FFCP PHASE1:Hg19::chr15:55880566..55880639,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:55880566..55880639,- to FFCP PHASE1:Hg19::chr15:55880566..55880639,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=26108 | |EntrezGene=26108 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30256 | |HGNC=30256 | ||
|TSSclassifier=strong | |||
|UniProt=A7Y2D6 | |UniProt=A7Y2D6 | ||
|association_with_transcript=-57bp_to_ENST00000401688_5end | |||
|cluster_id=chr15:55880566..55880639,- | |||
|description=CAGE_peak_1_at_PYGO1_5end | |||
|id=chr15:55880566..55880639,- | |||
|ontology_enrichment_celltype=CL:0000055!9.32e-21!180;CL:0000057!4.68e-13!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.68e-13,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.19e-16!94;UBERON:0001016!7.19e-16!94;UBERON:0000481!1.25e-15!347;UBERON:0005743!2.87e-15!86;UBERON:0001017!8.35e-15!82;UBERON:0000475!9.79e-15!365;UBERON:0007023!2.87e-14!115;UBERON:0000924!3.21e-14!173;UBERON:0006601!3.21e-14!173;UBERON:0004121!5.25e-14!169;UBERON:0002346!2.25e-13!90;UBERON:0001049!2.60e-13!57;UBERON:0005068!2.60e-13!57;UBERON:0006241!2.60e-13!57;UBERON:0007135!2.60e-13!57;UBERON:0003075!2.75e-13!86;UBERON:0007284!2.75e-13!86;UBERON:0002616!5.93e-13!59;UBERON:0000955!8.54e-13!69;UBERON:0006238!8.54e-13!69;UBERON:0000033!8.73e-13!123;UBERON:0000153!4.04e-12!129;UBERON:0007811!4.04e-12!129;UBERON:0000119!5.77e-11!312;UBERON:0000468!8.61e-11!659;UBERON:0000483!9.33e-11!309;UBERON:0000477!1.16e-10!286;UBERON:0003080!2.45e-09!42;UBERON:0002780!3.97e-09!41;UBERON:0001890!3.97e-09!41;UBERON:0006240!3.97e-09!41;UBERON:0000467!1.02e-08!625;UBERON:0000480!1.62e-08!626;UBERON:0003056!2.12e-08!61;UBERON:0000922!3.00e-08!612;UBERON:0004111!3.04e-08!241;UBERON:0002020!6.24e-08!34;UBERON:0003528!6.24e-08!34;UBERON:0002050!7.24e-08!605;UBERON:0005423!7.24e-08!605;UBERON:0000923!1.46e-07!604;UBERON:0005291!1.46e-07!604;UBERON:0006598!1.46e-07!604;UBERON:0002532!1.46e-07!604;UBERON:0002791!1.58e-07!33;UBERON:0000025!1.71e-07!194;UBERON:0001893!2.28e-07!34;UBERON:0000062!3.71e-07!511;UBERON:0000914!5.95e-07!83;UBERON:0002329!5.95e-07!83;UBERON:0003077!5.95e-07!83;UBERON:0003059!5.95e-07!83;UBERON:0007282!5.95e-07!83;UBERON:0009618!5.95e-07!83;UBERON:0007285!5.95e-07!83;UBERON:0001869!8.60e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.76e-07;34!UBERON:0002020;2.76e-07;34!UBERON:0002780;4.73e-07;41!UBERON:0001890;4.73e-07;41!UBERON:0000073;5.91e-07;53!UBERON:0002616;5.91e-07;53!UBERON:0002791;6.91e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,5.21e-15,132;UBERON:0001016,5.15e-14,89;UBERON:0001017,5.89e-14,81;UBERON:0007023,6.17e-13,114;UBERON:0001049,2.30e-12,56;UBERON:0005068,2.30e-12,56;UBERON:0006241,2.30e-12,56;UBERON:0007135,2.30e-12,56;UBERON:0004121,3.05e-12,171;UBERON:0000924,3.05e-12,171;UBERON:0006601,3.05e-12,171;UBERON:0000955,8.51e-12,68;UBERON:0006238,8.51e-12,68;UBERON:0002346,1.55e-11,86;UBERON:0003075,1.73e-11,82;UBERON:0007284,1.73e-11,82;UBERON:0000073,3.53e-11,53;UBERON:0002616,3.53e-11,53;UBERON:0002780,1.37e-08,41;UBERON:0001890,1.37e-08,41;UBERON:0003080,1.37e-08,41;UBERON:0006240,1.37e-08,41;UBERON:0003528,6.47e-08,34;UBERON:0002020,6.47e-08,34;UBERON:0011216,6.52e-08,223;UBERON:0010371,1.51e-07,104;UBERON:0002791,2.94e-07,32;UBERON:0001893,5.59e-07,34 | |||
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| ||
|short_description=p1@PYGO1 | |||
}} | }} |
Latest revision as of 04:34, 18 September 2015
Short description: | p1@PYGO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PYGO1_5end |
Coexpression cluster: | NA |
Association with transcript: | -57bp_to_ENST00000401688_5end |
EntrezGene: | PYGO1 |
HGNC: | 30256 |
UniProt: | A7Y2D6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.68e-13 | 76 |
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 5.21e-15 | 132 |
nervous system | 5.15e-14 | 89 |
central nervous system | 5.89e-14 | 81 |
adult organism | 6.17e-13 | 114 |
neural tube | 2.30e-12 | 56 |
neural rod | 2.30e-12 | 56 |
future spinal cord | 2.30e-12 | 56 |
neural keel | 2.30e-12 | 56 |
ectoderm-derived structure | 3.05e-12 | 171 |
ectoderm | 3.05e-12 | 171 |
presumptive ectoderm | 3.05e-12 | 171 |
brain | 8.51e-12 | 68 |
future brain | 8.51e-12 | 68 |
neurectoderm | 1.55e-11 | 86 |
neural plate | 1.73e-11 | 82 |
presumptive neural plate | 1.73e-11 | 82 |
regional part of nervous system | 3.53e-11 | 53 |
regional part of brain | 3.53e-11 | 53 |
regional part of forebrain | 1.37e-08 | 41 |
forebrain | 1.37e-08 | 41 |
anterior neural tube | 1.37e-08 | 41 |
future forebrain | 1.37e-08 | 41 |
brain grey matter | 6.47e-08 | 34 |
gray matter | 6.47e-08 | 34 |
organ system subdivision | 6.52e-08 | 223 |
ecto-epithelium | 1.51e-07 | 104 |
regional part of telencephalon | 2.94e-07 | 32 |
telencephalon | 5.59e-07 | 34 |