FFCP PHASE1:Hg19::chr16:88449385..88449440,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:88449385..88449440,+ to FFCP PHASE1:Hg19::chr16:88449385..88449440,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:88449385..88449440,+ | |||
|description=CAGE_peak_at_chr16:88449385..88449440,+ | |||
|id=chr16:88449385..88449440,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.32e-45!180;CL:0000057!1.76e-22!75;CL:0000183!1.49e-21!59;CL:0000680!2.01e-20!57;CL:0000056!2.01e-20!57;CL:0000355!2.01e-20!57;CL:0000187!8.57e-20!54;CL:0000192!1.47e-18!42;CL:0000514!1.47e-18!42;CL:0000222!5.64e-18!119;CL:0000393!1.61e-17!60;CL:0000211!1.61e-17!60;CL:0000359!2.27e-14!32;CL:0002494!1.09e-08!16;CL:0002321!2.23e-07!248;CL:0000220!2.60e-07!246;CL:0000327!7.85e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.65e-15;32!CL:0000192;4.86e-15;43!CL:0000187;2.39e-12;55!CL:0002494;5.87e-10;16!CL:0000057;1.03e-09;73!CL:0000393;1.39e-09;61!CL:0000211;1.39e-09;61!CL:0000499;1.46e-08;28!CL:0000048;2.46e-08;58!CL:0000134;2.66e-08;55!CL:0000327;6.25e-08;15!CL:0002320;7.40e-08;188!CL:0000723;1.25e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.24e-24,76;CL:0000680,4.51e-23,58;CL:0000056,4.51e-23,58;CL:0000355,4.51e-23,58;CL:0000187,2.55e-22,55;CL:0000192,2.92e-21,43;CL:0000514,2.92e-21,43;CL:0000393,1.08e-18,61;CL:0000211,1.08e-18,61;CL:0000222,2.81e-17,121;CL:0000359,1.31e-16,32;CL:0000048,2.54e-13,427;CL:0000723,2.48e-12,433;CL:0000034,2.54e-11,441;CL:0002494,6.17e-10,16;CL:0000499,1.30e-08,28;CL:0000327,6.17e-08,15;CL:0002321,8.23e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;4.86e-15;43!CL:0000355;2.34e-12;58 | |||
|ontology_enrichment_disease=DOID:2394!3.67e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;1.10e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.19e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.33e-21!83;UBERON:0002329!6.33e-21!83;UBERON:0003077!6.33e-21!83;UBERON:0003059!6.33e-21!83;UBERON:0007282!6.33e-21!83;UBERON:0009618!6.33e-21!83;UBERON:0007285!6.33e-21!83;UBERON:0001134!8.12e-21!61;UBERON:0002036!8.12e-21!61;UBERON:0003082!8.12e-21!61;UBERON:0002385!1.87e-20!63;UBERON:0001015!1.87e-20!63;UBERON:0000383!1.87e-20!63;UBERON:0004290!1.28e-19!70;UBERON:0005256!5.84e-18!143;UBERON:0000475!1.00e-16!365;UBERON:0000486!1.60e-15!82;UBERON:0004872!1.50e-13!84;UBERON:0002100!1.06e-12!216;UBERON:0002049!2.62e-12!79;UBERON:0007798!2.62e-12!79;UBERON:0000119!7.63e-11!312;UBERON:0000481!9.24e-11!347;UBERON:0000490!1.45e-10!138;UBERON:0004535!2.07e-10!110;UBERON:0003914!2.69e-10!118;UBERON:0000483!5.04e-10!309;UBERON:0001637!5.23e-10!42;UBERON:0003509!5.23e-10!42;UBERON:0004572!5.23e-10!42;UBERON:0001009!1.08e-09!113;UBERON:0000055!2.61e-09!69;UBERON:0001981!6.86e-09!60;UBERON:0007500!6.86e-09!60;UBERON:0004537!6.86e-09!60;UBERON:0006965!6.86e-09!60;UBERON:0000477!1.84e-08!286;UBERON:0004573!2.06e-08!33;UBERON:0004571!2.06e-08!33;UBERON:0000468!4.89e-08!659;UBERON:0003104!1.26e-07!238;UBERON:0009142!1.26e-07!238;UBERON:0004111!2.26e-07!241;UBERON:0000948!5.30e-07!24;UBERON:0005498!5.30e-07!24;UBERON:0004140!5.30e-07!24;UBERON:0009881!5.30e-07!24;UBERON:0004141!5.30e-07!24;UBERON:0003084!5.30e-07!24;UBERON:0007005!5.30e-07!24;UBERON:0004139!5.30e-07!24;UBERON:0004291!5.30e-07!24;UBERON:0000025!6.02e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;2.30e-08;33!UBERON:0004571;2.30e-08;33!UBERON:0002384;7.67e-08;198!UBERON:0002385;1.37e-07;31!UBERON:0001015;1.37e-07;31!UBERON:0000383;1.37e-07;31!UBERON:0001637;1.99e-07;42!UBERON:0003509;1.99e-07;42!UBERON:0004572;1.99e-07;42!UBERON:0000948;5.97e-07;22 | |||
