FFCP PHASE1:Hg19::chr16:29674559..29674575,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:29674559..29674575,+ to FFCP PHASE1:Hg19::chr16:29674559..29674575,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6693 | |EntrezGene=6693 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11249 | |HGNC=11249 | ||
|TSSclassifier=strong | |||
|UniProt=P16150,A8K9B1 | |UniProt=P16150,A8K9B1 | ||
|association_with_transcript=-4bp_to_ENST00000360121,NM_003123,uc002dtn.2,uc010bzd.2_5end | |||
|cluster_id=chr16:29674559..29674575,+ | |||
|description=CAGE_peak_1_at_SPN_5end | |||
|id=chr16:29674559..29674575,+ | |||
|ontology_enrichment_celltype=CL:0000037!6.80e-82!172;CL:0000566!6.80e-82!172;CL:0002032!8.35e-77!165;CL:0000837!8.35e-77!165;CL:0000988!7.89e-76!182;CL:0000738!3.44e-57!140;CL:0002031!2.97e-50!124;CL:0000763!8.56e-50!112;CL:0000049!8.56e-50!112;CL:0002087!7.75e-47!119;CL:0000766!2.57e-27!76;CL:0000557!2.31e-26!71;CL:0000839!1.39e-25!70;CL:0002009!8.13e-23!65;CL:0000542!2.22e-22!53;CL:0000051!2.22e-22!53;CL:0000838!6.06e-22!52;CL:0002194!1.15e-21!63;CL:0000576!1.15e-21!63;CL:0000040!1.15e-21!63;CL:0000559!1.15e-21!63;CL:0002057!4.51e-17!42;CL:0000860!3.89e-15!45;CL:0000084!3.43e-14!25;CL:0000827!3.43e-14!25;CL:0000791!1.53e-10!18;CL:0000789!1.53e-10!18;CL:0002420!1.53e-10!18;CL:0002419!1.53e-10!18;CL:0000790!1.53e-10!18;CL:0000134!2.06e-09!358;CL:0002320!1.95e-08!365;CL:0000945!1.25e-07!24;CL:0000826!1.25e-07!24;CL:0000625!2.09e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000763;3.04e-16;100!CL:0000084;1.23e-15;25!CL:0000988;2.30e-14;177!CL:0002087;3.88e-14;104!CL:0000576;6.84e-14;48!CL:0000738;1.02e-13;136!CL:0000766;1.28e-13;69!CL:0000473;3.72e-13;39!CL:0000234;3.72e-13;39!CL:0000542;1.02e-12;53!CL:0000860;2.65e-12;33!CL:0002057;2.65e-12;33!CL:0000791;1.43e-11;18!CL:0000789;1.43e-11;18!CL:0002419;1.43e-11;18!CL:0000625;4.44e-08;11!CL:0000945;2.27e-07;24!CL:0000451;4.73e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.02e-92,168;CL:0002032,5.00e-87,161;CL:0000837,5.00e-87,161;CL:0000988,5.50e-86,177;CL:0000738,5.14e-65,136;CL:0000763,2.28e-58,108;CL:0000049,2.28e-58,108;CL:0002031,2.62e-57,120;CL:0002087,1.83e-53,115;CL:0000766,7.18e-33,72;CL:0000557,6.96e-32,67;CL:0000839,5.55e-31,66;CL:0002009,8.17e-28,61;CL:0002194,1.73e-26,59;CL:0000576,1.73e-26,59;CL:0000040,1.73e-26,59;CL:0000559,1.73e-26,59;CL:0000542,1.55e-23,53;CL:0000051,1.55e-23,53;CL:0000838,4.74e-23,52;CL:0000473,3.95e-22,48;CL:0000234,3.95e-22,48;CL:0000860,7.71e-19,42;CL:0002057,7.71e-19,42;CL:0000084,1.25e-15,25;CL:0000827,1.25e-15,25;CL:0000134,2.56e-14,354;CL:0002320,4.92e-13,361;CL:0000791,1.45e-11,18;CL:0000789,1.45e-11,18;CL:0002420,1.45e-11,18;CL:0002419,1.45e-11,18;CL:0000790,1.45e-11,18;CL:0000219,1.04e-09,386;CL:0000625,4.49e-08,11;CL:0000945,2.27e-07,24;CL:0000826,2.27e-07,24;CL:0000451,4.27e-07,10;CL:0002393,4.30e-07,9;CL:0002397,4.30e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;5.24e-16;108!CL:0002057;1.03e-13;42!CL:0000051;1.02e-12;53!CL:0000790;1.43e-11;18 | |||
