FFCP PHASE1:Hg19::chr15:50358642..50358649,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:50358642..50358649,+ to FFCP PHASE1:Hg19::chr15:50358642..50358649,+: NSchange) |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr15:50358642..50358649,+ | |||
|coexpression_cluster_id=C82 | |||
|description=CAGE_peak_at_chr15:50358642..50358649,+ | |||
|id=chr15:50358642..50358649,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.10e-49!42;CL:0000860!1.12e-45!45;CL:0000766!1.25e-42!76;CL:0000557!1.20e-39!71;CL:0000839!2.54e-37!70;CL:0000763!6.94e-37!112;CL:0000049!6.94e-37!112;CL:0002009!1.42e-34!65;CL:0000738!1.46e-33!140;CL:0002194!6.32e-33!63;CL:0000576!6.32e-33!63;CL:0000040!6.32e-33!63;CL:0000559!6.32e-33!63;CL:0000988!1.30e-31!182;CL:0000037!1.50e-30!172;CL:0000566!1.50e-30!172;CL:0002032!1.29e-28!165;CL:0000837!1.29e-28!165;CL:0002031!2.14e-26!124;CL:0002087!1.92e-20!119;CL:0002393!2.93e-19!9;CL:0002397!2.93e-19!9;CL:0000767!4.35e-13!3;CL:0000623!8.24e-12!3;CL:0000825!8.24e-12!3;CL:0000134!3.81e-11!358;CL:0000875!4.25e-11!3;CL:0002396!4.25e-11!3;CL:0002320!9.69e-11!365;CL:0000034!1.60e-10!444;CL:0000219!2.60e-09!390;CL:0000048!6.62e-09!430;CL:0000723!1.22e-08!436;CL:0002274!1.01e-07!5;CL:0000457!1.01e-07!5;CL:0002191!1.01e-07!5;CL:0000097!1.01e-07!5;CL:0000831!1.01e-07!5;CL:0002028!1.01e-07!5;CL:0000453!2.80e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000767;3.64e-60;3!CL:0000094;4.10e-23;8!CL:0000037;5.16e-21;1!CL:0001024;5.16e-21;1!CL:0000081;5.11e-17;11!CL:0002393;3.97e-14;6!CL:0002397;3.97e-14;6!CL:0000766;1.13e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000767,2.43e-60,3;CL:0000094,3.53e-23,8;CL:0001024,7.72e-21,1;CL:0000081,4.59e-17,11;CL:0000766,4.80e-17,72;CL:0000763,2.63e-11,108;CL:0000049,2.63e-11,108;CL:0002393,9.24e-10,9;CL:0002397,9.24e-10,9;CL:0000037,4.65e-09,168;CL:0000738,6.55e-09,136;CL:0000988,1.42e-08,177;CL:0000860,6.72e-08,42;CL:0002057,6.72e-08,42;CL:0000839,1.78e-07,66;CL:0002032,1.83e-07,161;CL:0000837,1.83e-07,161;CL:0000557,2.29e-07,67;CL:0000473,6.02e-07,48;CL:0000234,6.02e-07,48 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.96e-37!80;UBERON:0001474!5.02e-34!86;UBERON:0002390!6.58e-34!102;UBERON:0003061!6.58e-34!102;UBERON:0002193!3.68e-30!112;UBERON:0004765!7.19e-28!101;UBERON:0001434!7.19e-28!101;UBERON:0002405!1.44e-23!115;UBERON:0002204!6.47e-14!167;UBERON:0003081!9.71e-13!216;UBERON:0002384!3.46e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.92e-09,76;UBERON:0001474,1.83e-08,82;UBERON:0004765,1.05e-07,90;UBERON:0002405,1.87e-07,93;UBERON:0002390,4.53e-07,98;UBERON:0003061,4.53e-07,98;UBERON:0001434,6.31e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.91914699048606,2.78669021968937,0,0,0,0,0,1.17440175733939,1.66198622559563,0.401088894940283,1.30206522429511,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.945928919554341,0.344745680736619,1.93645405075148,0,0.376484679085209,0,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.36018566109342,1.91914699048606,2.78669021968937,0,0,0,0,0,1.17440175733939,1.66198622559563,0.401088894940283,1.30206522429511,0,0,0,0,0,0,0,0,0.309706370895104,0.28769239232215,0.256160706529101,0.945928919554341,0.344745680736619,1.93645405075148,0,0.376484679085209,0,0,0.306083892370903,0.641858054152187,1.27867425159808,0,0,0.426224750532694,0,0,0.622822248995575,0.251248665256743,0.521482918420201,0.434377689410233,0,0,0.949387162322653,0,0,0.209658645508376,0.112328631146495,0,0.32145117339416,0.285012743741249,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,0.560508562981536,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829312462163088,0.864719720501769,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.641715181398742,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333698283423817,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0.104421949505455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.674921674654501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265729680626726,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.250707539292375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr15:50358642..50358649,+ | |||
}} | }} |
Latest revision as of 02:14, 25 July 2015
Short description: | p@chr15:50358642..50358649, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:50358642..50358649, + |
Coexpression cluster: | C82_Basophils_CD14_Eosinophils_Natural_Peripheral_immature_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
basophil | 2.43e-60 | 3 |
granulocyte | 3.53e-23 | 8 |
CD34-positive, CD38-negative hematopoietic stem cell | 7.72e-21 | 1 |
blood cell | 4.59e-17 | 11 |
myeloid leukocyte | 4.80e-17 | 72 |
myeloid cell | 2.63e-11 | 108 |
common myeloid progenitor | 2.63e-11 | 108 |
intermediate monocyte | 9.24e-10 | 9 |
CD14-positive, CD16-positive monocyte | 9.24e-10 | 9 |
hematopoietic stem cell | 4.65e-09 | 168 |
leukocyte | 6.55e-09 | 136 |
hematopoietic cell | 1.42e-08 | 177 |
classical monocyte | 6.72e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.72e-08 | 42 |
myeloid lineage restricted progenitor cell | 1.78e-07 | 66 |
hematopoietic oligopotent progenitor cell | 1.83e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.83e-07 | 161 |
granulocyte monocyte progenitor cell | 2.29e-07 | 67 |
defensive cell | 6.02e-07 | 48 |
phagocyte | 6.02e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.92e-09 | 76 |
bone element | 1.83e-08 | 82 |
skeletal element | 1.05e-07 | 90 |
immune system | 1.87e-07 | 93 |
hematopoietic system | 4.53e-07 | 98 |
blood island | 4.53e-07 | 98 |
skeletal system | 6.31e-07 | 100 |