FFCP PHASE1:Hg19::chr16:50715172..50715194,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:50715172..50715194,- to FFCP PHASE1:Hg19::chr16:50715172..50715194,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=124460 | |EntrezGene=124460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30390 | |HGNC=30390 | ||
|TSSclassifier=strong | |||
|UniProt=Q7Z614 | |UniProt=Q7Z614 | ||
|association_with_transcript=28bp_to_ENST00000330943_5end | |||
|cluster_id=chr16:50715172..50715194,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_SNX20_5end | |||
|id=chr16:50715172..50715194,- | |||
|ontology_enrichment_celltype=CL:0000037!3.40e-88!172;CL:0000566!3.40e-88!172;CL:0002032!7.60e-84!165;CL:0000837!7.60e-84!165;CL:0000988!4.19e-80!182;CL:0000738!3.75e-78!140;CL:0002031!3.13e-65!124;CL:0002087!1.67e-62!119;CL:0000763!5.28e-59!112;CL:0000049!5.28e-59!112;CL:0000766!7.80e-49!76;CL:0000557!1.65e-43!71;CL:0000839!3.36e-42!70;CL:0002009!4.41e-40!65;CL:0002057!1.33e-38!42;CL:0002194!1.34e-38!63;CL:0000576!1.34e-38!63;CL:0000040!1.34e-38!63;CL:0000559!1.34e-38!63;CL:0000860!1.17e-34!45;CL:0000542!2.98e-20!53;CL:0000051!2.98e-20!53;CL:0000838!7.47e-20!52;CL:0000134!2.46e-17!358;CL:0002320!4.11e-16!365;CL:0000791!1.46e-12!18;CL:0000789!1.46e-12!18;CL:0002420!1.46e-12!18;CL:0002419!1.46e-12!18;CL:0000790!1.46e-12!18;CL:0000219!5.90e-12!390;CL:0000084!3.98e-11!25;CL:0000827!3.98e-11!25;CL:0002393!5.94e-09!9;CL:0002397!5.94e-09!9;CL:0000094!1.46e-08!8;CL:0000048!1.96e-08!430;CL:0000945!2.42e-08!24;CL:0000826!2.42e-08!24;CL:0000451!2.73e-08!10;CL:0000034!2.97e-08!444;CL:0000625!5.70e-08!11;CL:0000723!8.55e-08!436;CL:0000990!6.90e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.57e-36;33!CL:0002057;1.57e-36;33!CL:0000473;1.81e-33;39!CL:0000234;1.81e-33;39!CL:0000576;5.00e-29;48!CL:0000766;4.37e-26;69!CL:0002087;4.83e-21;104!CL:0000738;7.90e-19;136!CL:0000763;9.10e-19;100!CL:0000791;5.29e-16;18!CL:0000789;5.29e-16;18!CL:0002419;5.29e-16;18!CL:0000988;1.00e-15;177!CL:0000542;1.41e-12;53!CL:0000084;2.15e-12;25!CL:0000094;9.69e-11;8!CL:0000451;2.09e-10;10!CL:0000625;5.84e-10;11!CL:0000219;1.03e-08;193!CL:0000990;1.42e-08;8!CL:0000945;5.55e-08;24!CL:0002393;7.56e-08;6!CL:0002397;7.56e-08;6!CL:0000081;3.32e-07;11!CL:0000624;4.42e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.35e-101,168;CL:0000738,7.23e-96,136;CL:0002032,7.40e-96,161;CL:0000837,7.40e-96,161;CL:0000988,2.85e-94,177;CL:0002031,1.86e-77,120;CL:0002087,8.75e-77,115;CL:0000763,2.32e-69,108;CL:0000049,2.32e-69,108;CL:0000766,1.03e-63,72;CL:0000557,1.19e-56,67;CL:0002009,1.08e-53,61;CL:0000473,1.16e-53,48;CL:0000234,1.16e-53,48;CL:0000839,2.61e-53,66;CL:0002194,9.83e-52,59;CL:0000576,9.83e-52,59;CL:0000040,9.83e-52,59;CL:0000559,9.83e-52,59;CL:0000860,3.00e-50,42;CL:0002057,3.00e-50,42;CL:0000134,1.70e-26,354;CL:0002320,3.20e-25,361;CL:0000542,1.21e-21,53;CL:0000051,1.21e-21,53;CL:0000838,3.95e-21,52;CL:0000219,8.97e-21,386;CL:0000791,5.39e-16,18;CL:0000789,5.39e-16,18;CL:0002420,5.39e-16,18;CL:0002419,5.39e-16,18;CL:0000790,5.39e-16,18;CL:0000048,1.84e-15,427;CL:0000034,2.24e-15,441;CL:0000723,9.61e-15,433;CL:0000084,2.02e-12,25;CL:0000827,2.02e-12,25;CL:0002393,2.93e-11,9;CL:0002397,2.93e-11,9;CL:0000094,9.52e-11,8;CL:0000451,2.16e-10,10;CL:0000625,5.67e-10,11;CL:0000990,1.48e-08,8;CL:0000945,5.14e-08,24;CL:0000826,5.14e-08,24;CL:0000081,3.28e-07,11;CL:0000624,4.39e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;4.54e-36;42!CL:0000049;2.21e-18;108!CL:0000790;5.29e-16;18!CL:0000051;1.41e-12;53 | |||
