FFCP PHASE1:Hg19::chr14:81687728..81687740,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:81687728..81687740,- to FFCP PHASE1:Hg19::chr14:81687728..81687740,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2957 | |EntrezGene=2957 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4646 | |HGNC=4646 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-7bp_to_ENST00000556268,uc001xvh.1_5end | |||
|cluster_id=chr14:81687728..81687740,- | |||
|description=CAGE_peak_9_at_GTF2A1_5end | |||
|id=chr14:81687728..81687740,- | |||
|ontology_enrichment_celltype=CL:0000860!2.34e-15!45;CL:0002057!3.91e-15!42;CL:0000766!3.39e-13!76;CL:0002194!5.84e-13!63;CL:0000576!5.84e-13!63;CL:0000040!5.84e-13!63;CL:0000559!5.84e-13!63;CL:0002009!7.81e-13!65;CL:0000738!2.82e-12!140;CL:0000839!4.52e-12!70;CL:0002087!9.59e-12!119;CL:0000557!6.23e-11!71;CL:0002031!1.42e-10!124;CL:0000037!1.70e-09!172;CL:0000566!1.70e-09!172;CL:0002032!8.96e-09!165;CL:0000837!8.96e-09!165;CL:0000988!1.23e-08!182;CL:0000763!1.79e-08!112;CL:0000049!1.79e-08!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.75e-27;33!CL:0002057;7.75e-27;33!CL:0000576;1.89e-19;48!CL:0000473;2.15e-18;39!CL:0000234;2.15e-18;39!CL:0000766;1.08e-12;69!CL:0000771;6.26e-09;2!CL:0002561;7.61e-09;2!CL:0002559;1.73e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.61e-32,42;CL:0002057,6.61e-32,42;CL:0000473,2.83e-27,48;CL:0000234,2.83e-27,48;CL:0000766,1.26e-26,72;CL:0002194,1.99e-25,59;CL:0000576,1.99e-25,59;CL:0000040,1.99e-25,59;CL:0000559,1.99e-25,59;CL:0002009,1.99e-24,61;CL:0000839,3.46e-22,66;CL:0000557,8.87e-22,67;CL:0000763,9.25e-16,108;CL:0000049,9.25e-16,108;CL:0000738,8.72e-14,136;CL:0002087,8.84e-12,115;CL:0002031,4.56e-11,120;CL:0000988,4.76e-10,177;CL:0000037,5.86e-10,168;CL:0002032,1.27e-09,161;CL:0000837,1.27e-09,161;CL:0000771,5.21e-09,2;CL:0002561,6.09e-09,2;CL:0002559,1.09e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.10e-11!102;UBERON:0003061!2.10e-11!102;UBERON:0001474!3.53e-10!86;UBERON:0002371!7.88e-10!80;UBERON:0004765!1.98e-09!101;UBERON:0001434!1.98e-09!101;UBERON:0002193!2.12e-08!112;UBERON:0002204!6.92e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;7.61e-09;2!UBERON:0005942;7.61e-09;2!UBERON:0005932;7.61e-09;2!UBERON:0002073;1.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.38e-18,76;UBERON:0001474,1.52e-18,82;UBERON:0004765,3.61e-18,90;UBERON:0002390,3.51e-16,98;UBERON:0003061,3.51e-16,98;UBERON:0001434,8.79e-16,100;UBERON:0002405,3.05e-14,93;UBERON:0002193,3.70e-14,108;UBERON:0002204,5.92e-11,167;UBERON:0005933,6.09e-09,2;UBERON:0005942,6.09e-09,2;UBERON:0005932,6.09e-09,2;UBERON:0003081,9.99e-09,203;UBERON:0002073,1.09e-07,5;UBERON:0005086,1.09e-07,5 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,2.01697543935533,1.20538905604795,1.46062018077475,0.487932798790507,0.246242116153576,0.204000691244253,0,0.286235987131057,0.136874425072884,0.251085279189606,0.152826811495903,0.246301768349837,0.314843125254717,0.786728553697808,0,0.464448369948228,0,0.30120591877825,0,0.0774672005803016,0.142169232487422,0.880801318004542,1.66198622559563,0.200544447470142,0.868043482863407,0.671746422719773,0.647787332037959,0,1.30858414901608,0,0,0.697287110717054,0.411167888021826,1.54853185447552,0.575384784644301,0.768482119587302,1.18241114944293,2.41321976515633,1.93645405075148,0,0.564727018627814,1.09162460023138,0.898893937780338,2.44867113896722,2.24650318953266,0,1.31940520074686,0.598390972864896,1.27867425159808,2.03146467040009,2.26954089876456,0.622822248995575,0.502497330513487,0.521482918420201,2.6062661364614,1.21079900526674,1.47311054395026,1.58231193720442,0,0.637812899895131,0.838634582033504,0.112328631146495,0.300353785683013,1.12507910687956,1.14005097496499,1.19350006319454,0.182664153764634,0,0,0.889509253863555,1.70692089026603,0.400395987036012,0.574752439954483,0,0,0.569212969109448,0,0,0,1.12101712596307,0,0.590129310341499,0.393010762749165,0,0.167186495390678,0.977766799900771,0,1.94826728407911,0.334231370655521,0.294605907474837,0.664601683750863,0.541607727530031,0.512365278902701,0.260118695119756,0.164437904603676,0.552700035571697,0,0.741432815810302,0,0,0.226618685395132,0.766440987203842,0,1.01207876807801,0.637130828648193,0,0,0.752875595388864,0.511946444617674,0,0,0,0.403213486449465,0.267440195783507,0.579297615531196,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0,0,0.973269740605272,0.283604451492204,0,0.175669571386252,0.654895377488563,0,0,0.649094787309367,0.174129737299267,0,1.19245312152671,0,2.22874500797739,0.39752481473341,0,0,0.56530794192401,0,0,0.208994966536811,0,0,0,0,0,0.488124115096339,0,0.81014194788176,0,0,0,4.5994991239765,0,0.549605231791222,1.31780417436063,3.87780264