FFCP PHASE1:Hg19::chr16:88729201..88729250,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr16:88729201..88729250,- to FFCP PHASE1:Hg19::chr16:88729201..88729250,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4597 | |EntrezGene=4597 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7529 | |HGNC=7529 | ||
|TSSclassifier=strong | |||
|UniProt=Q59G80 | |UniProt=Q59G80 | ||
|association_with_transcript=252bp_to_AB209229_5end | |||
|cluster_id=chr16:88729201..88729250,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_MVD_5end | |||
|id=chr16:88729201..88729250,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:1000746;1.92e-08;7!CL:1000612;1.92e-08;7!CL:0000047;7.03e-08;2!CL:0000650;7.03e-08;2!CL:1000500;7.03e-08;2!CL:1000618;7.03e-08;2!CL:1001318;7.03e-08;2!CL:0002363;7.03e-08;2!CL:0002173;7.03e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000746,1.92e-08,7;CL:1000612,1.92e-08,7;CL:0000650,6.15e-08,2;CL:1000500,6.15e-08,2;CL:1000618,6.15e-08,2;CL:1001318,6.15e-08,2;CL:0002173,6.15e-08,2;CL:0002363,9.19e-08,2;CL:0000008,9.19e-08,2;CL:0000047,1.54e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000008;7.03e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.31e-12!82;UBERON:0005743!4.08e-12!86;UBERON:0002346!5.08e-12!90;UBERON:0000073!1.44e-11!94;UBERON:0001016!1.44e-11!94;UBERON:0002020!1.54e-11!34;UBERON:0003528!1.54e-11!34;UBERON:0002616!2.33e-11!59;UBERON:0001869!4.55e-11!32;UBERON:0003075!7.49e-11!86;UBERON:0007284!7.49e-11!86;UBERON:0000956!1.65e-10!25;UBERON:0000203!1.65e-10!25;UBERON:0001049!2.39e-10!57;UBERON:0005068!2.39e-10!57;UBERON:0006241!2.39e-10!57;UBERON:0007135!2.39e-10!57;UBERON:0000955!2.83e-10!69;UBERON:0006238!2.83e-10!69;UBERON:0001893!4.96e-10!34;UBERON:0002619!6.00e-10!22;UBERON:0002791!1.77e-09!33;UBERON:0000924!3.53e-08!173;UBERON:0006601!3.53e-08!173;UBERON:0001950!3.67e-08!20;UBERON:0002780!5.98e-08!41;UBERON:0001890!5.98e-08!41;UBERON:0006240!5.98e-08!41;UBERON:0000064!8.10e-08!219;UBERON:0000119!8.70e-08!312;UBERON:0003080!1.31e-07!42;UBERON:0003056!1.78e-07!61;UBERON:0000483!2.07e-07!309;UBERON:0004121!2.41e-07!169;UBERON:0000033!4.26e-07!123;UBERON:0000477!6.23e-07!286;UBERON:0000153!9.61e-07!129;UBERON:0007811!9.61e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003891;4.40e-14;4!UBERON:0000074;1.92e-08;7!UBERON:0001229;1.92e-08;7!UBERON:0003566;7.03e-08;2!UBERON:0003567;7.03e-08;2!UBERON:0003838;7.03e-08;2!UBERON:0003586;7.03e-08;2!UBERON:0005169;7.03e-08;2!UBERON:0002321;7.03e-08;2!UBERON:0001777;7.03e-08;2!UBERON:0005215;7.03e-08;2!UBERON:0002303;7.03e-08;2!UBERON:0002319;7.03e-08;2!UBERON:0000473;9.08e-08;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003891,5.03e-14,4;UBERON:0010532,1.92e-08,7;UBERON:0000074,1.92e-08,7;UBERON:0001229,1.92e-08,7;UBERON:0001230,1.92e-08,7;UBERON:0003220,1.92e-08,7;UBERON:0005749,1.92e-08,7;UBERON:0004199,1.92e-08,7;UBERON:0004209,1.92e-08,7;UBERON:0004198,1.92e-08,7;UBERON:0003567,6.15e-08,2;UBERON:0003838,6.15e-08,2;UBERON:0003586,6.15e-08,2;UBERON:0005169,6.15e-08,2;UBERON:0002321,6.15e-08,2;UBERON:0005215,6.15e-08,2;UBERON:0002303,6.15e-08,2;UBERON:0002319,6.15e-08,2;UBERON:0000473,9.08e-08,8;UBERON:0003566,9.19e-08,2;UBERON:0001777,9.19e-08,2;UBERON:0005103,1.70e-07,8;UBERON:0000083,1.70e-07,8;UBERON:0009201,1.70e-07,8;UBERON:0006553,1.70e-07,8;UBERON:0003074,1.70e-07,8;UBERON:0003060,1.70e-07,8;UBERON:0001017,2.64e-07,81;UBERON:0000080,9.37e-07,9;UBERON:0002120,9.37e-07,9;UBERON:0004875,9.37e-07,9;UBERON:0005721,9.37e-07,9;UBERON:0005754,9.37e-07,9;UBERON:0007297,9.37e-07,9 | |||
|phase1_expression=0,0.428201047781966,0,0,0.446961094427288,0,0,0.631719873426831,0.261185628199839,0,0,0,0.263766978228454,0,0,0,0,0,0,0,0.408001382488506,0.313454721478088,0,0.273748850145768,0.125542639594803,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0.142169232487422,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0.552700035571697,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0,0.289648807765598,0,0.670700859703636,0.12786256184353,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.263504357079378,2.94702919869853,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0.208994966536811,0,0,0.33472061276467,0.805658634218294,0,0,0,0,0.17859945656816,0,0.337834441449967,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0.560677600142307,0,0,0.622422070799533,0,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0,0,0.245668634623536,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0.348581828608555,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0.241011029883482,0.220587945464788,0.217879444092406,0.237270619111097,0,0,0.38474715694639,0,0,0.4115740113314,1.47008711385542,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0,0,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