FFCP PHASE1:Hg19::chr15:101418003..101418019,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=220 | |EntrezGene=220 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=409 | |HGNC=409 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=84bp_to_ENST00000561338_5end | |||
|cluster_id=chr15:101418003..101418019,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_5_at_ALDH1A3_5end | |||
|id=chr15:101418003..101418019,+ | |||
|ontology_enrichment_celltype=CL:0002076!1.02e-23!43;CL:0000223!1.15e-18!59;CL:0000066!1.72e-17!254;CL:0002368!2.64e-16!13;CL:0000317!1.74e-10!2;CL:1000448!1.74e-10!2;CL:0002308!1.74e-10!2;CL:0002140!1.74e-10!2;CL:0002202!2.09e-08!9;CL:0002632!2.09e-08!9;CL:0002251!1.99e-07!21;CL:0002231!2.60e-07!3;CL:0002328!2.94e-07!3;CL:0000076!4.40e-07!62;CL:0002621!5.28e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1001319;4.61e-26;1!CL:1000600;4.61e-26;1 | |||
|ontology_enrichment_celltype_v019_2=CL:1001319,4.61e-26,1;CL:1000600,4.61e-26,1;CL:0000076,9.99e-07,63 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!4.58e-26!14;DOID:305!2.21e-16!106;DOID:0050687!7.88e-11!143;DOID:4468!8.15e-11!2 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.12e-28;14!DOID:4468;8.28e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.04e-28,14;DOID:305,5.98e-15,106;DOID:4468,8.28e-14,2;DOID:0050687,4.45e-11,143 | |||
|ontology_enrichment_uberon=UBERON:0003343!3.91e-11!4;UBERON:0004785!3.91e-11!4;UBERON:0002419!1.74e-10!2;UBERON:0007771!1.74e-10!2;UBERON:0003297!1.74e-10!2;UBERON:0001821!1.74e-10!2;UBERON:0003487!1.74e-10!2;UBERON:0001820!1.74e-10!2;UBERON:0005089!1.74e-10!2;UBERON:0005088!1.74e-10!2;UBERON:0004119!4.86e-10!169;UBERON:0000925!4.86e-10!169;UBERON:0006595!4.86e-10!169;UBERON:0000344!9.12e-10!12;UBERON:0001004!2.16e-09!72;UBERON:0000161!2.95e-09!35;UBERON:0003729!5.38e-09!5;UBERON:0001007!3.20e-08!155;UBERON:0001555!3.20e-08!155;UBERON:0007026!3.20e-08!155;UBERON:0007196!6.27e-08!14;UBERON:0001558!6.27e-08!14;UBERON:0004815!2.94e-07!3;UBERON:0002031!2.94e-07!3;UBERON:0001949!5.28e-07!3;UBERON:0005911!7.70e-07!82;UBERON:0005153!8.00e-07!37;UBERON:0000065!9.44e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;4.61e-26;1!UBERON:0001256;4.61e-26;1!UBERON:0001259;4.61e-26;1!UBERON:0000997;9.79e-26;1!UBERON:0005056;9.79e-26;1!UBERON:0004176;9.79e-26;1!UBERON:0001255;9.40e-14;2!UBERON:0001556;9.40e-14;2!UBERON:0003343;1.40e-07;4!UBERON:0004785;1.40e-07;4!UBERON:0002394;1.92e-07;4!UBERON:0003928;1.92e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,4.61e-26,1;UBERON:0001256,4.61e-26,1;UBERON:0001259,4.61e-26,1;UBERON:0000997,9.79e-26,1;UBERON:0005056,9.79e-26,1;UBERON:0001255,9.40e-14,2;UBERON:0001556,9.40e-14,2;UBERON:0003343,1.40e-07,4;UBERON:0004785,1.40e-07,4 | |||
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|short_description=p5@ALDH1A3 | |||
}} | }} |
Latest revision as of 22:12, 16 September 2015
Short description: | p5@ALDH1A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ALDH1A3_5end |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | 84bp_to_ENST00000561338_5end |
EntrezGene: | ALDH1A3 |
HGNC: | 409 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 4.61e-26 | 1 |
lower urinary tract cell | 4.61e-26 | 1 |
squamous epithelial cell | 9.99e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 4.61e-26 | 1 |
wall of urinary bladder | 4.61e-26 | 1 |
mucosa of urinary bladder | 4.61e-26 | 1 |
mammalian vulva | 9.79e-26 | 1 |
external female genitalia | 9.79e-26 | 1 |
urinary bladder | 9.40e-14 | 2 |
lower urinary tract | 9.40e-14 | 2 |
mucosa of oral region | 1.40e-07 | 4 |
respiratory system mucosa | 1.40e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.04e-28 | 14 |
carcinoma | 5.98e-15 | 106 |
clear cell adenocarcinoma | 8.28e-14 | 2 |
cell type cancer | 4.45e-11 | 143 |