|ontology_enrichment_disease=DOID:2531!1.34e-08!51;DOID:0060083!1.34e-08!51;DOID:8692!4.29e-08!31;DOID:1240!7.95e-08!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.68e-49!102;UBERON:0003061!9.68e-49!102;UBERON:0002193!7.21e-44!112;UBERON:0002371!7.84e-37!80;UBERON:0001474!2.42e-32!86;UBERON:0002405!1.61e-27!115;UBERON:0004765!1.27e-23!101;UBERON:0001434!1.27e-23!101;UBERON:0002384!1.80e-14!375;UBERON:0003081!2.16e-11!216;UBERON:0007023!5.33e-09!115;UBERON:0000178!4.12e-08!15;UBERON:0000179!4.12e-08!15;UBERON:0000463!4.12e-08!15;UBERON:0002204!3.71e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.12e-10;15!UBERON:0000179;1.12e-10;15!UBERON:0000463;1.12e-10;15!UBERON:0002390;4.12e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.60e-65,98;UBERON:0003061,3.60e-65,98;UBERON:0002193,9.25e-60,108;UBERON:0002405,3.88e-49,93;UBERON:0002371,6.16e-49,76;UBERON:0001474,1.05e-43,82;UBERON:0004765,7.68e-38,90;UBERON:0001434,7.20e-32,100;UBERON:0002384,1.72e-23,371;UBERON:0003081,2.21e-19,203;UBERON:0002204,3.24e-11,167;UBERON:0000178,1.12e-10,15;UBERON:0000179,1.12e-10,15;UBERON:0000463,1.12e-10,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.43197753338117,3.44822475689772,3.62069594042925,31.4691421479123,8.82807615623589,13.0045543585504,0,0,0,1.31694240986513,0.995184627411951,4.40400659002271,11.6339035791694,15.8430113501412,15.1907609501096,0.895661896959697,0.32389366601898,1.28787783817093,32.5692054866225,30.6079514387936,49.9723166046901,37.4210749418152,16.8578834088949,28.4929861223495,214.04313988768,237.204814245947,188.94930168098,21.0294865249337,21.9464792418501,27.0852973188684,52.3313703928441,28.9280519061317,31.0118408534217,33.6692281607993,22.4650318953266,40.9175760511386,322.264720282422,315.551506357422,326.061934157511,25.5384129993154,13.6172453925874,21.1759564658495,193.210223582436,193.991645652315,185.91365106758,19.9781835869012,16.2042159834528,19.304205633894,28.3082083658002,31.4654363948264,28.7232344346475,23.813669803057,17.2703426767732,15.5903819096168,33.0614782739848,26.0580847130808,25.7556456808134,3.51992488922645,3.27683166757279,5.33705552318133,1.70692089026603,2.80277190925209,4.59801951963587,3.30522436392431,0,1.70763890732835,2.93618594685469,4.20500550937752,10.5737062863221,8.40762844472304,2.89722493252585,7.27826149421182,7.46720449223413,11.308082444973,16.7186495390678,14.9924242651452,14.203434172042,5.84480185223734,16.1545162483502,35.9419207119301,32.3439486092087,25.4555631939115,17.8046934418688,12.6157567133082,22.5279929307036,16.5810010671509,24.9230653732145,11.2697788003166,6.68852070224283,11.4989076185474,16.4298546911471,14.562378756873,17.5249997196141,14.1691027530922,10.8312240870193,5.20866763085135,11.4054245333805,6.02300476311091,6.78329039118417,8.74515085866421,12.0756398542449,11.4957919568947,4.63695509416885,5.88368430723716,3.62061009706997,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.72038491523742,0,0,6.16640047943898,6.79105975467142,8.7752253942451,10.7320780937404,17.731842234184,9.65789503456869,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,51.3943628000647,46.533631697799,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.44703808522356,1.63802985597466,8.9178