FFCP PHASE1:Hg19::chr16:67312116..67312130,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:67312116..67312130,+ to FFCP PHASE1:Hg19::chr16:67312116..67312130,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25894 | |EntrezGene=25894 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24501 | |HGNC=24501 | ||
|TSSclassifier=strong | |||
|UniProt=Q58EX7 | |UniProt=Q58EX7 | ||
|association_with_transcript=40bp_to_NM_001129727,uc002esq.3_5end | |||
|cluster_id=chr16:67312116..67312130,+ | |||
|description=CAGE_peak_4_at_PLEKHG4_5end | |||
|id=chr16:67312116..67312130,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.72e-32!180;CL:0000057!9.11e-25!75;CL:0002620!2.92e-15!23;CL:0000222!1.88e-13!119;CL:0000680!8.20e-12!57;CL:0000056!8.20e-12!57;CL:0000355!8.20e-12!57;CL:0000187!5.00e-11!54;CL:0000183!6.45e-11!59;CL:0000393!5.34e-09!60;CL:0000211!5.34e-09!60;CL:0000048!6.80e-09!430;CL:0002371!2.35e-08!591;CL:0000723!2.42e-08!436;CL:0000359!3.87e-08!32;CL:0000144!5.55e-08!625;CL:0000192!9.29e-08!42;CL:0000514!9.29e-08!42;CL:0000034!1.21e-07!444;CL:0000188!4.11e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000135;5.04e-16;3!CL:0000388;5.04e-16;3!CL:0000499;9.90e-08;28!CL:0000214;1.14e-07;3!CL:0002582;4.06e-07;3!CL:0002620;8.52e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000135,4.62e-16,3;CL:0000388,4.62e-16,3;CL:0000057,7.55e-16,76;CL:0000499,1.11e-07,28;CL:0000214,1.15e-07,3;CL:0002582,4.34e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.45e-19!83;UBERON:0002329!2.45e-19!83;UBERON:0003077!2.45e-19!83;UBERON:0003059!2.45e-19!83;UBERON:0007282!2.45e-19!83;UBERON:0009618!2.45e-19!83;UBERON:0007285!2.45e-19!83;UBERON:0004290!9.91e-16!70;UBERON:0000486!2.68e-14!82;UBERON:0003102!1.03e-12!95;UBERON:0001981!2.31e-12!60;UBERON:0007500!2.31e-12!60;UBERON:0004537!2.31e-12!60;UBERON:0006965!2.31e-12!60;UBERON:0005256!6.13e-12!143;UBERON:0000055!7.80e-12!69;UBERON:0002049!8.01e-12!79;UBERON:0007798!8.01e-12!79;UBERON:0002199!1.25e-11!45;UBERON:0002416!1.25e-11!45;UBERON:0002385!1.98e-11!63;UBERON:0001015!1.98e-11!63;UBERON:0000383!1.98e-11!63;UBERON:0001134!2.41e-11!61;UBERON:0002036!2.41e-11!61;UBERON:0003082!2.41e-11!61;UBERON:0004872!1.33e-10!84;UBERON:0001637!4.15e-10!42;UBERON:0003509!4.15e-10!42;UBERON:0004572!4.15e-10!42;UBERON:0002097!6.78e-10!40;UBERON:0000490!1.20e-08!138;UBERON:0004535!3.19e-08!110;UBERON:0004573!4.26e-08!33;UBERON:0004571!4.26e-08!33;UBERON:0001009!1.10e-07!113;UBERON:0003914!7.52e-07!118;UBERON:0002067!9.62e-07!9;UBERON:0004016!9.62e-07!9;UBERON:0010083!9.62e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;5.04e-16;3!UBERON:0000043;5.04e-16;3!UBERON:0007845;5.04e-16;3!UBERON:0006915;1.14e-07;3!UBERON:0007616;1.14e-07;3!UBERON:0002217;1.14e-07;3!UBERON:0002018;1.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.62e-16,3;UBERON:0000043,4.62e-16,3;UBERON:0007845,4.62e-16,3;UBERON:0006915,1.15e-07,3;UBERON:0007616,1.15e-07,3;UBERON:0002217,1.15e-07,3;UBERON:0002018,1.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0.261185628199839,0,0,0,0,0.247532705920093,0.331397375727916,0.672325146451775,0,0,0.487932798790507,0.492484232307152,1.83600622119828,0,0,0.821246550437305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0,0,0.221729397462564,0.087834785693126,0,0,0,0,0,0,0,0,0,0.596287222100115,0.860234595106124,0,0,1.67799774483962,0.275118041940067,0,0,0.71153252537342,0,0.402829317109147,0,0,0,0,0.267899184852239,0.44905874525234,0.112611480483322,0,0.949265659568129,0.916008719652036,0,0,0,0.496971951695318,0.12663051166458,3.17782033951725,1.14734648299525,0.354668382198357,1.12135520028461,0,0.24666754841716,0,0,0,0,0,0,1.24864030732128,0.570471821544449,0.298897361103602,0.352303495931295,0.323745888736263,0.280901613404497,0.816616685019573,0.491337269247072,0.413303124703062,0,0.741800787835671,0,0.718618141816238,0.168336113954066,0.250237039743928,0.554128230968366,0.877955241761676,0.612975591598039,0.45071417671979,0.113432183160021,1.07633781413317,0,0.423863802319124,2.10063767259082,0.206105058476878,1.54584324027377,0.930584281657949,1.0126579934476,0,1.51460264546469,0.184099797