FFCP PHASE1:Hg19::chr14:91883918..91883957,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:91883918..91883957,- to FFCP PHASE1:Hg19::chr14:91883918..91883957,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=440193 | |EntrezGene=440193 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19967 | |HGNC=19967 | ||
|TSSclassifier=strong | |||
|UniProt=Q0P665 | |UniProt=Q0P665 | ||
|association_with_transcript=-228bp_to_ENST00000389856_5end | |||
|cluster_id=chr14:91883918..91883957,- | |||
|coexpression_cluster_id=C57 | |||
|description=CAGE_peak_3_at_CCDC88C_5end | |||
|id=chr14:91883918..91883957,- | |||
|ontology_enrichment_celltype=CL:0002087!6.73e-44!119;CL:0000738!7.84e-44!140;CL:0000037!5.37e-43!172;CL:0000566!5.37e-43!172;CL:0000988!9.13e-41!182;CL:0002031!9.92e-41!124;CL:0002032!1.55e-40!165;CL:0000837!1.55e-40!165;CL:0000542!7.46e-31!53;CL:0000051!7.46e-31!53;CL:0000838!1.55e-30!52;CL:0000860!5.46e-17!45;CL:0002057!1.19e-16!42;CL:0000945!9.37e-15!24;CL:0000826!9.37e-15!24;CL:0000084!1.55e-14!25;CL:0000827!1.55e-14!25;CL:0000766!1.96e-14!76;CL:0000791!2.30e-14!18;CL:0000789!2.30e-14!18;CL:0002420!2.30e-14!18;CL:0002419!2.30e-14!18;CL:0000790!2.30e-14!18;CL:0000557!7.64e-14!71;CL:0000763!8.72e-14!112;CL:0000049!8.72e-14!112;CL:0002009!1.86e-13!65;CL:0002194!3.82e-13!63;CL:0000576!3.82e-13!63;CL:0000040!3.82e-13!63;CL:0000559!3.82e-13!63;CL:0000839!1.41e-12!70;CL:0000236!2.25e-09!14;CL:0000625!2.62e-09!11 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.45e-27;53!CL:0000791;1.02e-24;18!CL:0000789;1.02e-24;18!CL:0002419;1.02e-24;18!CL:0000084;4.35e-22;25!CL:0000945;6.84e-22;24!CL:0002087;8.92e-18;104!CL:0000625;1.74e-15;11!CL:0000236;2.05e-15;13!CL:0000624;3.78e-10;6!CL:0000738;9.35e-10;136!CL:0000860;1.23e-09;33!CL:0002057;1.23e-09;33!CL:0000576;2.04e-09;48!CL:0000988;7.00e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,9.68e-54,115;CL:0000838,8.52e-48,52;CL:0000738,2.14e-47,136;CL:0000542,1.43e-46,53;CL:0000051,1.43e-46,53;CL:0002031,1.33e-45,120;CL:0000037,5.55e-40,168;CL:0000988,1.05e-38,177;CL:0002032,9.25e-37,161;CL:0000837,9.25e-37,161;CL:0000791,1.00e-24,18;CL:0000789,1.00e-24,18;CL:0002420,1.00e-24,18;CL:0002419,1.00e-24,18;CL:0000790,1.00e-24,18;CL:0000945,1.57e-22,24;CL:0000826,1.57e-22,24;CL:0000084,7.53e-22,25;CL:0000827,7.53e-22,25;CL:0000625,1.44e-15,11;CL:0000860,7.49e-15,42;CL:0002057,7.49e-15,42;CL:0000236,2.26e-14,14;CL:0000473,5.30e-12,48;CL:0000234,5.30e-12,48;CL:0002194,1.22e-10,59;CL:0000576,1.22e-10,59;CL:0000040,1.22e-10,59;CL:0000559,1.22e-10,59;CL:0000624,4.11e-10,6;CL:0002009,4.94e-10,61;CL:0000766,7.28e-10,72;CL:0000557,2.31e-09,67;CL:0000839,1.09e-08,66 | |||
|ontology_enrichment_development_v019=CL:0000051;1.45e-27;53!CL:0000790;1.02e-24;18!CL:0002057;3.13e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.88e-21!112;UBERON:0002390!2.32e-21!102;UBERON:0003061!2.32e-21!102;UBERON:0002371!1.36e-11!80;UBERON:0001474!5.47e-11!86;UBERON:0002405!1.70e-10!115;UBERON:0000178!1.11e-09!15;UBERON:0000179!1.11e-09!15;UBERON:0000463!1.11e-09!15;UBERON:0004765!3.46e-07!101;UBERON:0001434!3.46e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.12e-14;15!UBERON:0000179;2.12e-14;15!UBERON:0000463;2.12e-14;15!UBERON:0002390;1.61e-11;32!UBERON:0002193;6.48e-08;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.03e-21,98;UBERON:0003061,3.03e-21,98;UBERON:0002193,6.62e-21,108;UBERON:0000178,9.86e-15,15;UBERON:0000179,9.86e-15,15;UBERON:0000463,9.86e-15,15;UBERON:0002405,9.04e-12,93;UBERON:0002371,8.77e-09,76;UBERON:0001474,2.81e-08,82;UBERON:0004765,8.10e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.67446920117829,2.62721886239826,1.49550484495991,0.786728553697808,4.60595277716655,1.85779347979291,0,0.6024118375565,0.369754010166788,2.16908161624845,1.56386155736164,1.46800219667424,3.32397245119126,3.00816671205213,3.90619567288533,0.447830948479849,1.94336199611388,1.03030227053675,1.01778767145695,0,1.94067248950253,0.232429036905685,1.23350366406548,2.16794459626573,0.28769239232215,1.0246428261164,0.709446689665756,0.344745680736619,0.645484683583826,4.06279459783025,0.376484679085209,0.272906150057846,1.12361742222542,2.44867113896722,0.962787081228281,1.27867425159808,1.31940520074686,1.59570926097305,0.852449501065388,0.870627715885752,2.26954089876456,1.86846674698672,1.50749199154046,1.0429658368404,0.65156653411535,4.23779651843358,1.10483290796269,1.26584954976354,1.47878700418359,1.06302149982522,0.838634582033504,1.34794357375794,1.50176892841506,2.57160938715328,1.42506371870624,0.79566670879