FFCP PHASE1:Hg19::chr14:93398903..93398941,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:93398903..93398941,+ to FFCP PHASE1:Hg19::chr14:93398903..93398941,+: NSchange) |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-6bp_to_BC106953_5end | |||
|cluster_id=chr14:93398903..93398941,+ | |||
|description=CAGE_peak_1_at_BC106953_5end | |||
|id=chr14:93398903..93398941,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002591;7.21e-08;1!CL:0000167;1.44e-07;1!CL:0000164;1.44e-07;1!CL:0000502;1.44e-07;1!CL:0000172;1.44e-07;1!CL:0000173;1.44e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,9.10e-08,1;CL:0000167,1.99e-07,1;CL:0000164,1.99e-07,1;CL:0000502,1.99e-07,1;CL:0000172,1.99e-07,1;CL:0000173,1.99e-07,1;CL:0002351,1.99e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.44e-07;1 | |||
|ontology_enrichment_disease=DOID:169!6.65e-07!6 | |||
|ontology_enrichment_disease_v019=DOID:4430;1.44e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.99e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002619!1.38e-34!22;UBERON:0001950!1.96e-34!20;UBERON:0002780!2.38e-30!41;UBERON:0001890!2.38e-30!41;UBERON:0006240!2.38e-30!41;UBERON:0000956!5.44e-30!25;UBERON:0000203!5.44e-30!25;UBERON:0003080!1.76e-29!42;UBERON:0001893!5.75e-29!34;UBERON:0001869!3.27e-28!32;UBERON:0002791!5.76e-27!33;UBERON:0002020!5.41e-26!34;UBERON:0003528!5.41e-26!34;UBERON:0007023!7.23e-26!115;UBERON:0001049!8.19e-26!57;UBERON:0005068!8.19e-26!57;UBERON:0006241!8.19e-26!57;UBERON:0007135!8.19e-26!57;UBERON:0000955!2.44e-25!69;UBERON:0006238!2.44e-25!69;UBERON:0000073!2.50e-25!94;UBERON:0001016!2.50e-25!94;UBERON:0001017!2.85e-25!82;UBERON:0002616!1.07e-24!59;UBERON:0005743!1.06e-23!86;UBERON:0003056!4.28e-20!61;UBERON:0003075!4.04e-19!86;UBERON:0007284!4.04e-19!86;UBERON:0002346!6.44e-18!90;UBERON:0000200!4.95e-17!6;UBERON:0000033!4.93e-13!123;UBERON:0000153!4.97e-13!129;UBERON:0007811!4.97e-13!129;UBERON:0004121!7.57e-13!169;UBERON:0000924!2.49e-12!173;UBERON:0006601!2.49e-12!173;UBERON:0001871!2.75e-12!7;UBERON:0002771!1.26e-09!3;UBERON:0001872!2.22e-09!5;UBERON:0002021!5.02e-09!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.12e-57;20!UBERON:0002619;1.98e-52;22!UBERON:0000956;4.54e-46;25!UBERON:0000203;4.54e-46;25!UBERON:0000200;1.20e-38;6!UBERON:0001869;3.70e-36;32!UBERON:0001893;1.86e-33;34!UBERON:0002791;6.30e-30;32!UBERON:0003528;4.94e-29;34!UBERON:0002020;4.94e-29;34!UBERON:0001870;6.29e-20;3!UBERON:0002780;1.85e-19;41!UBERON:0001890;1.85e-19;41!UBERON:0001871;2.77e-15;6!UBERON:0002771;2.15e-14;2!UBERON:0002702;4.32e-14;2!UBERON:0001017;1.17e-12;75!UBERON:0001872;1.80e-12;5!UBERON:0002021;2.71e-12;5!UBERON:0000073;3.17e-12;53!UBERON:0002616;3.17e-12;53!UBERON:0000955;1.38e-11;68!UBERON:0002581;7.21e-08;1!UBERON:0002902;7.21e-08;1!UBERON:0003112;7.21e-08;1!UBERON:0011158;7.21e-08;1!UBERON:0009899;7.21e-08;1!UBERON:0003128;7.21e-08;1!UBERON:0001703;7.21e-08;1!UBERON:0002241;7.21e-08;1!UBERON:0002022;1.44e-07;1!UBERON:0007190;1.44e-07;1!UBERON:0011216;1.74e-07;132!UBERON:0001016;3.10e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001950,8.46e-58,20;UBERON:0002619,1.54e-52,22;UBERON:0000956,3.63e-46,25;UBERON:0000203,3.63e-46,25;UBERON:0001869,4.02e-41,32;UBERON:0000200,8.70e-39,6;UBERON:0001893,1.33e-38,34;UBERON:0002791,8.51e-36,32;UBERON:0003528,1.35e-33,34;UBERON:0002020,1.35e-33,34;UBERON:0002780,1.12e-31,41;UBERON:0001890,1.12e-31,41;UBERON:0003080,1.12e-31,41;UBERON:0006240,1.12e-31,41;UBERON:0000073,5.66e-24,53;UBERON:0002616,5.66e-24,53;UBERON:0000955,2.73e-23,68;UBERON:0006238,2.73e-23,68;UBERON:0001049,1.49e-22,56;UBERON:0005068,1.49e-22,56;UBERON:0006241,1.49e-22,56;UBERON:0007135,1.49e-22,56;UBERON:0001017,1.26e-21,81;UBERON:0003056,1.71e-20,61;UBERON:0001870,5.01e-20,3;UBERON:0001016,3.72e-19,89;UBERON:0003075,9.95e-17,82;UBERON:0007284,9.95e-17,82;UBERON:0007023,1.07e-16,114;UBERON:0002346,8.22e-16,86;UBERON:0001871,2.02e-15,6;UBERON:0002771,1.89e-14,2;UBERON:0010371,2.56e-14,104;UBERON:0002702,4.18e-14,2;UBERON:0001872,1.91e-12,5;UBERON:0002021,3.04e-12,5;UBERON:0004121,7.93e-11,171;UBERON:0000924,7.93e-11,171;UBERON:0006601,7.93e-11,171;UBERON:0010314,1.26e-10,132;UBERON:0011216,1.48e-10,223;UBERON:0002581,6.10e-08,1;UBERON:0002902,6.97e-08,1;UBERON:0009899,6.97