697373237,0,0,0,0,0,0,8.86793828212698,39.7098437399649,1.86595303986695,0.432359860250884,2.90357596880674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.51579964002488,2.10833939483032,0,0,0,0,0,0,3.02629888782524,5.91092280605782,11.6438890424139,8.72732646702289,0.254094624222463,0,0,0,0,85.3868007299788,50.8574480646842,43.5136289107837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.51132920165282,14.2371372540287,20.7051462138682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.877039506583738,1.3071772551245,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6196469961995,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.564862804660675,0,0,0,0,36.028780255484,32.1147626999798,28.4823593587081,21.6790915666588,18.5113022888787,29.1812990036723,30.2417604853344,27.7593811702995,0,0,0,1.30062222588003,0,0,0,15.3676116003269,8.42623628582414,6.1385338989926,2.27235358192189,5.33514638415572,13.4658460629583,0.626719583092093,7.51903431270201,14.3898011131363,6.26293492904428,9.88818565236133,3.40676990152261,0.343505344755765,1.22896305723383,1.56573275524691,0.333698283423817,4.68931428964897,0,0,0.540911356951966,0,1.4098700508785,0,0,0,2.34031106982705,0,0,0.296964680832639,0,0,0.422008249231538,0,0.329607748453519,0,0.398495976502139,4.42054264849836,0,0,1.47701766553283,0,0,0,6.13886844272246,0.295930216910801,11.974154617347,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0,0,0.219385397153973,0,0,0.384751292518985,0,0,0,0,0.957003479195758,0.0915975934018623,0,0,9.10485487091144,1.49590513710141,0,0,0,0,0.635746315921515,0,0,0,0,0.995261931078505,0.0884575645033392,0.611030144933625,0,0,0,0.202203398942031,0,0.234264445725339,0.364909578431332,0,0,0,6.04953580243319,0.30607276163049,4.23350083510869,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.290967049465258,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,5.10986352267889,0,1.8402114799552,0.558564802544508,0,0,0,0,0.223171457441873,0.268733889946905,0,0,0,0,0,0,0.423366660328922,0,0.272406812223151,0,0,0,15.0732507339505,10.0594254092533,0.0607495566580247,0,0.472834243795189,0.104909176269996,0,0,0,2.85878130549347,0,0,0,0,0,0,0.82092520749339,0,0,0.293104467356165,0,0.517131825446202,0.66116300871345,0,0,1.17466153824464,0.314408610199332,1.24271716604159,7.93865634899121,0.790446527591777,1.09613338542806,0,0,0,0.306345576763462,0,0,0,0,0.250381861413,0,0.665574309221114,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1382584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| ||
|short_description=p2@SNX20 | |||
}} | }} |
Latest revision as of 21:00, 16 September 2015
Short description: | p2@SNX20 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SNX20_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 28bp_to_ENST00000330943_5end |
EntrezGene: | SNX20 |
HGNC: | 30390 |
UniProt: | Q7Z614 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.60e-65 | 98 |
blood island | 3.60e-65 | 98 |
hemolymphoid system | 9.25e-60 | 108 |
immune system | 3.88e-49 | 93 |
bone marrow | 6.16e-49 | 76 |
bone element | 1.05e-43 | 82 |
skeletal element | 7.68e-38 | 90 |
skeletal system | 7.20e-32 | 100 |
connective tissue | 1.72e-23 | 371 |
lateral plate mesoderm | 2.21e-19 | 203 |
musculoskeletal system | 3.24e-11 | 167 |
blood | 1.12e-10 | 15 |
haemolymphatic fluid | 1.12e-10 | 15 |
organism substance | 1.12e-10 | 15 |