FFCP PHASE1:Hg19::chr15:34630234..34630280,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:34630234..34630280,- to FFCP PHASE1:Hg19::chr15:34630234..34630280,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9990 | |EntrezGene=9990 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10914 | |HGNC=10914 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHW9,Q6NSI7 | |UniProt=Q9UHW9,Q6NSI7 | ||
|association_with_transcript=0bp_to_ENST00000397702,ENST00000558667,ENST00000559236,ENST00000561080,ENST00000561120,NM_001042495,uc001zid.2,uc010bau.2_5end | |||
|cluster_id=chr15:34630234..34630280,- | |||
|description=CAGE_peak_4_at_SLC12A6_5end | |||
|id=chr15:34630234..34630280,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.18e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:3095,6.48e-07,22;DOID:2994,6.48e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.90e-34!94;UBERON:0001016!1.90e-34!94;UBERON:0005743!1.86e-31!86;UBERON:0001017!1.86e-31!82;UBERON:0001049!3.33e-30!57;UBERON:0005068!3.33e-30!57;UBERON:0006241!3.33e-30!57;UBERON:0007135!3.33e-30!57;UBERON:0000955!2.19e-28!69;UBERON:0006238!2.19e-28!69;UBERON:0002616!1.81e-26!59;UBERON:0002780!1.19e-24!41;UBERON:0001890!1.19e-24!41;UBERON:0006240!1.19e-24!41;UBERON:0003080!5.55e-24!42;UBERON:0002346!2.18e-23!90;UBERON:0003075!3.20e-22!86;UBERON:0007284!3.20e-22!86;UBERON:0007023!1.64e-21!115;UBERON:0001893!5.00e-21!34;UBERON:0002020!6.74e-21!34;UBERON:0003528!6.74e-21!34;UBERON:0002791!2.35e-20!33;UBERON:0001869!6.49e-20!32;UBERON:0003056!5.47e-18!61;UBERON:0000153!3.82e-17!129;UBERON:0007811!3.82e-17!129;UBERON:0000956!6.18e-16!25;UBERON:0000203!6.18e-16!25;UBERON:0000924!6.37e-16!173;UBERON:0006601!6.37e-16!173;UBERON:0000033!2.87e-15!123;UBERON:0004121!6.20e-15!169;UBERON:0002619!6.40e-15!22;UBERON:0000025!3.48e-14!194;UBERON:0001950!6.50e-14!20;UBERON:0004111!6.66e-10!241;UBERON:0000483!1.64e-09!309;UBERON:0000477!1.98e-09!286;UBERON:0000119!3.02e-09!312;UBERON:0003076!1.99e-07!15;UBERON:0003057!1.99e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.82e-22;34!UBERON:0001869;8.88e-22;32!UBERON:0003528;1.03e-21;34!UBERON:0002020;1.03e-21;34!UBERON:0002791;1.38e-21;32!UBERON:0002780;1.96e-21;41!UBERON:0001890;1.96e-21;41!UBERON:0000073;6.37e-20;53!UBERON:0002616;6.37e-20;53!UBERON:0000956;3.44e-19;25!UBERON:0000203;3.44e-19;25!UBERON:0002619;9.32e-18;22!UBERON:0001950;1.65e-16;20!UBERON:0000955;3.44e-15;68!UBERON:0001016;6.29e-15;83!UBERON:0001017;1.28e-14;75!UBERON:0000922;3.12e-08;49!UBERON:0000125;2.23e-07;9!UBERON:0002308;2.23e-07;9!UBERON:0002420;2.48e-07;9!UBERON:0007245;2.48e-07;9!UBERON:0010009;2.48e-07;9!UBERON:0010011;2.48e-07;9!UBERON:0000454;2.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.09e-39,89;UBERON:0001049,2.79e-36,56;UBERON:0005068,2.79e-36,56;UBERON:0006241,2.79e-36,56;UBERON:0007135,2.79e-36,56;UBERON:0001017,3.75e-36,81;UBERON:0000073,2.18e-34,53;UBERON:0002616,2.18e-34,53;UBERON:0000955,1.47e-32,68;UBERON:0006238,1.47e-32,68;UBERON:0002346,2.53e-29,86;UBERON:0002780,3.71e-29,41;UBERON:0001890,3.71e-29,41;UBERON:0003080,3.71e-29,41;UBERON:0006240,3.71e-29,41;UBERON:0003075,6.39e-28,82;UBERON:0007284,6.39e-28,82;UBERON:0001893,8.05e-25,34;UBERON:0003528,1.15e-24,34;UBERON:0002020,1.15e-24,34;UBERON:0001869,1.73e-23,32;UBERON:0002791,3.09e-23,32;UBERON:0003056,7.29e-23,61;UBERON:0007023,1.91e-20,114;UBERON:0004121,5.94e-20,171;UBERON:0000924,5.94e-20,171;UBERON:0006601,5.94e-20,171;UBERON:0010371,1.48e-19,104;UBERON:0000956,9.88e-19,25;UBERON:0000203,9.88e-19,25;UBERON:0010314,3.93e-18,132;UBERON:0002619,1.62e-17,22;UBERON:0000025,9.33e-17,192;UBERON:0001950,2.58e-16,20;UBERON:0011216,4.61e-16,223;UBERON:0000483,4.01e-12,306;UBERON:0004111,4.87e-12,240;UBERON:0000119,1.54e-11,309;UBERON:0003076,2.43e-08,15;UBERON:0003057,2.43e-08,15;UBERON:0000125,2.28e-07,9;UBERON:0002308,2.28e-07,9;UBERON:0002420,2.38e-07,9;UBERON:0007245,2.38e-07,9;UBERON:0010009,2.38e-07,9;UBERON:0010011,2.38e-07,9;UBERON:0000454,2.38e-07,9;UBERON:0004732,4.51e-07,13;UBERON:0000922,7.74e-07,592 | |||
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| ||
|short_description=p4@SLC12A6 | |||
}} | }} |
Latest revision as of 06:48, 17 September 2015
Short description: | p4@SLC12A6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC12A6_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397702, ENST00000558667, ENST00000559236, ENST00000561080, ENST00000561120, NM_001042495, uc001zid.2, uc010bau.2_5end |
EntrezGene: | SLC12A6 |
HGNC: | 10914 |
UniProt: | Q9UHW9Q6NSI7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 6.48e-07 | 22 |
germ cell cancer | 6.48e-07 | 22 |