FFCP PHASE1:Hg19::chr16:58497337..58497348,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:58497337..58497348,+ to FFCP PHASE1:Hg19::chr16:58497337..58497348,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=65009 | |EntrezGene=65009 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14466 | |HGNC=14466 | ||
|TSSclassifier=strong | |||
|UniProt=Q9ULP0 | |UniProt=Q9ULP0 | ||
|association_with_transcript=-200bp_to_NM_020465,uc002enk.2_5end | |||
|cluster_id=chr16:58497337..58497348,+ | |||
|coexpression_cluster_id=C751 | |||
|description=CAGE_peak_9_at_NDRG4_5end | |||
|id=chr16:58497337..58497348,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.35e-59;3!UBERON:0004140;2.08e-21;1!UBERON:0010226;5.71e-21;1 | |||
|ontology_enrichment_disease=DOID:114!1.56e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;2.12e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.23e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.09e-45!57;UBERON:0005068!2.09e-45!57;UBERON:0006241!2.09e-45!57;UBERON:0007135!2.09e-45!57;UBERON:0002616!1.31e-43!59;UBERON:0007023!2.50e-41!115;UBERON:0000955!4.72e-38!69;UBERON:0006238!4.72e-38!69;UBERON:0003075!2.13e-36!86;UBERON:0007284!2.13e-36!86;UBERON:0005743!9.00e-36!86;UBERON:0001017!2.05e-35!82;UBERON:0002346!2.18e-34!90;UBERON:0002780!9.69e-34!41;UBERON:0001890!9.69e-34!41;UBERON:0006240!9.69e-34!41;UBERON:0000073!1.33e-33!94;UBERON:0001016!1.33e-33!94;UBERON:0003080!8.24e-33!42;UBERON:0002020!1.62e-24!34;UBERON:0003528!1.62e-24!34;UBERON:0001893!2.85e-24!34;UBERON:0001869!3.44e-23!32;UBERON:0003056!4.54e-23!61;UBERON:0002791!3.72e-22!33;UBERON:0000033!6.19e-21!123;UBERON:0000153!6.27e-21!129;UBERON:0007811!6.27e-21!129;UBERON:0002619!2.65e-20!22;UBERON:0001950!5.97e-19!20;UBERON:0004121!2.29e-18!169;UBERON:0000924!1.00e-17!173;UBERON:0006601!1.00e-17!173;UBERON:0000956!1.33e-17!25;UBERON:0000203!1.33e-17!25;UBERON:0004733!4.04e-17!12;UBERON:0002028!4.04e-17!12;UBERON:0007277!4.04e-17!12;UBERON:0004732!1.10e-15!13;UBERON:0003076!2.17e-13!15;UBERON:0003057!2.17e-13!15;UBERON:0002680!2.46e-13!9;UBERON:0001895!2.46e-13!9;UBERON:0010092!2.46e-13!9;UBERON:0000025!3.13e-13!194;UBERON:0000200!5.04e-13!6;UBERON:0001894!9.91e-12!7;UBERON:0006222!9.91e-12!7;UBERON:0000988!9.76e-11!3;UBERON:0002298!2.37e-10!8;UBERON:0002771!5.62e-10!3;UBERON:0001871!9.48e-10!7;UBERON:0004111!1.11e-09!241;UBERON:0000483!1.09e-08!309;UBERON:0000477!1.14e-08!286;UBERON:0000119!1.65e-08!312;UBERON:0002308!2.13e-08!9;UBERON:0000125!2.13e-08!9;UBERON:0003296!2.31e-08!4;UBERON:0010133!2.31e-08!4;UBERON:0001905!5.45e-08!2;UBERON:0002757!5.45e-08!2;UBERON:0010134!5.45e-08!2;UBERON:0002784!5.45e-08!2;UBERON:0005408!5.45e-08!2;UBERON:0001899!5.45e-08!2;UBERON:0002148!1.56e-07!2;UBERON:0009662!1.56e-07!2;UBERON:0000369!2.95e-07!4;UBERON:0002435!2.95e-07!4;UBERON:0000204!2.95e-07!4;UBERON:0010082!2.95e-07!4;UBERON:0001897!3.06e-07!2;UBERON:0000064!6.71e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0002680;2.33e-35;9!UBERON:0001895;2.33e-35;9!UBERON:0002037;2.92e-30;6!UBERON:0004733;1.15e-26;12!UBERON:0002028;1.15e-26;12!UBERON:0004732;1.18e-24;13!UBERON:0002084;5.71e-21;1!UBERON:0002171;5.71e-21;1!UBERON:0002082;5.71e-21;1!UBERON:0006518;5.71e-21;1!UBERON:0008949;5.71e-21;1!UBERON:0000101;5.71e-21;1!UBERON:0002167;5.71e-21;1!UBERON:0007100;4.15e-13;25!UBERON:0001905;2.12e-11;2!UBERON:0002757;2.12e-11;2!UBERON:0010134;2.12e-11;2!UBERON:0005408;2.12e-11;2!UBERON:0001