|ontology_enrichment_disease=DOID:2531!1.68e-27!51;DOID:0060083!1.68e-27!51;DOID:1240!5.79e-26!39;DOID:8692!1.13e-21!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.25e-23;31!DOID:1240;2.89e-22;39!DOID:2531;3.69e-17;51!DOID:0060083;3.69e-17;51!DOID:1036;7.73e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,9.40e-29,39;DOID:2531,2.15e-28,51;DOID:0060083,2.15e-28,51;DOID:8692,5.69e-24,31;DOID:1036,7.78e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0002390!2.15e-31!102;UBERON:0003061!2.15e-31!102;UBERON:0002193!8.46e-27!112;UBERON:0002371!4.00e-22!80;UBERON:0001474!6.66e-19!86;UBERON:0007023!2.77e-18!115;UBERON:0002405!3.38e-17!115;UBERON:0004765!3.46e-13!101;UBERON:0001434!3.46e-13!101;UBERON:0002384!6.58e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.15e-07;15!UBERON:0000179;5.15e-07;15!UBERON:0000463;5.15e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.26e-38,98;UBERON:0003061,5.26e-38,98;UBERON:0002193,3.55e-33,108;UBERON:0002371,2.47e-27,76;UBERON:0002405,5.60e-27,93;UBERON:0001474,2.82e-23,82;UBERON:0004765,7.96e-19,90;UBERON:0007023,6.46e-16,114;UBERON:0001434,2.02e-15,100;UBERON:0002384,2.38e-12,371;UBERON:0003081,1.46e-07,203;UBERON:0000178,5.12e-07,15;UBERON:0000179,5.12e-07,15;UBERON:0000463,5.12e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0,0,0,129.673549554273,121.837274743719,119.955230722047,101.487983427017,92.119055543331,115.647644117109,0,0,0,0.387336002901508,5.11809236954717,174.105060525564,58.723513304379,54.9491786068188,70.9625547240835,8.2848725468772,20.0814072931767,11.07574940827,37.8035420826868,36.6539665378145,44.878051319746,27.6590553917765,24.2589053932877,17.962969511916,45.1677055945776,36.1186596206032,26.0130452877444,25.5111803745098,18.719055823931,31.1480919166986,28.9893202895611,25.9260842554953,18.8767726933871,34.2813959455411,27.9208253556201,31.327519164153,64.3210035364096,49.2675234325431,41.770025552204,22.346111374401,16.4541715160431,19.3074897188628,37.9385484537682,34.4178726157333,24.7595282963833,15.7403870684676,19.1504370713534,12.9749578850763,125.06312949667,142.019672376649,89.3145829865681,59.9834890322284,39.4965228173162,43.7173595816058,208.914341162335,209.260344413443,183.394810379692,8.79981222306614,7.64594055766984,4.44754626931777,11.0949857867292,5.60554381850417,6.8970292794538,9.91567309177293,6.67837628174755,1.1384259382189,2.34894875748376,3.82273228125229,145.388461436928,83.5157758842489,198.328215835633,73.9628735628012,51.4844099201406,77.511765122815,130.071093413948,38.7847497293973,51.6058108250859,31.1722765452658,147.173213545314,64.2240878295145,78.6445325771855,74.7418663991443,181.24921741183,157.892047937692,165.095656222091,145.636459373142,108.96596023638,55.7557477489347,62.8720946010826,70.0388009493344,202.823723428643,91.9729184644611,75.9416654516612,89.8219906669235,90.7911430823676,95.0581842630371,96.9461085337342,88.9898953749637,125.938825375948,87.4515085866421,114.836967241348,114.136791572025,139.71347305474,108.31327929232,110.356195758693,0,0,0,0,0,0,0,0,0.283604451492204,0,1.14185221401064,15.1935727577347,0,0,578.992550279955,595.871961038092,647.372309766354,91.1034184846406,90.9471908140403,61.6619452207078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.27121669744253,31.022421131866,0,0,0,0,0.286836620748814,3.54668382198357,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09776335516636,0.397589304964456,0.580969714347592,1.24393266018445,0.756962552626885,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0,0,0,0,0,0,0,0,0.8231480226628,0,0,0,1.18157981336281,158.043789590445,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.4208795296036,230.026192631871,135.55162000732,0,0,0,0,0,0,312.348492826028,203.303834136539,101.383448499438,111.692963898145,94.0506