636,1.46131323011707,5.27988733383968,3.82297027883492,1.77901850772711,2.13365111283254,2.80277190925209,1.72425731986345,1.98313461835459,3.81621501814146,5.69212969109448,3.52342313622563,7.64546456250458,2.64342657158052,1.68152568894461,0.263384084775077,6.29471264364266,6.6811829667358,6.16804496998528,3.8452893939856,3.2592226663359,2.36723902867367,3.89653456815823,4.2335973616366,6.48132996444642,5.09527957542329,5.95768500283034,4.22701355094728,4.68213651215562,3.4531959966772,3.31620021343018,3.76744011455568,3.26230438956533,3.21048993707656,3.1360657141493,3.96582699441482,8.04763036564035,3.77990190030893,2.78321661221453,2.54852331459277,3.25541726928209,3.8018081777935,4.66782869141096,4.8634912238679,3.74792179657038,2.8413270245282,2.46338399076314,5.84659555351724,7.2208852861547,6.51709817472595,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,0.327447688744282,0.728590576585084,0,0.324547393654683,0.174129737299267,0,1.90792499444274,0,1.11437250398869,0,0,1.04142150482278,1.13061588384802,0,0,0,0.516833518338658,1.42306505074684,0.66944122552934,0.402829317109147,0,0,0.367663080345869,0,0.267899184852239,0,0.225222960966644,0,0,0.366403487860815,0,3.87780264148325,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0.243947412259191,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0.237270619111097,0.134831308160164,0,0,0.738155454624648,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0.0925884451585296,0,0,0,0.463721619900307,0.117408694235822,0,0,0.380508304469197,0,0,0.246217006087397,0,0,0,0,0.283550194484773,0,0,0,0,0.088048434013226,0.621984346622316,0.288239906833923,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,1.2329365839288,5.12279976525011,6.253199670926,4.2353201972317,0,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0.749007023947182,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48121631347465,1.72571360654893,2.881644060693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460404944679482,0,0,0,0.451199612907412,0.385076685522074,0,1.46139224653261,0.422206515571503,1.13733384070897,0.170093705276516,0,0,0,0,0.254876273045038,0.831076008928724,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0.206082023295445,0,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.165284915360978,0,0.638063562472921,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.376575203107117,0,0,0,0,3.04468565539302,3.0585488285695,2.84823593587081,2.62054953003568,1.64544909234478,2.59389324477087,1.62009431171434,3.17250070517708,0.106824071127473,0,0.490080431962063,0.929015875628594,1.15415370381156,0.497992903438899,0.478278818186467,0,0.957526850661834,1.05836791361941,0.324621940274555,0.561594356226918,0.912938716132769,0.94007937463814,0,1.01575066680962,0.321176150207399,0.403599414382095,1.70338495076131,1.03051603426729,0,0,0.333698283423817,0.390776190804081,0.278406173895242,0,0,0,0,0.935702702041099,0.293016358543788,0.121360521749513,2.11742430127209,0,0,0,0,0,0.281338832821026,0,0.16480387422676,0,0.398495976502139,2.48655523978033,2.51932747854276,0,1.84627208191604,0,0.629078458031288,0.716084698702437,0.511572370226872,0.394573622547734,4.7896618469388,0,0.969332746095218,0,0,0,0.349839999984783,0,1.0241410345695,1.5255219017566,0,0.344743373241465,0,0,4.42870692906919,2.17073589525734,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,0.46112780877612,0.448788222048861,0,0,0,0,0,0,0,0.225595660617181,0,0.335643173951685,0,0.317873157960757,0,0.326465616318295,0,0,0.995261931078505,0.265372693510018,0,1.18608451472249,0.494255755786011,1.46190729307638,0,0.802577647298789,0.702793337176017,1.094728735294,0,0,1.57833761139756,1.20990716048664,0,0.695052375913368,0.150323419414493,0.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| ||
|short_description=p3@CCDC88C | |||
}} | }} |
Latest revision as of 13:30, 16 September 2015
Short description: | p3@CCDC88C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC88C_5end |
Coexpression cluster: | C57_Neutrophils_Eosinophils_Whole_CD4_CD8_CD19_Natural |
Association with transcript: | -228bp_to_ENST00000389856_5end |
EntrezGene: | CCDC88C |
HGNC: | 19967 |
UniProt: | Q0P665 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.03e-21 | 98 |
blood island | 3.03e-21 | 98 |
hemolymphoid system | 6.62e-21 | 108 |
blood | 9.86e-15 | 15 |
haemolymphatic fluid | 9.86e-15 | 15 |
organism substance | 9.86e-15 | 15 |
immune system | 9.04e-12 | 93 |
bone marrow | 8.77e-09 | 76 |
bone element | 2.81e-08 | 82 |
skeletal element | 8.10e-07 | 90 |