FFCP PHASE1:Hg19::chr14:70233907..70233918,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:70233907..70233918,+ to FFCP PHASE1:Hg19::chr14:70233907..70233918,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6430 | |EntrezGene=6430 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10787 | |HGNC=10787 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=4bp_to_ENST00000555547_5end | |||
|cluster_id=chr14:70233907..70233918,+ | |||
|coexpression_cluster_id=C213 | |||
|description=CAGE_peak_2_at_SRSF5_5end | |||
|id=chr14:70233907..70233918,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.80e-30!140;CL:0000037!1.83e-25!172;CL:0000566!1.83e-25!172;CL:0002057!8.98e-24!42;CL:0000988!3.02e-23!182;CL:0002031!8.70e-23!124;CL:0000860!1.40e-22!45;CL:0002032!3.12e-22!165;CL:0000837!3.12e-22!165;CL:0002087!2.43e-21!119;CL:0000766!7.68e-18!76;CL:0000557!3.71e-15!71;CL:0000763!1.33e-13!112;CL:0000049!1.33e-13!112;CL:0000839!2.12e-13!70;CL:0002009!9.35e-13!65;CL:0002194!9.29e-12!63;CL:0000576!9.29e-12!63;CL:0000040!9.29e-12!63;CL:0000559!9.29e-12!63;CL:0000838!1.02e-08!52;CL:0000542!1.37e-08!53;CL:0000051!1.37e-08!53;CL:0002393!6.95e-07!9;CL:0002397!6.95e-07!9;CL:0000084!7.54e-07!25;CL:0000827!7.54e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.50e-17;33!CL:0002057;3.50e-17;33!CL:0000576;8.18e-12;48!CL:0000473;2.94e-10;39!CL:0000234;2.94e-10;39!CL:0000766;7.83e-10;69!CL:0002087;2.25e-08;104!CL:0000738;3.93e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.72e-31,136;CL:0000037,1.60e-25,168;CL:0000860,5.15e-24,42;CL:0002057,5.15e-24,42;CL:0000988,1.11e-23,177;CL:0002031,4.94e-23,120;CL:0002032,2.97e-22,161;CL:0000837,2.97e-22,161;CL:0002087,1.43e-21,115;CL:0000473,2.77e-18,48;CL:0000234,2.77e-18,48;CL:0000766,4.59e-18,72;CL:0000557,2.58e-15,67;CL:0000839,1.69e-13,66;CL:0000763,1.77e-13,108;CL:0000049,1.77e-13,108;CL:0002009,7.38e-13,61;CL:0002194,7.81e-12,59;CL:0000576,7.81e-12,59;CL:0000040,7.81e-12,59;CL:0000559,7.81e-12,59;CL:0000838,6.81e-09,52;CL:0000542,9.16e-09,53;CL:0000051,9.16e-09,53;CL:0002393,6.08e-07,9;CL:0002397,6.08e-07,9;CL:0000084,6.60e-07,25;CL:0000827,6.60e-07,25 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-17;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!5.78e-13!80;UBERON:0001474!1.76e-12!86;UBERON:0002390!2.28e-11!102;UBERON:0003061!2.28e-11!102;UBERON:0004765!8.77e-10!101;UBERON:0001434!8.77e-10!101;UBERON:0002193!2.11e-09!112;UBERON:0002405!9.44e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.63e-13,76;UBERON:0001474,1.11e-12,82;UBERON:0004765,1.18e-11,90;UBERON:0002390,1.76e-11,98;UBERON:0003061,1.76e-11,98;UBERON:0002405,4.81e-10,93;UBERON:0002193,1.36e-09,108;UBERON:0001434,7.33e-09,100 | |||
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| ||
|short_description=p2@SRSF5 | |||
}} | }} |
Latest revision as of 19:30, 15 September 2015
Short description: | p2@SRSF5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SRSF5_5end |
Coexpression cluster: | C213_CD14_Natural_CD8_CD4_Basophils_Eosinophils_Peripheral |
Association with transcript: | 4bp_to_ENST00000555547_5end |
EntrezGene: | SRSF5 |
HGNC: | 10787 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 7.72e-31 | 136 |
hematopoietic stem cell | 1.60e-25 | 168 |
classical monocyte | 5.15e-24 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.15e-24 | 42 |
hematopoietic cell | 1.11e-23 | 177 |
hematopoietic lineage restricted progenitor cell | 4.94e-23 | 120 |
hematopoietic oligopotent progenitor cell | 2.97e-22 | 161 |
hematopoietic multipotent progenitor cell | 2.97e-22 | 161 |
nongranular leukocyte | 1.43e-21 | 115 |
defensive cell | 2.77e-18 | 48 |
phagocyte | 2.77e-18 | 48 |
myeloid leukocyte | 4.59e-18 | 72 |
granulocyte monocyte progenitor cell | 2.58e-15 | 67 |
myeloid lineage restricted progenitor cell | 1.69e-13 | 66 |
myeloid cell | 1.77e-13 | 108 |
common myeloid progenitor | 1.77e-13 | 108 |
macrophage dendritic cell progenitor | 7.38e-13 | 61 |
monopoietic cell | 7.81e-12 | 59 |
monocyte | 7.81e-12 | 59 |
monoblast | 7.81e-12 | 59 |
promonocyte | 7.81e-12 | 59 |
lymphoid lineage restricted progenitor cell | 6.81e-09 | 52 |
lymphocyte | 9.16e-09 | 53 |
common lymphoid progenitor | 9.16e-09 | 53 |
intermediate monocyte | 6.08e-07 | 9 |
CD14-positive, CD16-positive monocyte | 6.08e-07 | 9 |
T cell | 6.60e-07 | 25 |
pro-T cell | 6.60e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.63e-13 | 76 |
bone element | 1.11e-12 | 82 |
skeletal element | 1.18e-11 | 90 |
hematopoietic system | 1.76e-11 | 98 |
blood island | 1.76e-11 | 98 |
immune system | 4.81e-10 | 93 |
hemolymphoid system | 1.36e-09 | 108 |
skeletal system | 7.33e-09 | 100 |