FFCP PHASE1:Hg19::chr15:67358269..67358272,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:67358269..67358272,+ to FFCP PHASE1:Hg19::chr15:67358269..67358272,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4088 | |EntrezGene=4088 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6769 | |HGNC=6769 | ||
|TSSclassifier=strong | |||
|UniProt=P84022,Q9P0T0 | |UniProt=P84022,Q9P0T0 | ||
|association_with_transcript=74bp_to_NM_005902,uc002aqj.2_5end | |||
|cluster_id=chr15:67358269..67358272,+ | |||
|description=CAGE_peak_15_at_SMAD3_5end | |||
|id=chr15:67358269..67358272,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.28e-10!42;CL:0000860!2.51e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.37e-07;33!CL:0002057;2.37e-07;33!CL:0002595;8.59e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.17e-09,42;CL:0002057,2.17e-09,42;CL:0000473,1.02e-07,48;CL:0000234,1.02e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;1.59e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.90e-09!118;UBERON:0001981!2.71e-08!60;UBERON:0007500!2.71e-08!60;UBERON:0004537!2.71e-08!60;UBERON:0006965!2.71e-08!60;UBERON:0000055!2.75e-08!69;UBERON:0003081!4.83e-08!216;UBERON:0001637!5.79e-07!42;UBERON:0003509!5.79e-07!42;UBERON:0004572!5.79e-07!42;UBERON:0000926!6.62e-07!448;UBERON:0004120!6.62e-07!448;UBERON:0006603!6.62e-07!448;UBERON:0004872!9.75e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0003513;3.53e-07;7!UBERON:0003834;8.59e-07;5!UBERON:0001533;8.59e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.89e-10,68;UBERON:0003081,9.38e-10,203;UBERON:0007500,3.27e-09,59;UBERON:0001981,3.27e-09,59;UBERON:0004537,3.27e-09,59;UBERON:0006965,3.27e-09,59;UBERON:0001637,7.11e-09,42;UBERON:0003509,7.11e-09,42;UBERON:0004572,7.11e-09,42;UBERON:0002049,2.31e-08,78;UBERON:0007798,2.31e-08,78;UBERON:0004872,1.76e-07,83;UBERON:0003914,2.72e-07,117;UBERON:0004535,4.03e-07,109;UBERON:0003513,4.81e-07,7;UBERON:0002204,8.05e-07,167;UBERON:0001009,9.22e-07,112 | |||
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| ||
|short_description=p15@SMAD3 | |||
}} | }} |
Latest revision as of 17:01, 18 September 2015
Short description: | p15@SMAD3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_SMAD3_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_NM_005902, uc002aqj.2_5end |
EntrezGene: | SMAD3 |
HGNC: | 6769 |
UniProt: | P84022Q9P0T0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.17e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.17e-09 | 42 |
defensive cell | 1.02e-07 | 48 |
phagocyte | 1.02e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.89e-10 | 68 |
lateral plate mesoderm | 9.38e-10 | 203 |
epithelial tube open at both ends | 3.27e-09 | 59 |
blood vessel | 3.27e-09 | 59 |
blood vasculature | 3.27e-09 | 59 |
vascular cord | 3.27e-09 | 59 |
artery | 7.11e-09 | 42 |
arterial blood vessel | 7.11e-09 | 42 |
arterial system | 7.11e-09 | 42 |
vasculature | 2.31e-08 | 78 |
vascular system | 2.31e-08 | 78 |
splanchnic layer of lateral plate mesoderm | 1.76e-07 | 83 |
epithelial tube | 2.72e-07 | 117 |
cardiovascular system | 4.03e-07 | 109 |
trunk blood vessel | 4.81e-07 | 7 |
musculoskeletal system | 8.05e-07 | 167 |
circulatory system | 9.22e-07 | 112 |