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|phase1_expression=6.7221000330106,2.78330681058278,8.59821864985424,3.00219895059391,2.68176656656373,0.872338524100369,2.53299878168311,0.631719873426831,0.261185628199839,4.42321085702716,2.09340350391728,3.71350332621293,4.22027165165526,1.23766352960047,2.65117900582333,4.03395087871065,3.61616716814386,5.84248072309899,4.39139518911456,8.61847406537515,7.34402488479311,5.32873026512749,1.71741592278634,1.50561867580173,2.63639543149086,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0.272906150057846,0.449446968890169,0,0,0.639337125799041,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,2.01210257911091,7.1603034632377,9.03597880961416,14.0374614978049,6.37324683427624,1.5905718941022,3.89307896242109,1.41802225746102,2.88248216701333,1.40535657109002,0.654895377488563,0,0,0,0,0,0,0,0,0.596287222100115,0,0,2.26123176769604,2.51699661725944,0,0.208994966536811,0.775250277507987,1.42306505074684,1.00416183829401,0.805658634218294,0,1.22031028774085,0,0,0.267899184852239,0.44905874525234,0,1.53316637465883,0,0.916008719652036,0,0,0,3.97577561356255,6.45815609489357,9.00382429529888,4.87622255272983,4.61068896857864,10.6528744027038,38.4296384626938,29.8467733584764,6.22422070799533,5.6578482269269,4.90385709340376,5.60022482286246,5.18558332031999,6.09235722767871,0.624320153660641,0,1.79338416662161,0.469737994575059,0.971237666208789,0.702254033511242,3.47062091133319,1.84251475967652,3.61640234115179,27.3240657174872,28.435696867034,23.6641954103887,17.2468354035897,1.34668891163253,2.12701483782339,2.49357703935765,13.608306247306,16.243853177348,16.2257103619125,4.8775838758809,4.30535125653269,5.12537733164562,4.66250182551036,3.60109315301283,4.32820622801443,3.60696756063881,7.44467425326359,4.21940830603166,1.94874010322397,2.27190396819703,5.98324341174946,7.43571861366535,5.32514388774922,1.10827308050404,4.91725717700414,0,0,0,0.609868530647977,1.06023814657188,0.232387885739037,0.310983165046111,0.252320850875628,0,1.56449532329816,0.643240938192885,2.76269842704961,3.71494342425583,0,0,0,0,0,0,0,0,0,0,0,11.2193419042757,19.7555525439072,26.4615680493976,0,0,1.18157981336281,0,0,4.11762744716461,0,0,0,0,7.49359102213747,11.4392826380754,1.44331342025273,1.73895607462615,7.27933904262094,0.433099343283221,1.38895653772983,0,0,1.71697232418975,0,0,0,0,0.335964256397719,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0.205654985406647,0,0,11.2131084345361,7.41132117016576,5.7203862940341,12.2808129969889,7.15312891703765,5.917119267892,5.85063856486715,3.12022310734098,2.57207374262142,1.41849132023278,1.3321108950805,6.29103172095849,3.7983512377401,9.05564370458846,4.56030658011229,6.39705507736582,2.37585561880029,6.33022691825131,2.