FFCP PHASE1:Hg19::chr14:70235889..70236017,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:70235889..70236017,+ to FFCP PHASE1:Hg19::chr14:70235889..70236017,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6430 | |EntrezGene=6430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |HGNC=10787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-445bp_to_ENST00000556330_5end | |||
|cluster_id=chr14:70235889..70236017,+ | |||
|description=CAGE_peak_6_at_SRSF5_5end | |||
|id=chr14:70235889..70236017,+ | |||
|ontology_enrichment_celltype=CL:0000037!4.47e-20!172;CL:0000566!4.47e-20!172;CL:0002032!4.06e-19!165;CL:0000837!4.06e-19!165;CL:0000738!1.10e-18!140;CL:0000988!1.09e-17!182;CL:0002087!6.20e-16!119;CL:0002031!8.51e-15!124;CL:0000860!5.74e-14!45;CL:0002057!7.54e-14!42;CL:0000763!5.12e-13!112;CL:0000049!5.12e-13!112;CL:0000766!1.37e-12!76;CL:0000839!1.22e-09!70;CL:0002194!1.43e-09!63;CL:0000576!1.43e-09!63;CL:0000040!1.43e-09!63;CL:0000559!1.43e-09!63;CL:0002009!1.67e-09!65;CL:0000557!5.25e-09!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.04e-14;33!CL:0002057;6.04e-14;33!CL:0000473;3.34e-09;39!CL:0000234;3.34e-09;39!CL:0000576;2.11e-08;48!CL:0000766;6.15e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.64e-18,168;CL:0000738,5.61e-18,136;CL:0002032,1.64e-17,161;CL:0000837,1.64e-17,161;CL:0000988,2.71e-17,177;CL:0002087,4.64e-15,115;CL:0000860,5.69e-15,42;CL:0002057,5.69e-15,42;CL:0002031,6.53e-14,120;CL:0000766,2.88e-12,72;CL:0000473,3.66e-12,48;CL:0000234,3.66e-12,48;CL:0000763,7.84e-12,108;CL:0000049,7.84e-12,108;CL:0000839,4.75e-09,66;CL:0002009,4.93e-09,61;CL:0002194,5.32e-09,59;CL:0000576,5.32e-09,59;CL:0000040,5.32e-09,59;CL:0000559,5.32e-09,59;CL:0000557,1.11e-08,67 | |||
|ontology_enrichment_development_v019=CL:0002057;1.49e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.65e-12!57;UBERON:0005068!1.65e-12!57;UBERON:0006241!1.65e-12!57;UBERON:0007135!1.65e-12!57;UBERON:0002780!3.27e-11!41;UBERON:0001890!3.27e-11!41;UBERON:0006240!3.27e-11!41;UBERON:0003080!2.34e-10!42;UBERON:0002020!1.60e-09!34;UBERON:0003528!1.60e-09!34;UBERON:0002616!6.48e-09!59;UBERON:0002346!2.13e-08!90;UBERON:0002791!2.55e-08!33;UBERON:0007023!7.04e-08!115;UBERON:0001893!8.11e-08!34;UBERON:0003075!1.42e-07!86;UBERON:0007284!1.42e-07!86;UBERON:0001017!1.66e-07!82;UBERON:0001869!1.80e-07!32;UBERON:0002390!3.64e-07!102;UBERON:0003061!3.64e-07!102;UBERON:0000955!8.06e-07!69;UBERON:0006238!8.06e-07!69;UBERON:0002371!8.24e-07!80;UBERON:0005743!8.83e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.11e-08;41!UBERON:0001890;3.11e-08;41!UBERON:0003528;9.95e-08;34!UBERON:0002020;9.95e-08;34!UBERON:0002791;1.26e-07;32!UBERON:0000073;4.84e-07;53!UBERON:0002616;4.84e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.89e-13,56;UBERON:0005068,3.89e-13,56;UBERON:0006241,3.89e-13,56;UBERON:0007135,3.89e-13,56;UBERON:0000073,9.65e-12,53;UBERON:0002616,9.65e-12,53;UBERON:0002780,6.56e-11,41;UBERON:0001890,6.56e-11,41;UBERON:0003080,6.56e-11,41;UBERON:0006240,6.56e-11,41;UBERON:0002346,2.54e-10,86;UBERON:0003528,2.05e-09,34;UBERON:0002020,2.05e-09,34;UBERON:0003075,2.49e-09,82;UBERON:0007284,2.49e-09,82;UBERON:0002791,2.57e-08,32;UBERON:0001017,1.92e-07,81;UBERON:0001893,3.13e-07,34;UBERON:0001869,3.52e-07,32;UBERON:0002390,5.73e-07,98;UBERON:0003061,5.73e-07,98;UBERON:0002371,6.27e-07,76;UBERON:0000955,6.43e-07,68;UBERON:0006238,6.43e-07,68 | |||
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| ||
|short_description=p6@SRSF5 | |||
}} | }} |
Latest revision as of 19:38, 15 September 2015
Short description: | p6@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SRSF5_5end |
Coexpression cluster: | NA |
Association with transcript: | -445bp_to_ENST00000556330_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.64e-18 | 168 |
leukocyte | 5.61e-18 | 136 |
hematopoietic oligopotent progenitor cell | 1.64e-17 | 161 |
hematopoietic multipotent progenitor cell | 1.64e-17 | 161 |
hematopoietic cell | 2.71e-17 | 177 |
nongranular leukocyte | 4.64e-15 | 115 |
classical monocyte | 5.69e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.69e-15 | 42 |
hematopoietic lineage restricted progenitor cell | 6.53e-14 | 120 |
myeloid leukocyte | 2.88e-12 | 72 |
defensive cell | 3.66e-12 | 48 |
phagocyte | 3.66e-12 | 48 |
myeloid cell | 7.84e-12 | 108 |
common myeloid progenitor | 7.84e-12 | 108 |
myeloid lineage restricted progenitor cell | 4.75e-09 | 66 |
macrophage dendritic cell progenitor | 4.93e-09 | 61 |
monopoietic cell | 5.32e-09 | 59 |
monocyte | 5.32e-09 | 59 |
monoblast | 5.32e-09 | 59 |
promonocyte | 5.32e-09 | 59 |
granulocyte monocyte progenitor cell | 1.11e-08 | 67 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.89e-13 | 56 |
neural rod | 3.89e-13 | 56 |
future spinal cord | 3.89e-13 | 56 |
neural keel | 3.89e-13 | 56 |
regional part of nervous system | 9.65e-12 | 53 |
regional part of brain | 9.65e-12 | 53 |
regional part of forebrain | 6.56e-11 | 41 |
forebrain | 6.56e-11 | 41 |
anterior neural tube | 6.56e-11 | 41 |
future forebrain | 6.56e-11 | 41 |
neurectoderm | 2.54e-10 | 86 |
brain grey matter | 2.05e-09 | 34 |
gray matter | 2.05e-09 | 34 |
neural plate | 2.49e-09 | 82 |
presumptive neural plate | 2.49e-09 | 82 |
regional part of telencephalon | 2.57e-08 | 32 |
central nervous system | 1.92e-07 | 81 |
telencephalon | 3.13e-07 | 34 |
cerebral hemisphere | 3.52e-07 | 32 |
hematopoietic system | 5.73e-07 | 98 |
blood island | 5.73e-07 | 98 |
bone marrow | 6.27e-07 | 76 |
brain | 6.43e-07 | 68 |
future brain | 6.43e-07 | 68 |