284599,0.161646056818812,0.355009592516614,0.10075209822764,0.169560592310488,0.193260853163297,0,0,0,0,0,0,0,0,0,0.643240938192885,1.38134921352481,0,0.721879481669586,0.118306800039844,0,0,0,0,0,0,0,0.38474715694639,0,0,0,1.47008711385542,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36669142910475,0.258543431515556,0,0,0.26593811658487,0,0.771622122786426,0,0,0.142977993658148,0,1.64648067356154,0,0.355391948742546,0,0.301439377059586,0,0.199945982364114,0,0,0,0.239624855491583,1.14861935834114,0,0.434343920002738,0.61642896765115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.831883446123229,1.78428988797162,1.26161932027148,0.819989904948992,0.300946099727719,0,1.03473071292505,0.664225598535437,1.47495334833363,0.260650843404249,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.532685175939381,1.64254312027618,0,1.04589340613963,0,0,0.0920809889358963,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0.510281115829547,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183138929636687,0.082509499920588,0,0,0,0.580024309752732,1.07834031980251,0.460511024178389,0.413509717453592,0.966782203814463,0.870100163485371,0.426133137080504,0.445160178233687,0,0,0,0,0.464845549297286,0.31481234683064,0.6970372701606,0.308033580176089,0,0,0.37064843820784,0.143124886741991,0,0.632758849437452,0,0.511795582622668,0.855877976067841,0.318203247925937,0,0,0,0.117812402345686,0.202182481573316,1.58510321173008,0,0,0.974853958525138,0,0,0.141405431953713,0,2.75682671773062,1.32687795048244,0,0.578775534266688,0,0.202910376962704,0.92947049429925,0.281695602532241,0.573645408816206,0.294747123039363,0,0,2.11107635297664,2.30506425071931,0,0.699869440489966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,1.11136990144637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0.138674673013139,0,0,0.174118413160805,0.17472666824203,2.23581842213102,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0.859530882839914,0,0,0.458320848023367,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542999601753713,0.864221491201268,0.653174720218818,0,0,0,0.113312091520126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.467426619694449,1.10961172300523,0,1.76097531226803,0,0.228840068396924,0.453692771289717,0,0.147855149989634,0.159296767163702,0,0,1.24411862352257,0.265841714557995,0,0,0,0,0.181848659202559,0,0,0.398095888698616,0,0.686791410365586,2.02049693259551,0,0,0,0,0,1.62065732026684,0.244736704506468,0,0,0,1.06013487567529,1.15748422962549,1.35153952522458,0,0.345430341731199,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0.567515953566836,0.920529751259204,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0.705351887381368,0,0,0,0,0,0,0,0,0,0,0,0,0,0.762764190934334,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472775363535873,0.111231401892069,0.078493092850514,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0.426067023795788,0,0,0,0,0,0,0.121917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,0,0,0.509781344063451,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,2.60396512716726,5.0839319149456,10.8156640530947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448527450322454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| ||
|short_description=p4@PLEKHG4 | |||
}} | }} |
Latest revision as of 10:26, 17 September 2015
Short description: | p4@PLEKHG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PLEKHG4_5end |
Coexpression cluster: | NA |
Association with transcript: | 40bp_to_NM_001129727, uc002esq.3_5end |
EntrezGene: | PLEKHG4 |
HGNC: | 24501 |
UniProt: | Q58EX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibrocyte | 4.62e-16 | 3 |
tendon cell | 4.62e-16 | 3 |
fibroblast | 7.55e-16 | 76 |
stromal cell | 1.11e-07 | 28 |
synovial cell | 1.15e-07 | 3 |
visceral preadipocyte | 4.34e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.62e-16 | 3 |
tendon | 4.62e-16 | 3 |
regular connective tissue | 4.62e-16 | 3 |
stratified squamous epithelium | 1.15e-07 | 3 |
layer of synovial tissue | 1.15e-07 | 3 |
synovial joint | 1.15e-07 | 3 |
synovial membrane of synovial joint | 1.15e-07 | 3 |