FFCP PHASE1:Hg19::chr15:64386261..64386283,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:64386261..64386283,+ to FFCP PHASE1:Hg19::chr15:64386261..64386283,+: NSchange) |
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(12 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6642 | |EntrezGene=6642 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11172 | |HGNC=11172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-38bp_to_ENST00000560829_5end | |||
|cluster_id=chr15:64386261..64386283,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_4_at_SNX1_5end | |||
|id=chr15:64386261..64386283,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000136;6.96e-07;13 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.17e-10;1!DOID:0070004;2.17e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,4.33e-10,1;DOID:0070004,4.33e-10,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001875;4.94e-19;2!UBERON:0006514;4.94e-19;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001875,2.86e-19,2;UBERON:0006514,2.86e-19,2 | |||
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| 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| ||
|short_description=p4@SNX1 | |||
}} | }} |
Latest revision as of 13:08, 18 September 2015
Short description: | p4@SNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNX1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -38bp_to_ENST00000560829_5end |
EntrezGene: | SNX1 |
HGNC: | 11172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
globus pallidus | 2.86e-19 | 2 |
pallidum | 2.86e-19 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 4.33e-10 | 1 |
myeloma | 4.33e-10 | 1 |