899;2.12e-11;2!UBERON:0000988;7.02e-08;3!UBERON:0004151;7.02e-08;3!UBERON:0007023;6.64e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002680,1.49e-35,9;UBERON:0001895,1.49e-35,9;UBERON:0010092,1.49e-35,9;UBERON:0002037,1.86e-30,6;UBERON:0006215,1.86e-30,6;UBERON:0004733,8.28e-27,12;UBERON:0002028,8.28e-27,12;UBERON:0007277,8.28e-27,12;UBERON:0004732,8.69e-25,13;UBERON:0003076,1.50e-21,15;UBERON:0003057,1.50e-21,15;UBERON:0002084,7.72e-21,1;UBERON:0002082,7.72e-21,1;UBERON:0010226,7.72e-21,1;UBERON:0002171,9.43e-21,1;UBERON:0006518,9.43e-21,1;UBERON:0008949,9.43e-21,1;UBERON:0000101,9.43e-21,1;UBERON:0002167,9.43e-21,1;UBERON:0007023,1.19e-13,114;UBERON:0007100,3.74e-12,27;UBERON:0001905,2.47e-11,2;UBERON:0002757,2.47e-11,2;UBERON:0010134,2.47e-11,2;UBERON:0005408,2.47e-11,2;UBERON:0001899,2.47e-11,2;UBERON:0000073,2.40e-09,53;UBERON:0002616,2.40e-09,53;UBERON:0001049,7.38e-09,56;UBERON:0005068,7.38e-09,56;UBERON:0006241,7.38e-09,56;UBERON:0007135,7.38e-09,56;UBERON:0000988,6.78e-08,3;UBERON:0004151,7.76e-08,3;UBERON:0000955,3.19e-07,68;UBERON:0006238,3.19e-07,68;UBERON:0010314,4.50e-07,132 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,1.52581736317083,2.21158519862449,1.47773809476774,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,2.14613024068285,1.33902874465124,2.21705459206197,0,0,0,0,0,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0,1.24271716604159,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,0,0.887432412294818,0.496771223531068,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.798169295285756,0.205116364240755,0,0.553258019713743,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.19024743058172,0,0,0,0,0,2.14280734351315,0.672567444437648,0.606965604236632,0,0,0,0,1.42736439251347,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656029291399411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0.120596438625408,1.52581736317083,2.21158519862449,1.47773809476774,0.87754158861589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0.50648636764703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0.199679000498991,2.14613024068285,1.33902874465124,2.21705459206197,0,0,0,0,0,0,0,0.795229689809303,0,0,0.137539436597234,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0,1.24271716604159,0,0,0,0,0,0.5013797880454,0,0.327872630709804,0,0,0.244052529803926,0.250381861413,0,0.887432412294818,0.496771223531068,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0.0788617450012534,0,0,0,0.128458450192919,0,0.798169295285756,0.205116364240755,0,0.553258019713743,0.484426936895553,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0,0,0.19024743058172,0,0,0,0,0,2.14280734351315,0.672567444437648,0.606965604236632,0,0,0,0,1.42736439251347,0.328863867814245,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339957450954573,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0.378893491091197,0,0.829169439458779,0.103432995861895,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p9@NDRG4 | |||
}} | }} |
Latest revision as of 06:00, 17 September 2015
Short description: | p9@NDRG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_NDRG4_5end |
Coexpression cluster: | C751_heart_pineal_left_cerebellum_pons_putamen_Mesothelial |
Association with transcript: | -200bp_to_NM_020465, uc002enk.2_5end |
EntrezGene: | NDRG4 |
HGNC: | 14466 |
UniProt: | Q9ULP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 2.23e-11 | 2 |