FFCP PHASE1:Hg19::chr15:75871589..75871676,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:75871589..75871676,- to FFCP PHASE1:Hg19::chr15:75871589..75871676,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5780 | |EntrezGene=5780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9661 | |HGNC=9661 | ||
|TSSclassifier=strong | |||
|UniProt=P43378,F5H2Q4 | |UniProt=P43378,F5H2Q4 | ||
|association_with_transcript=0bp_to_ENST00000306726,ENST00000544966,NM_002833,uc002bal.2_5end | |||
|cluster_id=chr15:75871589..75871676,- | |||
|description=CAGE_peak_1_at_PTPN9_5end | |||
|id=chr15:75871589..75871676,- | |||
|ontology_enrichment_celltype=CL:0000055!1.70e-35!180;CL:0000393!2.11e-13!60;CL:0000211!2.11e-13!60;CL:0000133!2.56e-13!59;CL:0002321!3.14e-13!248;CL:0000183!4.11e-13!59;CL:0000220!1.26e-12!246;CL:0000187!3.71e-11!54;CL:0000680!6.17e-11!57;CL:0000056!6.17e-11!57;CL:0000355!6.17e-11!57;CL:0000333!2.20e-10!41;CL:0000221!4.46e-10!71;CL:0000222!4.71e-10!119;CL:0000192!6.75e-10!42;CL:0000514!6.75e-10!42;CL:0000057!2.62e-09!75;CL:0002319!1.12e-08!25;CL:0000359!5.82e-08!32;CL:0000327!4.38e-07!14;CL:0000243!9.08e-07!15;CL:0000125!9.08e-07!15;CL:0000030!9.08e-07!15;CL:0000339!9.08e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.95e-09;25!CL:0000359;1.86e-07;32!CL:0000192;2.76e-07;43!CL:0000393;2.85e-07;61!CL:0000211;2.85e-07;61!CL:0000327;5.00e-07;15!CL:0000243;8.06e-07;15!CL:0000125;8.06e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000393,1.85e-13,61;CL:0000211,1.85e-13,61;CL:0002321,2.61e-13,250;CL:0000133,2.72e-13,59;CL:0000187,3.22e-11,55;CL:0000680,5.30e-11,58;CL:0000056,5.30e-11,58;CL:0000355,5.30e-11,58;CL:0000333,2.19e-10,41;CL:0000222,4.09e-10,121;CL:0000221,5.17e-10,72;CL:0000192,6.01e-10,43;CL:0000514,6.01e-10,43;CL:0000057,2.02e-09,76;CL:0002319,1.12e-08,25;CL:0000359,5.81e-08,32;CL:0000327,4.28e-07,15;CL:0000243,9.07e-07,15;CL:0000125,9.07e-07,15;CL:0000030,9.07e-07,15;CL:0000339,9.07e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000133;1.04e-07;59!CL:0000514;2.76e-07;43!CL:0000339;8.06e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.10e-20!365;UBERON:0000119!4.47e-18!312;UBERON:0000073!1.94e-17!94;UBERON:0001016!1.94e-17!94;UBERON:0000483!8.32e-17!309;UBERON:0000924!7.78e-16!173;UBERON:0006601!7.78e-16!173;UBERON:0005743!9.52e-16!86;UBERON:0004121!3.76e-15!169;UBERON:0001017!5.52e-15!82;UBERON:0000481!8.92e-14!347;UBERON:0000914!5.02e-13!83;UBERON:0002329!5.02e-13!83;UBERON:0003077!5.02e-13!83;UBERON:0003059!5.02e-13!83;UBERON:0007282!5.02e-13!83;UBERON:0009618!5.02e-13!83;UBERON:0007285!5.02e-13!83;UBERON:0002346!1.88e-12!90;UBERON:0000468!3.98e-12!659;UBERON:0005256!4.85e-12!143;UBERON:0004290!8.09e-12!70;UBERON:0003075!8.39e-12!86;UBERON:0007284!8.39e-12!86;UBERON:0000486!3.24e-11!82;UBERON:0000033!4.94e-11!123;UBERON:0000922!1.95e-10!612;UBERON:0000955!3.18e-10!69;UBERON:0006238!3.18e-10!69;UBERON:0001134!5.62e-10!61;UBERON:0002036!5.62e-10!61;UBERON:0003082!5.62e-10!61;UBERON:0000025!1.11e-09!194;UBERON:0000153!1.18e-09!129;UBERON:0007811!1.18e-09!129;UBERON:0002385!1.64e-09!63;UBERON:0001015!1.64e-09!63;UBERON:0000383!1.64e-09!63;UBERON:0002050!6.76e-09!605;UBERON:0005423!6.76e-09!605;UBERON:0003056!1.09e-08!61;UBERON:0000467!1.12e-08!625;UBERON:0000923!1.38e-08!604;UBERON:0005291!1.38e-08!604;UBERON:0006598!1.38e-08!604;UBERON:0002532!1.38e-08!604;UBERON:0002616!1.40e-08!59;UBERON:0000477!1.54e-08!286;UBERON:0002100!1.67e-08!216;UBERON:0000480!2.12e-08!626;UBERON:0001049!5.28e-08!57;UBERON:0005068!5.28e-08!57;UBERON:0006241!5.28e-08!57;UBERON:0007135!5.28e-08!57;UBERON:0004111!2.26e-07!241;UBERON:0000956!9.07e-07!25;UBERON:0000203!9.07e-07!25 | |||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p1@PTPN9 | |||
}} | }} |
Latest revision as of 03:56, 19 September 2015
Short description: | p1@PTPN9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PTPN9_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000306726, ENST00000544966, NM_002833, uc002bal.2_5end |
EntrezGene: | PTPN9 |
HGNC: | 9661 |
UniProt: | P43378F5H2Q4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 1.85e-13 | 61 |
electrically active cell | 1.85e-13 | 61 |
embryonic cell | 2.61e-13 | 250 |
neurectodermal cell | 2.72e-13 | 59 |
muscle cell | 3.22e-11 | 55 |
muscle precursor cell | 5.30e-11 | 58 |
myoblast | 5.30e-11 | 58 |
multi-potent skeletal muscle stem cell | 5.30e-11 | 58 |
migratory neural crest cell | 2.19e-10 | 41 |
mesodermal cell | 4.09e-10 | 121 |
ectodermal cell | 5.17e-10 | 72 |
smooth muscle cell | 6.01e-10 | 43 |
smooth muscle myoblast | 6.01e-10 | 43 |
fibroblast | 2.02e-09 | 76 |
neural cell | 1.12e-08 | 25 |
vascular associated smooth muscle cell | 5.81e-08 | 32 |
extracellular matrix secreting cell | 4.28e-07 | 15 |
glial cell (sensu Vertebrata) | 9.07e-07 | 15 |
glial cell | 9.07e-07 | 15 |
glioblast | 9.07e-07 | 15 |
glioblast (sensu Vertebrata) | 9.07e-07 | 15 |