FFCP PHASE1:Hg19::chr16:30080645..30080685,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:30080645..30080685,+ to FFCP PHASE1:Hg19::chr16:30080645..30080685,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr16:30080645..30080685,+ | |||
|coexpression_cluster_id=C1219 | |||
|description=CAGE_peak_at_chr16:30080645..30080685,+ | |||
|id=chr16:30080645..30080685,+ | |||
|ontology_enrichment_celltype=CL:0000192!1.17e-09!42;CL:0000514!1.17e-09!42;CL:0000222!1.59e-09!119;CL:0000359!2.31e-09!32;CL:0000680!1.95e-08!57;CL:0000056!1.95e-08!57;CL:0000355!1.95e-08!57;CL:0000183!4.90e-08!59;CL:0000187!6.09e-08!54;CL:0000393!1.07e-07!60;CL:0000211!1.07e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000359;7.12e-11;32!CL:0000192;7.53e-08;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,2.64e-11,32;CL:0000192,2.29e-10,43;CL:0000514,2.29e-10,43;CL:0000222,7.02e-10,121;CL:0000680,2.08e-08,58;CL:0000056,2.08e-08,58;CL:0000355,2.08e-08,58;CL:0000187,8.01e-08,55;CL:0000393,1.18e-07,61;CL:0000211,1.18e-07,61;CL:0002321,2.87e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000514;7.53e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004290!9.18e-12!70;UBERON:0000486!5.47e-11!82;UBERON:0001134!2.65e-10!61;UBERON:0002036!2.65e-10!61;UBERON:0003082!2.65e-10!61;UBERON:0002385!3.82e-10!63;UBERON:0001015!3.82e-10!63;UBERON:0000383!3.82e-10!63;UBERON:0001637!9.31e-10!42;UBERON:0003509!9.31e-10!42;UBERON:0004572!9.31e-10!42;UBERON:0000914!1.05e-09!83;UBERON:0002329!1.05e-09!83;UBERON:0003077!1.05e-09!83;UBERON:0003059!1.05e-09!83;UBERON:0007282!1.05e-09!83;UBERON:0009618!1.05e-09!83;UBERON:0007285!1.05e-09!83;UBERON:0004872!6.50e-09!84;UBERON:0000055!4.65e-08!69;UBERON:0001981!9.74e-08!60;UBERON:0007500!9.74e-08!60;UBERON:0004537!9.74e-08!60;UBERON:0006965!9.74e-08!60;UBERON:0002204!3.92e-07!167;UBERON:0004573!4.07e-07!33;UBERON:0004571!4.07e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.48e-08;42!UBERON:0003509;2.48e-08;42!UBERON:0004572;2.48e-08;42!UBERON:0004573;7.32e-08;33!UBERON:0004571;7.32e-08;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007503,8.41e-13,78;UBERON:0001637,1.53e-12,42;UBERON:0003509,1.53e-12,42;UBERON:0004572,1.53e-12,42;UBERON:0007524,3.06e-12,73;UBERON:0003077,4.57e-12,72;UBERON:0007285,4.57e-12,72;UBERON:0002329,1.05e-11,71;UBERON:0003059,1.05e-11,71;UBERON:0007282,1.05e-11,71;UBERON:0004290,1.05e-11,71;UBERON:0009618,1.05e-11,71;UBERON:0000486,1.26e-11,83;UBERON:0001134,1.54e-10,62;UBERON:0002036,1.54e-10,62;UBERON:0003082,1.54e-10,62;UBERON:0002385,1.90e-10,64;UBERON:0001015,1.90e-10,64;UBERON:0000383,1.90e-10,64;UBERON:0004872,1.19e-09,83;UBERON:0007500,1.36e-09,59;UBERON:0001981,1.36e-09,59;UBERON:0004537,1.36e-09,59;UBERON:0006965,1.36e-09,59;UBERON:0004573,3.12e-09,33;UBERON:0004571,3.12e-09,33;UBERON:0000055,6.85e-09,68;UBERON:0005256,1.65e-08,122;UBERON:0000926,1.86e-07,315;UBERON:0004120,1.86e-07,315;UBERON:0006603,1.86e-07,315;UBERON:0003914,6.10e-07,117;UBERON:0002100,7.29e-07,199 | |||
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| ||
|short_description=p@chr16:30080645..30080685,+ | |||
}} | }} |
Latest revision as of 08:04, 25 July 2015
Short description: | p@chr16:30080645..30080685, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:30080645..30080685, + |
Coexpression cluster: | C1219_Smooth_Tracheal_penis_tongue_skeletal_leiomyoma_diaphragm |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 2.64e-11 | 32 |
smooth muscle cell | 2.29e-10 | 43 |
smooth muscle myoblast | 2.29e-10 | 43 |
mesodermal cell | 7.02e-10 | 121 |
muscle precursor cell | 2.08e-08 | 58 |
myoblast | 2.08e-08 | 58 |
multi-potent skeletal muscle stem cell | 2.08e-08 | 58 |
muscle cell | 8.01e-08 | 55 |
electrically responsive cell | 1.18e-07 | 61 |
electrically active cell | 1.18e-07 | 61 |
embryonic cell | 2.87e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
epithelial vesicle | 8.41e-13 | 78 |
artery | 1.53e-12 | 42 |
arterial blood vessel | 1.53e-12 | 42 |
arterial system | 1.53e-12 | 42 |
dense mesenchyme tissue | 3.06e-12 | 73 |
paraxial mesoderm | 4.57e-12 | 72 |
presumptive paraxial mesoderm | 4.57e-12 | 72 |
somite | 1.05e-11 | 71 |
presomitic mesoderm | 1.05e-11 | 71 |
presumptive segmental plate | 1.05e-11 | 71 |
dermomyotome | 1.05e-11 | 71 |
trunk paraxial mesoderm | 1.05e-11 | 71 |
multilaminar epithelium | 1.26e-11 | 83 |
skeletal muscle tissue | 1.54e-10 | 62 |
striated muscle tissue | 1.54e-10 | 62 |
myotome | 1.54e-10 | 62 |
muscle tissue | 1.90e-10 | 64 |
musculature | 1.90e-10 | 64 |
musculature of body | 1.90e-10 | 64 |
splanchnic layer of lateral plate mesoderm | 1.19e-09 | 83 |
epithelial tube open at both ends | 1.36e-09 | 59 |
blood vessel | 1.36e-09 | 59 |
blood vasculature | 1.36e-09 | 59 |
vascular cord | 1.36e-09 | 59 |
systemic artery | 3.12e-09 | 33 |
systemic arterial system | 3.12e-09 | 33 |
vessel | 6.85e-09 | 68 |
trunk mesenchyme | 1.65e-08 | 122 |
mesoderm | 1.86e-07 | 315 |
mesoderm-derived structure | 1.86e-07 | 315 |
presumptive mesoderm | 1.86e-07 | 315 |
epithelial tube | 6.10e-07 | 117 |
trunk | 7.29e-07 | 199 |