FFCP PHASE1:Hg19::chr15:72522245..72522253,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:72522245..72522253,- to FFCP PHASE1:Hg19::chr15:72522245..72522253,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5315 | |EntrezGene=5315 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9021 | |HGNC=9021 | ||
|TSSclassifier=strong | |||
|UniProt=P14618 | |UniProt=P14618 | ||
|association_with_transcript=-182bp_to_NM_001206799,uc010bit.1_5end | |||
|cluster_id=chr15:72522245..72522253,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_15_at_PKM2_5end | |||
|id=chr15:72522245..72522253,- | |||
|ontology_enrichment_celltype=CL:0000860!4.32e-14!45;CL:0002057!1.18e-12!42;CL:0002087!2.41e-10!119;CL:0000738!2.09e-09!140;CL:0002194!8.67e-09!63;CL:0000576!8.67e-09!63;CL:0000040!8.67e-09!63;CL:0000559!8.67e-09!63;CL:0000766!1.22e-08!76;CL:0002031!3.48e-08!124;CL:0000839!5.32e-08!70;CL:0002009!5.50e-08!65;CL:0000557!1.22e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.49e-27;33!CL:0002057;8.49e-27;33!CL:0000473;1.17e-21;39!CL:0000234;1.17e-21;39!CL:0000576;6.45e-17;48!CL:0000766;1.91e-13;69!CL:0002087;2.76e-09;104!CL:0002393;1.44e-07;6!CL:0002397;1.44e-07;6!CL:0000226;7.77e-07;3!CL:0000842;7.77e-07;3!CL:0000763;7.98e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.75e-34,42;CL:0002057,3.75e-34,42;CL:0000473,2.70e-29,48;CL:0000234,2.70e-29,48;CL:0002194,1.69e-22,59;CL:0000576,1.69e-22,59;CL:0000040,1.69e-22,59;CL:0000559,1.69e-22,59;CL:0000766,4.40e-22,72;CL:0002009,1.27e-21,61;CL:0002087,2.68e-21,115;CL:0000738,2.69e-20,136;CL:0000839,1.15e-19,66;CL:0000557,2.63e-19,67;CL:0002031,7.67e-17,120;CL:0000037,3.64e-15,168;CL:0000988,4.66e-14,177;CL:0002032,1.65e-13,161;CL:0000837,1.65e-13,161;CL:0000763,4.08e-13,108;CL:0000049,4.08e-13,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.31e-25;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.38e-07!80 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.63e-16,76;UBERON:0001474,5.44e-15,82;UBERON:0002390,7.38e-15,98;UBERON:0003061,7.38e-15,98;UBERON:0004765,2.82e-13,90;UBERON:0002193,4.88e-13,108;UBERON:0002405,1.04e-12,93;UBERON:0001434,1.60e-11,100;UBERON:0003081,6.67e-07,203;UBERON:0002204,9.37e-07,167 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0,0,0.495065411840187,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.204000691244253,0.626909442956176,0.286235987131057,0.273748850145768,0.125542639594803,0.764134057479513,0.656804715599566,0.865818594450472,0,0.383829398097213,0.464448369948228,0.919421224478927,0.6024118375565,0.369754010166788,0.542270404062111,1.27952309238679,0.293600439334847,4.9859586767869,10.8294001633877,2.60413044859022,0,0,0,0.872389432677388,0.377875943688809,0.485168122375632,3.71886459049095,2.46700732813095,0.929119112685311,3.74000110018796,2.30544635876191,0,4.82643953031266,3.87290810150296,1.35426486594342,1.88242339542605,0.818718450173537,0.224723484445085,3.97909060082173,0.641858054152187,1.91801137739712,1.9791078011203,0.997318288108159,0,3.48251086354301,0.56738522469114,2.4912889959823,2.76373531782418,0,0.434377689410233,1.21079900526674,0,0.316462387440884,0.422510572623884,0.425208599930087,0.209658645508376,0.336985893439485,1.05123824989054,0.16072558669708,0,0,0,0,0,0,0.853460445133014,0,0,0,0,0,1.76171156811282,0.382273228125229,0,1.68152568894461,0,0.196709770113833,1.17903228824749,0.411202997999018,0.167186495390678,0,0,0,0,0,0,0,0,0.130059347559878,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0.12786256184353,0.361439152384566,0,0.289693037921647,0,0,0.283604451492204,0.221729397462564,0.087834785693126,0.130979075497713,0,0.370784442784429,0.324547393654683,0.174129737299267,0.132957960518865,0.238490624305342,0,0,0.198762407366705,0,0.347140501607594,0,0,0.275118041940067,0,0,0.35576626268671,0,0.402829317109147,0,0,0.367663080345869,0.81014194788176,0.267899184852239,0.22452937262617,0.225222960966644,0,0,0,0,3.87780264148325,0.872188104285069,0,0.379891534993739,0.662045904066094,0.286836620748814,0,0,0,0,0,0.269421344139376,0.163461903113459,0.454072282934794,0,0,0,0.570471821544449,0,0.23486899728753,0.161872944368132,0.280901613404497,0.204154171254893,0.245668634623536,0.103325781175765,0,0.494533858557114,0,0,0.336672227908132,0.750711119231785,0,0.438977620880838,0,0,0,0,0.213557388818567,0.423863802319124,0.300091096084402,0.309157587715317,0.515