;CL:0000767,4.33e-07,3;CL:0000226,4.42e-07,3;CL:0000842,4.42e-07,3;CL:0000860,5.16e-07,42;CL:0002057,5.16e-07,42;CL:0000557,6.25e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;9.72e-36;18!CL:0000051;2.69e-09;53 | |||
|ontology_enrichment_disease=DOID:1240!1.74e-12!39;DOID:8692!3.89e-10!31;DOID:2531!3.69e-09!51;DOID:0060083!3.69e-09!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.11e-27!102;UBERON:0003061!1.11e-27!102;UBERON:0002193!3.79e-26!112;UBERON:0002371!1.12e-15!80;UBERON:0007023!2.26e-14!115;UBERON:0002405!1.36e-13!115;UBERON:0001474!1.71e-13!86;UBERON:0000178!4.55e-11!15;UBERON:0000179!4.55e-11!15;UBERON:0000463!4.55e-11!15;UBERON:0004765!7.82e-10!101;UBERON:0001434!7.82e-10!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.71e-18;15!UBERON:0000179;2.71e-18;15!UBERON:0000463;2.71e-18;15!UBERON:0002390;2.58e-11;32!UBERON:0002193;2.36e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.58e-18,15;UBERON:0000179,2.58e-18,15;UBERON:0000463,2.58e-18,15;UBERON:0002390,4.27e-18,98;UBERON:0003061,4.27e-18,98;UBERON:0002193,1.19e-17,108;UBERON:0002405,3.07e-08,93;UBERON:0002370,4.99e-08,4;UBERON:0005058,4.99e-08,4;UBERON:0009113,4.99e-08,4;UBERON:0003295,4.99e-08,4;UBERON:0005562,4.99e-08,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0.328402357799783,0.393553906568396,5.11373559903575,10.3633937486247,3.40595471295367,0,0,0,0,0,0.293600439334847,4.43196326825502,8.02177789880567,3.47217393145363,1.11957737119962,0.32389366601898,0.257575567634187,1.01778767145695,0,3.39617685662943,0.929716147622738,0.411167888021826,0.619412741790207,0.863077176966451,0,0.47296445977717,1.37898272294647,0,1.35426486594342,0.752969358170419,1.63743690034707,2.02251136000576,2.14258724659632,0,1.27867425159808,0.329851300186716,0,1.70489900213078,0.290209238628584,0,0,1.00499466102697,0.521482918420201,1.08594422352558,1.21079900526674,0.736555271975129,0.632924774881769,0.845021145247767,0.850417199860174,0.209658645508376,0.786300418025466,1.05123824989054,0.32145117339416,0.570025487482497,0.79566670879636,0.547992461293902,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,6.72610275577843,0,3.73748563216283,7.07419372948497,4.93443597598822,13.7092926220356,3.91106719960308,2.8406868344084,1.94826728407911,6.35039604245489,7.65975359434577,3.1014745241707,4.60366568400527,5.37983542847836,9.23421367675135,1.64437904603676,2.21080014228679,4.34704628602579,5.33831627383417,4.81573490561484,2.09071047609954,5.55215779218074,8.04763036564035,2.74901956386104,4.04831507231205,8.28270077242652,9.76625180784628,7.60361635558699,8.2816315492775,8.31912972503719,8.74515085866421,12.0756398542449,6.56902397536837,18.5478203766754,32.6277038855879,13.3238451572175,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0.649094787309367,1.0447784237956,1.46253756570752,0.953962497221368,0.571994910780128,0.74291500265913,0,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,14.495845917967,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,1.63802985597466,0.297262324577456,0,0,0,0,0,0,0,3.43388892651582,0,0,0,0,0,0,0,0,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,2.80212859983818,15.5654300559523,23.9346608094064,12.8343036279748,0,0,0,0,0,2.24702107184155,2.99161459204025,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.65041696654683,3.66714141391649,7.89783927745488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,9.13405696617905,4.58782324285425,7.97506062043828,6.90872148827588,3.29089818468955,9.07862635669804,8.10047155857172,7.9312517629427,0,0,0,0,0,0.355709216742071,4.46393563640703,0.199579371432817,0.957526850661834,2.96343015813436,0,0.842391534340376,1.36940807419915,0.626719583092093,5.01268954180134,0.50787533340481,1.1241165257259,0.403599414382095,0.425846237690326,0.343505344755765,0.307240764308458,0.894704431569664,0.333698283423817,1.36771666781428,0,1.23087398947712,2.16364542780786,0.66614393599564,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,0,0.422008249231538,0,0,0,0.398495976502139,1.38141957765574,0,0,0,0,0,0,0,0.0986434056369336,4.7896618469388,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,3.06579894587209,0.627921025580099,0.997270091400938,0,0,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0.442287822516696,0,0,0,0.104421949505455,0.539209063845416,0,0,0,0,0,0,1.20990716048664,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,1.27746588066972,0,0.788662062837943,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.182248669974074,0,0.157611414598396,0.0524545881349981,0,0,0,1.42939065274673,0,0,0,0,0,0,0.082092520749339,0,0,0,1.32506888912221,0.129282956361551,0.26446520348538,0,0,1.28144895081234,0.314408610199332,1.24271716604159,2.48083010905975,0.197611631897944,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19992437512958,0.640150378164845,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0.247871528518004,0,0,0.0788617450012534,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,0,0,0,0.115525666150338,0,0,0,0.150420656698515,0,0,0,0,0,0.0675375846183947,0,0,0.19024743058172,0,0.548257766857182,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0.0852134047591577,0.423387050190929,0,0,0,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| ||
|short_description=p4@RNF166 | |||
}} | }} |
Latest revision as of 10:00, 18 September 2015
Short description: | p4@RNF166 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RNF166_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | -27bp_to_ENST00000541206, NM_001171816_5end |
EntrezGene: | RNF166 |
HGNC: | 28856 |
UniProt: | Q96A37 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 2.58e-18 | 15 |
haemolymphatic fluid | 2.58e-18 | 15 |
organism substance | 2.58e-18 | 15 |
hematopoietic system | 4.27e-18 | 98 |
blood island | 4.27e-18 | 98 |
hemolymphoid system | 1.19e-17 | 108 |
immune system | 3.07e-08 | 93 |
thymus | 4.99e-08 | 4 |
hemolymphoid system gland | 4.99e-08 | 4 |
thymic region | 4.99e-08 | 4 |
pharyngeal gland | 4.99e-08 | 4 |
thymus primordium | 4.99e-08 | 4 |