61460037580088,3.09916272664377,0,0,0,38.1003520231616,22.9723871668228,0,4.1986578933598,2.87666851570537,2.32779252211864,0,0,0,0,1.01637849688985,1.30139853857622,0,0.670065061337395,1.27587750330633,0,0,0,3.80343624329334,2.50085260529839,2.17012018959788,21.0050570146115,9.63516539504674,5.99269177128952,4.4513737697231,1.80567659836631,0,3.10419213877515,8.63493278096067,7.19039757312642,3.64911180765948,8.41944977089785,6.51972505240626,0,0,0.106727557803444,6.66880657181771,9.98612637062982,9.37409909322009,5.21026396419431,4.910783145218,4.49056151092918,5.89440086576224,4.60536524160033,5.30817939773905,2.96836132889982,2.62156479464514,6.5697838365857,2.38168752440047,8.82732529612156,3.60252173225874,0.241718899183244,0.802025881213139,0.0920809889358963,10.5629292311438,12.20010825645,21.1110308084673,0,0.539107359730903,7.0591479225917,0,0.527758144464379,0,1.19065593693561,2.37507507712353,1.54227252690289,3.52230368807009,8.02703638167765,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0.769350375349168,1.64007322849853,1.30151357865721,0,0.824125183365091,0.82509499920588,3.44559322797703,0.650060246036521,1.6068392984416,1.64340221096607,1.3864375540318,1.22802939780904,4.41077031950498,0.859361958946189,2.61030049045611,5.96586391912706,10.4167481706683,0.165284915360978,0.192190067365106,0.255225424989168,0.30347334256665,2.78907329578371,6.2962469366128,7.6674099717666,8.93297382510658,6.91997839412128,7.82939692867565,10.1928320507156,2.57624796135584,6.69885064847401,3.48017367190598,3.24071329670502,11.2595028176987,4.70732886837312,16.2283656442228,12.5591782431877,6.83515338816596,7.41249980287348,6.47968212901275,6.87420437349274,7.92551605865041,5.89761838734574,20.4806170417628,3.41198885483798,6.33900880540533,5.05049672209547,13.4335160356027,11.3008116620243,8.82184549673799,3.3171948762061,3.5076070820301,6.94530641120025,3.27947376023316,9.73969809420979,3.0982349809975,4.7888252430481,6.31009949697827,8.84241369118091,7.133421029625,0.709522128141196,6.12212142363226,4.28083360847872,7.20999030154859,6.29882496440969,0,0.6703022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| ||
|short_description=p@chr16:88449385..88449440,+ | |||
}} | }} |
Latest revision as of 13:18, 25 July 2015
Short description: | p@chr16:88449385..88449440, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:88449385..88449440, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.24e-24 | 76 |
muscle precursor cell | 4.51e-23 | 58 |
myoblast | 4.51e-23 | 58 |
multi-potent skeletal muscle stem cell | 4.51e-23 | 58 |
muscle cell | 2.55e-22 | 55 |
smooth muscle cell | 2.92e-21 | 43 |
smooth muscle myoblast | 2.92e-21 | 43 |
electrically responsive cell | 1.08e-18 | 61 |
electrically active cell | 1.08e-18 | 61 |
mesodermal cell | 2.81e-17 | 121 |
vascular associated smooth muscle cell | 1.31e-16 | 32 |
multi fate stem cell | 2.54e-13 | 427 |
somatic stem cell | 2.48e-12 | 433 |
stem cell | 2.54e-11 | 441 |
cardiocyte | 6.17e-10 | 16 |
stromal cell | 1.30e-08 | 28 |
extracellular matrix secreting cell | 6.17e-08 | 15 |
embryonic cell | 8.23e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.19e-07 | 14 |