e-08,1;UBERON:0003112,7.45e-08,1;UBERON:0011158,7.45e-08,1;UBERON:0003128,7.45e-08,1;UBERON:0001703,7.45e-08,1;UBERON:0002241,7.45e-08,1;UBERON:0004761,7.45e-08,1;UBERON:0009617,7.45e-08,1;UBERON:0007190,1.44e-07,1;UBERON:0002022,1.54e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26016233240486,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,3.52705846995986,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,2.78304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4132393686937,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0,0,0,1.89932387867636,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,1.45798935979259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.56255156294123,4.38168257472749,0,0,0.124192805882767,0,0,0,0,0,0.936669811613763,1.30428925749743,0,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70078682915885,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0.539124056983409,0,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0.513833800771676,0,3.19267718114303,1.23069818544453,0.252071696221718,2.48966108871184,2.42213468447777,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.55336444622308,2.34323429584154,3.10030194751776,0.951237152908602,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,2.69668371607681,0,0,0,0,0,2.73947616152849,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0.452888530700021,0.154348316215889,0.437119121007915,1.88126918544609,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90376172534561,0,2.1161073620616,0,0,0.432626562123789,0,0,0,0,0,0,0,7.65364852004218,11.2544934665595,0,0.103432995861895,0,0.23806443146374,0,0,0,0.12729431655633,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.40545596294053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.26016233240486,0.551365343546124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,0,0,0,0,3.52705846995986,0,0,0,0,0,0,0.0986434056369336,0,0,1.93866549219044,2.78304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4132393686937,0,0,0.846452843541768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,3.62972148145992,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0.171986032471617,0,0,0,0,0,0,0,0,1.89932387867636,0,0,0,0,0,0,3.08870996151536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0.275078873194468,0,0,0,1.45798935979259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.56255156294123,4.38168257472749,0,0,0.124192805882767,0,0,0,0,0,0.936669811613763,1.30428925749743,0,0,0.554805861502613,0,0,0,0,0.302461847526478,0,0,0,0,0.310525913752519,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.70078682915885,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0.127894371303652,0.539124056983409,0,0.327628914576042,0,0,0,0,0,0,0.80057074828547,0,0,0.513833800771676,0,3.19267718114303,1.23069818544453,0.252071696221718,2.48966108871184,2.42213468447777,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,1.55336444622308,2.34323429584154,3.10030194751776,0.951237152908602,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0.271878931907327,2.69668371607681,0,0,0,0,0,2.73947616152849,0,0,0,0.316027223465453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0.118920090777569,0,0,0.452888530700021,0.154348316215889,0.437119121007915,1.88126918544609,0,1.17838273550813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90376172534561,0,2.1161073620616,0,0,0.432626562123789,0,0,0,0,0,0,0,7.65364852004218,11.2544934665595,0,0.103432995861895,0,0.23806443146374,0,0,0,0.12729431655633,0.606351566874658,0,0,0,0,0,0,0,0,0,0,0.366724332548599,0,0,0,0 | ||
|short_description=p1@BC106953 | |||
}} | }} |
Latest revision as of 23:46, 24 July 2015
Short description: | p1@BC106953 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_BC106953_5end |
Coexpression cluster: | NA |
Association with transcript: | -6bp_to_BC106953_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 9.10e-08 | 1 |
peptide hormone secreting cell | 1.99e-07 | 1 |
enteroendocrine cell | 1.99e-07 | 1 |
type D enteroendocrine cell | 1.99e-07 | 1 |
somatostatin secreting cell | 1.99e-07 | 1 |
pancreatic D cell | 1.99e-07 | 1 |
progenitor cell of endocrine pancreas | 1.99e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.99e-07 | 1 |