0.492663237895943,0.088048434013226,0,0.144119953416961,0.25248486685276,0.063497894292169,0,0,0,0,0,0.285826432630578,0.224262168690721,0,0.07333828582095,0,0,0,0.26593811658487,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,1.30139853857622,1.54657762555539,0.335032530668698,0,0.749007023947182,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0.979005787313703,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0.362578348774867,0,0,0,0,0,0.451199612907412,0.0770153371044148,0,0,0.105551628892876,1.13733384070897,0.340187410553031,0.215915916102139,0,0,1.50506932156456,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0.290033387828457,0.0852266274161009,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0,0,0.539617372749944,0,0.235624804691373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286822704408103,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0.185536196323703,3.99227596002388,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.843992258112108,0,0.141353071433941,0,0,0.0884575645033392,0,0.296521128680622,0.123563938946503,0.208843899010911,0,0.802577647298789,0,0.182454789215666,0,0,0,0,2.14250933141343,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.0882561266915003,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0,0,0,0.0671834724867263,0,0,0,0.0824158583811665,0.0674035438541849,0,0,0.795229689809303,0.681017030557878,0.321506296930038,0,0.83088067605837,0,0,0.546746009922222,0.335434687599266,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0.244052529803926,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0.233713309847224,0,0.189403005275089,0,0,0.457680136793847,0.151230923763239,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0.107410557042488,0,0,0,0,0.336749488765919,0,0.192619830407303,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0.389720617678777,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0.212574920101683,0.123935764259002,0,0,0.0788617450012534,0,0,0,0.321146125482298,0,0,0.615349092722265,2.52071696221718,0.207471757392654,0.161475645631851,0,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0.327543835020193,0,0.202612753855184,0,0.206686796501184,0.19024743058172,1.64092442705466,0,0,0.527613733078862,0,0,0,0,0,0,0,0,0.203909198930495,0.0657727735628491,0.118193840883968,0,0,0.157115589916002,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.233939463462106,0,0,0,0.109940516745429,0,0,0,0,0,0,0,0,1.2679671827502,0,0,0,0.0999411559249289,0,0,0,0.730336388246517,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0,0.109265571963696,0,0.407955318967927,0,0.275684698604535,0,6.06229585745915,12.05838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| ||
|short_description=p3@MVD | |||
}} | }} |
Latest revision as of 09:52, 18 September 2015
Short description: | p3@MVD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MVD_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 252bp_to_AB209229_5end |
EntrezGene: | MVD |
HGNC: | 7529 |
UniProt: | Q59G80 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
glomerular cell | 1.92e-08 | 7 |
kidney corpuscule cell | 1.92e-08 | 7 |
mesangial cell | 6.15e-08 | 2 |
kidney interstitial cell | 6.15e-08 | 2 |
juxtaglomerular complex cell | 6.15e-08 | 2 |
renal interstitial pericyte | 6.15e-08 | 2 |
extraglomerular mesangial cell | 6.15e-08 | 2 |
keratocyte | 9.19e-08 | 2 |
migratory cranial neural crest cell | 9.19e-08 | 2 |
neuronal stem cell | 1.54e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
stroma | 5.03e-14 | 4 |
primitive nephron | 1.92e-08 | 7 |
renal glomerulus | 1.92e-08 | 7 |
renal corpuscle | 1.92e-08 | 7 |
glomerular capsule | 1.92e-08 | 7 |
metanephric mesenchyme | 1.92e-08 | 7 |
glomerular tuft | 1.92e-08 | 7 |
S-shaped body | 1.92e-08 | 7 |
renal vesicle | 1.92e-08 | 7 |
comma-shaped body | 1.92e-08 | 7 |
abdomen connective tissue | 6.15e-08 | 2 |
abdominal segment connective tissue | 6.15e-08 | 2 |
trunk connective tissue | 6.15e-08 | 2 |
interstitial tissue | 6.15e-08 | 2 |
extraglomerular mesangium | 6.15e-08 | 2 |
kidney interstitium | 6.15e-08 | 2 |
juxtaglomerular apparatus | 6.15e-08 | 2 |
mesangium | 6.15e-08 | 2 |
testis | 9.08e-08 | 8 |
head connective tissue | 9.19e-08 | 2 |
substantia propria of cornea | 9.19e-08 | 2 |
mesonephric epithelium | 1.70e-07 | 8 |
mesonephric tubule | 1.70e-07 | 8 |
nephric duct | 1.70e-07 | 8 |
renal duct | 1.70e-07 | 8 |
mesonephric duct | 1.70e-07 | 8 |
pronephric duct | 1.70e-07 | 8 |
central nervous system | 2.64e-07 | 81 |
mesonephros | 9.37e-07 | 9 |
pronephros | 9.37e-07 | 9 |
nephrogenic cord | 9.37e-07 | 9 |
pronephric mesoderm | 9.37e-07 | 9 |
rostral part of nephrogenic cord | 9.37e-07 | 9 |
presumptive pronephric mesoderm | 9.37e-07 | 9 |