FFCP PHASE1:Hg19::chr15:73344659..73344713,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:73344659..73344713,+ to FFCP PHASE1:Hg19::chr15:73344659..73344713,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4756 | |EntrezGene=4756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7754 | |HGNC=7754 | ||
|TSSclassifier=strong | |||
|UniProt=Q92859,E7EUX3,B7ZKM9,Q59FP8,B7ZKN0 | |UniProt=Q92859,E7EUX3,B7ZKM9,Q59FP8,B7ZKN0 | ||
|association_with_transcript=-111bp_to_ENST00000261908,ENST00000379842,NM_001172623,NM_001172624,NM_002499_5end | |||
|cluster_id=chr15:73344659..73344713,+ | |||
|description=CAGE_peak_2_at_NEO1_5end | |||
|id=chr15:73344659..73344713,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!5.63e-07!22;DOID:2994!5.63e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:3095;6.40e-07;22!DOID:2994;6.40e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.83e-07,22;DOID:2994,4.83e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!6.70e-26!94;UBERON:0001016!6.70e-26!94;UBERON:0005743!9.33e-26!86;UBERON:0001017!3.23e-25!82;UBERON:0001049!3.78e-23!57;UBERON:0005068!3.78e-23!57;UBERON:0006241!3.78e-23!57;UBERON:0007135!3.78e-23!57;UBERON:0002616!3.86e-22!59;UBERON:0002346!8.51e-22!90;UBERON:0000924!8.22e-21!173;UBERON:0006601!8.22e-21!173;UBERON:0000955!1.23e-20!69;UBERON:0006238!1.23e-20!69;UBERON:0003075!4.33e-20!86;UBERON:0007284!4.33e-20!86;UBERON:0004121!2.64e-19!169;UBERON:0002780!2.91e-19!41;UBERON:0001890!2.91e-19!41;UBERON:0006240!2.91e-19!41;UBERON:0003080!5.61e-19!42;UBERON:0000033!7.00e-18!123;UBERON:0000153!1.84e-17!129;UBERON:0007811!1.84e-17!129;UBERON:0003056!1.80e-16!61;UBERON:0001893!3.73e-16!34;UBERON:0007023!8.77e-16!115;UBERON:0002020!1.40e-15!34;UBERON:0003528!1.40e-15!34;UBERON:0002791!1.55e-15!33;UBERON:0001869!2.54e-15!32;UBERON:0000475!1.37e-14!365;UBERON:0002619!3.23e-13!22;UBERON:0000956!5.68e-13!25;UBERON:0000203!5.68e-13!25;UBERON:0001950!2.42e-12!20;UBERON:0000481!1.27e-09!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.89e-14;41!UBERON:0001890;2.89e-14;41!UBERON:0001893;3.15e-14;34!UBERON:0001869;5.07e-14;32!UBERON:0000073;7.22e-14;53!UBERON:0002616;7.22e-14;53!UBERON:0002791;1.01e-13;32!UBERON:0003528;1.05e-13;34!UBERON:0002020;1.05e-13;34!UBERON:0002619;2.99e-13;22!UBERON:0000956;4.43e-13;25!UBERON:0000203;4.43e-13;25!UBERON:0001950;2.27e-12;20!UBERON:0001017;1.10e-09;75!UBERON:0000955;1.45e-09;68!UBERON:0001016;1.54e-09;83!UBERON:0000922;1.11e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.88e-25,81;UBERON:0001016,3.20e-25,89;UBERON:0001049,1.15e-23,56;UBERON:0005068,1.15e-23,56;UBERON:0006241,1.15e-23,56;UBERON:0007135,1.15e-23,56;UBERON:0000073,4.11e-23,53;UBERON:0002616,4.11e-23,53;UBERON:0002346,1.40e-21,86;UBERON:0000955,1.23e-20,68;UBERON:0006238,1.23e-20,68;UBERON:0004121,3.16e-20,171;UBERON:0000924,3.16e-20,171;UBERON:0006601,3.16e-20,171;UBERON:0003075,7.48e-20,82;UBERON:0007284,7.48e-20,82;UBERON:0002780,1.77e-19,41;UBERON:0001890,1.77e-19,41;UBERON:0003080,1.77e-19,41;UBERON:0006240,1.77e-19,41;UBERON:0003056,4.15e-17,61;UBERON:0011216,1.32e-16,223;UBERON:0001893,2.47e-16,34;UBERON:0010314,3.89e-16,132;UBERON:0003528,9.45e-16,34;UBERON:0002020,9.45e-16,34;UBERON:0001869,1.73e-15,32;UBERON:0002791,3.98e-15,32;UBERON:0007023,5.38e-15,114;UBERON:0010371,6.14e-15,104;UBERON:0002619,2.33e-13,22;UBERON:0000956,4.12e-13,25;UBERON:0000203,4.12e-13,25;UBERON:0001950,1.79e-12,20 | |||
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| ||
|short_description=p2@NEO1 | |||
}} | }} |
Latest revision as of 23:23, 18 September 2015
Short description: | p2@NEO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NEO1_5end |
Coexpression cluster: | NA |
Association with transcript: | -111bp_to_ENST00000261908, ENST00000379842, NM_001172623, NM_001172624, NM_002499_5end |
EntrezGene: | NEO1 |
HGNC: | 7754 |
UniProt: | Q92859E7EUX3B7ZKM9Q59FP8B7ZKN0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.83e-07 | 22 |
germ cell cancer | 4.83e-07 | 22 |