129026531,0,0,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,90.0015976744809,29.1309113030633,96.9836121621945,0,0,0,0,0.205476322550383,0,179.896656109611,198.804037043745,126.789014017396,147.466148685431,0,0,0,0.837581326671744,0,3.74503511973591,2.99161459204025,11.189218862773,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,119.098383046783,78.3042548971579,139.706373164709,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.231046011313244,0,1.46139224653261,0.105551628892876,0,0,0.647747748306418,0,0.812839312631559,0,0,0,0.671624264166535,78.7142957158905,65.62029820725,0,0,0,9.58281408323817,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.275673144969061,0,0,3.74997160630844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.589409885985,0,0.286822704408103,0,0,0,2.74439925886963,0,0,0,0,2.68120910214315,0,7.62564786291911,0,0,0,0,89.818226834094,69.5819858499562,106.524024001568,84.5722802875151,74.045209155515,77.8167973431261,77.7645269622885,95.9681463316067,0.106824071127473,2.88743956579008,0,64.6595049437501,66.6523763951175,100.807992024703,106.656176455582,119.148884745392,151.097737034437,113.880387505449,66.8721196965584,314.773636665187,205.18297645084,218.568454603367,170.431444421246,65.0080426758157,188.690988246847,164.870360775086,176.300342403795,116.104806527448,175.127235655821,180.953971284964,171.35406853813,158.264357275653,261.423397287633,352.029960990457,133.875560845612,326.743600605861,1132.12565085543,0,13.6252606722861,0.242721043499027,263.340717047681,0,0,3.26661148915902,0,0.994147647766298,4.50142132513641,0.111308705022906,21.7541113979323,0,4.98119970627674,33.7066376948,0,0.306806047506464,42.3411730786079,0,0,0,240.950586376857,2.17015492401254,143.689855408164,0,1.93866549219044,1.94813006139888,0,0,0,2.17499872630438,0,0,0,0,0.291604613383254,0,2.65722415744152,2.41192877250816,1.52581736317083,0.552896299656123,1.77328571372128,0.87754158861589,0.10893846351899,0,2.6163087891291,0,0.922255617552241,0.628303510868405,0,1.5950057986596,0.824378340616761,2.66517388009317,102.193298195736,207.370918697828,462.899534091936,94.2989861379815,92.5415161979731,97.3365204459888,91.0817917076088,405.129339820985,0,0,0.141353071433941,0.432777279484182,10.9478812418636,6.89969003126046,4.2772110145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| ||
|short_description=p1@SPN | |||
}} | }} |
Latest revision as of 03:00, 16 September 2015
Short description: | p1@SPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SPN_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000360121, NM_003123, uc002dtn.2, uc010bzd.2_5end |
EntrezGene: | SPN |
HGNC: | 11249 |
UniProt: | P16150A8K9B1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.26e-38 | 98 |
blood island | 5.26e-38 | 98 |
hemolymphoid system | 3.55e-33 | 108 |
bone marrow | 2.47e-27 | 76 |
immune system | 5.60e-27 | 93 |
bone element | 2.82e-23 | 82 |
skeletal element | 7.96e-19 | 90 |
adult organism | 6.46e-16 | 114 |
skeletal system | 2.02e-15 | 100 |
connective tissue | 2.38e-12 | 371 |
lateral plate mesoderm | 1.46e-07 | 203 |
blood | 5.12e-07 | 15 |
haemolymphatic fluid | 5.12e-07 | 15 |
organism substance | 5.12e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 9.40e-29 | 39 |
hematologic cancer | 2.15e-28 | 51 |
immune system cancer | 2.15e-28 | 51 |
myeloid leukemia | 5.69e-24 | 31 |
chronic leukemia | 7.78e-07 | 8 |