FFCP PHASE1:Hg19::chr16:68842398..68842420,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:68842398..68842420,+ to FFCP PHASE1:Hg19::chr16:68842398..68842420,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=999 | |EntrezGene=999 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1748 | |HGNC=1748 | ||
|TSSclassifier=strong | |||
|UniProt=P12830 | |UniProt=P12830 | ||
|association_with_transcript=-32bp_to_X12790_5end | |||
|cluster_id=chr16:68842398..68842420,+ | |||
|description=CAGE_peak_2_at_CDH1_5end | |||
|id=chr16:68842398..68842420,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.34e-23!254;CL:0002076!2.00e-17!43;CL:0000223!3.14e-16!59;CL:0000039!2.45e-08!7;CL:0000586!2.45e-08!7;CL:0002251!2.80e-08!21;CL:0002077!4.00e-07!33;CL:0002368!4.10e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.33e-12;42!CL:0000039;6.28e-11;7!CL:0000586;6.28e-11;7!CL:0002231;1.78e-08;3!CL:0002368;1.29e-07;13!CL:0002541;1.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.93e-16,42;CL:0000223,3.64e-13,58;CL:0000066,2.76e-11,253;CL:0000039,4.70e-11,7;CL:0000586,4.70e-11,7;CL:0002231,1.94e-08,3;CL:0002541,1.10e-07,3;CL:0002368,1.31e-07,13;CL:0002166,8.87e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000223;1.92e-08;58 | |||
|ontology_enrichment_disease=DOID:305!5.83e-14!106;DOID:0050687!9.09e-10!143;DOID:299!1.41e-08!25 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.03e-20!169;UBERON:0000925!8.03e-20!169;UBERON:0006595!8.03e-20!169;UBERON:0001007!2.13e-15!155;UBERON:0001555!2.13e-15!155;UBERON:0007026!2.13e-15!155;UBERON:0004921!3.31e-13!129;UBERON:0004185!3.31e-13!129;UBERON:0005911!2.71e-12!82;UBERON:0000466!3.01e-12!126;UBERON:0000077!7.45e-12!130;UBERON:0000464!1.92e-11!104;UBERON:0001004!2.52e-09!72;UBERON:0005177!1.60e-08!107;UBERON:0005153!2.84e-08!37;UBERON:0001041!1.07e-07!98;UBERON:0000161!1.16e-07!35;UBERON:0005631!1.23e-07!14;UBERON:0000158!1.23e-07!14;UBERON:0003101!1.33e-07!22;UBERON:0000079!1.33e-07!22;UBERON:0005156!7.98e-07!59;UBERON:0000990!7.98e-07!59;UBERON:0003929!9.40e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.33e-07;3!UBERON:0000920;1.33e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,5.15e-10,160;UBERON:0000925,5.15e-10,160;UBERON:0006595,5.15e-10,160;UBERON:0000920,1.10e-07,3;UBERON:0001007,2.32e-07,145;UBERON:0001555,2.32e-07,145;UBERON:0007026,2.32e-07,145;UBERON:0005911,6.15e-07,82 | |||
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| ||
|short_description=p2@CDH1 | |||
}} | }} |
Latest revision as of 14:12, 17 September 2015
Short description: | p2@CDH1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_CDH1_5end |
Coexpression cluster: | NA |
Association with transcript: | -32bp_to_X12790_5end |
EntrezGene: | CDH1 |
HGNC: | 1748 |
UniProt: | P12830 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.93e-16 | 42 |
endodermal cell | 3.64e-13 | 58 |
epithelial cell | 2.76e-11 | 253 |
germ line cell | 4.70e-11 | 7 |
germ cell | 4.70e-11 | 7 |
epithelial cell of prostate | 1.94e-08 | 3 |
chorionic membrane mesenchymal stem cell | 1.10e-07 | 3 |
respiratory epithelial cell | 1.31e-07 | 13 |
epithelial cell of Malassez | 8.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 5.15e-10 | 160 |
endoderm | 5.15e-10 | 160 |
presumptive endoderm | 5.15e-10 | 160 |
egg chorion | 1.10e-07 | 3 |
digestive system | 2.32e-07 | 145 |
digestive tract | 2.32e-07 | 145 |
primitive gut | 2.32e-07 | 145 |
endo-epithelium | 6.15e-07 | 82 |