281080091258,0.18611685633159,0.506328996723799,0.292311015483596,0.504867548488229,0.184099797284599,0.161646056818812,0,0.302256294682921,0.169560592310488,0.193260853163297,0,0,0.243947412259191,0,0,0.310983165046111,0,0,0,1.28648187638577,0,0,0,0.354920400119532,0.337169380156203,0,0.220587945464788,0,0.237270619111097,0,0.392442930250692,0,0,0,0,0,0,0,0,0.882926198829301,0,0.171567810298526,0.109750285408626,0,0,0.0925884451585296,0.325808305310325,0,0,0.115930404975077,0.234817388471643,0.144366447761074,0.925971025153221,0,0,0,0.492434012174795,0.468008530278475,0.148631162288728,0,0,0,0.179117045405697,0,0,0.985326475791887,0.264145302039678,0,0.144119953416961,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0.205654985406647,0,0,0,0,0.1466765716419,0.129271715757778,0,0,0,0,0.257207374262142,0,0,0.142977993658148,0,0,0,0.710783897485092,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.821905290201534,0,0.448340575974109,0.394061520403854,1.2937654491571,0.513372145118994,0,0,0,0,0,0,0,1.65766205374414,0,0,0,0.207970861530807,0.356857977594324,0.157702415033935,0.468565659970853,0,0,0,0,0,0,0.587403472388222,0,1.03384013061444,3.66714141391649,0.640365346820666,0,1.66435439510497,0,0,0.153461973288062,0.280660094433074,0.384417447767103,0,0,0,0.308419387605311,0,0.0821271560138091,0,0,0.120859449591622,0.200506470303285,0.0920809889358963,0.114814448164607,0.546273504020151,0.131124414959424,0.451199612907412,0.15403067420883,0,0,0.211103257785751,0,0,0.215915916102139,0,0,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0.309123034943167,0,0.082509499920588,0,0,1.6068392984416,0.290012154876366,0.770243085573222,0.307007349452259,0.275673144969061,0.214840489736547,0.290033387828457,0.0852266274161009,0,0.495854746082934,0.192190067365106,0,0,0,0.31481234683064,0,0,0,0,0,0.429374660225974,1.116475108079,0.316379424718726,0,0.255897791311334,0.42793898803392,0.636406495851874,0.78494864019923,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0.974853958525138,0,0.136499911407986,0.565621727814851,0,0,0,1.31535265576129,0,0,0.405820753925408,0.30982349809975,0.563391205064483,0.143411352204052,0,0,0,0,0,0.379473173765715,0.349934720244983,0.192444225451024,1.34060455107157,0,0.188287601553558,0,0,0,0.459446800413919,0,0,0,0.238231775457789,0,0.648473311192717,0,0,0,0,0.735120647943095,0.185803175125719,0.577076851905779,0.497992903438899,0,0.399158742865633,0,0.211673582723883,0,0,0.228234679033192,0.313359791546046,0,0.169291777801603,0.321176150207399,0,0,0.343505344755765,0,0,0,0.19538809540204,0.835218521685727,0,0,0,0,0,0,0.121360521749513,0.780103689942349,0.284136146806413,0.23874448473769,0,0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| ||
|short_description=p15@PKM2 | |||
}} | }} |
Latest revision as of 22:37, 18 September 2015
Short description: | p15@PKM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_PKM2_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | -182bp_to_NM_001206799, uc010bit.1_5end |
EntrezGene: | PKM2 |
HGNC: | 9021 |
UniProt: | P14618 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.75e-34 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.75e-34 | 42 |
defensive cell | 2.70e-29 | 48 |
phagocyte | 2.70e-29 | 48 |
monopoietic cell | 1.69e-22 | 59 |
monocyte | 1.69e-22 | 59 |
monoblast | 1.69e-22 | 59 |
promonocyte | 1.69e-22 | 59 |
myeloid leukocyte | 4.40e-22 | 72 |
macrophage dendritic cell progenitor | 1.27e-21 | 61 |
nongranular leukocyte | 2.68e-21 | 115 |
leukocyte | 2.69e-20 | 136 |
myeloid lineage restricted progenitor cell | 1.15e-19 | 66 |
granulocyte monocyte progenitor cell | 2.63e-19 | 67 |
hematopoietic lineage restricted progenitor cell | 7.67e-17 | 120 |
hematopoietic stem cell | 3.64e-15 | 168 |
hematopoietic cell | 4.66e-14 | 177 |
hematopoietic oligopotent progenitor cell | 1.65e-13 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-13 | 161 |
myeloid cell | 4.08e-13 | 108 |
common myeloid progenitor | 4.08e-13 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.63e-16 | 76 |
bone element | 5.44e-15 | 82 |
hematopoietic system | 7.38e-15 | 98 |
blood island | 7.38e-15 | 98 |
skeletal element | 2.82e-13 | 90 |
hemolymphoid system | 4.88e-13 | 108 |
immune system | 1.04e-12 | 93 |
skeletal system | 1.60e-11 | 100 |
lateral plate mesoderm | 6.67e-07 | 203 |
musculoskeletal system | 9.37e-07 | 167 |