148325,0,0,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0.312160076830321,0,0,0.117434498643765,0,0.140450806702248,0.204154171254893,0.245668634623536,0.619954687054593,0,0.247266929278557,0,0,0,0.125118519871964,0.277064115484183,0,0,0.300476117813194,0,1.07633781413317,0.213557388818567,0.211931901159562,0.300091096084402,0.721367704669072,1.03056216018252,0.930584281657949,0.168776332241266,0.292311015483596,0,0.0920498986422993,0,1.06502877754984,0.403008392910561,0.508681776931463,0.193260853163297,0,0,0.243947412259191,0.265059536642971,0,0.10366105501537,0,0,1.56449532329816,0,0,1.39310378409594,2.16563844500876,0,0.168584690078102,0.241011029883482,0.330881918197182,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.343135620597051,0.439001141634502,1.1240175325762,0.402115889646523,0.185176890317059,0,0,0,0.115930404975077,0.234817388471643,0,0,0,0.790204397959275,0,0.246217006087397,0,0,1.87467667973554,0,0,0.179117045405697,0,0,0,0.088048434013226,0,0,0.37872730027914,0,0,1.17217447210047,0,0,0,0,0.112131084345361,0,0.4400297149257,0.387815147273333,0,0,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0.799783929456456,0,0,0,0,0,1.42636905040718,0.434343920002738,0.61642896765115,0.179060963239896,0,0.788123040807709,0.646882724578552,0.898401253958239,0.508189248444927,0,0,0.167516265334349,0,0.749007023947182,0,1.24324654030811,0.24538298343828,0,0.271265023699736,0.207970861530807,0.713715955188647,0.157702415033935,0.468565659970853,0.601892199455438,0,0,0,0.737476674166813,0.347534457872331,0,0,0.413536052245775,0.431428401637234,0.320182673410333,0.303127571446259,0,0,0.248107807818777,0.306923946576125,0,0.384417447767103,0,0.321707842287215,1.48418066444991,0,0.355123450626254,0.0821271560138091,1.03850885836724,0.116210378459959,0,0.200506470303285,0.276242966807689,0,0.364182336013434,0,0,0.231046011313244,0,0,0.105551628892876,0,0.340187410553031,0.215915916102139,0,0.270946437543853,0,0,0,0.223874754722178,0.438519753291869,0.522870902049801,0,0,0.650756789328606,0.103041011647722,1.00726411300178,0.82509499920588,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0.0852266274161009,0.267096106940212,0,0.192190067365106,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0.869932992075073,0.18532421910392,0.143124886741991,0.372158369359667,0,0,0.511795582622668,0,0.318203247925937,0.78494864019923,0,0,0,0,0,0,0.48763373908959,0.487426979262569,0,0.136499911407986,0.282810863907425,0,0,0,0.438450885253763,0,0,0.608731130888112,0.6196469961995,0.281695602532241,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0,0,1.08890984861323,0,0,0,0,0,0.507447609232169,0,1.13929437434833,0.476463550915578,0,0.648473311192717,0.540031437238115,0,0.32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| ||
|short_description=p9@GTF2A1 | |||
}} | }} |
Latest revision as of 08:25, 16 September 2015
Short description: | p9@GTF2A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GTF2A1_5end |
Coexpression cluster: | NA |
Association with transcript: | -7bp_to_ENST00000556268, uc001xvh.1_5end |
EntrezGene: | GTF2A1 |
HGNC: | 4646 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.61e-32 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.61e-32 | 42 |
defensive cell | 2.83e-27 | 48 |
phagocyte | 2.83e-27 | 48 |
myeloid leukocyte | 1.26e-26 | 72 |
monopoietic cell | 1.99e-25 | 59 |
monocyte | 1.99e-25 | 59 |
monoblast | 1.99e-25 | 59 |
promonocyte | 1.99e-25 | 59 |
macrophage dendritic cell progenitor | 1.99e-24 | 61 |
myeloid lineage restricted progenitor cell | 3.46e-22 | 66 |
granulocyte monocyte progenitor cell | 8.87e-22 | 67 |
myeloid cell | 9.25e-16 | 108 |
common myeloid progenitor | 9.25e-16 | 108 |
leukocyte | 8.72e-14 | 136 |
nongranular leukocyte | 8.84e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 4.56e-11 | 120 |
hematopoietic cell | 4.76e-10 | 177 |
hematopoietic stem cell | 5.86e-10 | 168 |
hematopoietic oligopotent progenitor cell | 1.27e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.27e-09 | 161 |
eosinophil | 5.21e-09 | 2 |
outer root sheath cell | 6.09e-09 | 2 |
hair follicle cell | 1.09e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.38e-18 | 76 |
bone element | 1.52e-18 | 82 |
skeletal element | 3.61e-18 | 90 |
hematopoietic system | 3.51e-16 | 98 |
blood island | 3.51e-16 | 98 |
skeletal system | 8.79e-16 | 100 |
immune system | 3.05e-14 | 93 |
hemolymphoid system | 3.70e-14 | 108 |
musculoskeletal system | 5.92e-11 | 167 |
hair root sheath | 6.09e-09 | 2 |
hair outer root sheath | 6.09e-09 | 2 |
bulb of hair follicle | 6.09e-09 | 2 |
lateral plate mesoderm | 9.99e-09 | 203 |
hair follicle | 1.09e-07 | 5 |
hair follicle placode | 1.09e-07 | 5 |