FFCP PHASE1:Hg19::chr14:62203749..62203798,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:62203749..62203798,+ to FFCP PHASE1:Hg19::chr14:62203749..62203798,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3091 | |EntrezGene=3091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |HGNC=4910 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=141bp_to_ENST00000555014_5end | |||
|cluster_id=chr14:62203749..62203798,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_5_at_HIF1A_5end | |||
|id=chr14:62203749..62203798,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.29e-16!42;CL:0000860!2.60e-15!45;CL:0000766!1.12e-14!76;CL:0000048!7.67e-13!430;CL:0000723!3.99e-12!436;CL:0002194!7.14e-12!63;CL:0000576!7.14e-12!63;CL:0000040!7.14e-12!63;CL:0000559!7.14e-12!63;CL:0000839!1.57e-11!70;CL:0000034!1.62e-11!444;CL:0000557!6.77e-11!71;CL:0002009!7.75e-11!65;CL:0002320!3.77e-10!365;CL:0000134!7.35e-10!358;CL:0000548!1.07e-09!679;CL:0000004!1.07e-09!679;CL:0000255!1.07e-09!679;CL:0000012!1.35e-09!682;CL:0002371!1.71e-07!591;CL:0000144!2.28e-07!625;CL:0000063!2.49e-07!578;CL:0000219!6.01e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.72e-18;33!CL:0002057;1.72e-18;33!CL:0000473;1.92e-14;39!CL:0000234;1.92e-14;39!CL:0000576;7.34e-10;48!CL:0000766;1.40e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.09e-21,427;CL:0000723,4.30e-20,433;CL:0000034,3.82e-19,441;CL:0000860,3.54e-18,42;CL:0002057,3.54e-18,42;CL:0000473,1.37e-17,48;CL:0000234,1.37e-17,48;CL:0002320,2.49e-16,361;CL:0000134,3.43e-16,354;CL:0000766,1.99e-15,72;CL:0002194,1.16e-12,59;CL:0000576,1.16e-12,59;CL:0000040,1.16e-12,59;CL:0000559,1.16e-12,59;CL:0000839,1.44e-12,66;CL:0000557,3.71e-12,67;CL:0002009,8.68e-12,61;CL:0000219,4.07e-11,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.19e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;5.08e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.70e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.00e-10!375;UBERON:0002371!1.44e-09!80;UBERON:0002204!6.03e-09!167;UBERON:0001474!2.18e-08!86;UBERON:0004765!3.53e-08!101;UBERON:0001434!3.53e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.16e-16,371;UBERON:0002204,5.02e-12,167;UBERON:0002371,1.54e-11,76;UBERON:0000926,4.27e-11,315;UBERON:0004120,4.27e-11,315;UBERON:0006603,4.27e-11,315;UBERON:0001474,3.28e-10,82;UBERON:0001434,5.47e-10,100;UBERON:0004765,1.29e-09,90;UBERON:0002405,3.50e-08,93;UBERON:0002390,5.46e-07,98;UBERON:0003061,5.46e-07,98 | |||
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| ||
|short_description=p5@HIF1A | |||
}} | }} |
Latest revision as of 23:32, 24 September 2015
Short description: | p5@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_HIF1A_5end |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | 141bp_to_ENST00000555014_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.09e-21 | 427 |
somatic stem cell | 4.30e-20 | 433 |
stem cell | 3.82e-19 | 441 |
classical monocyte | 3.54e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.54e-18 | 42 |
defensive cell | 1.37e-17 | 48 |
phagocyte | 1.37e-17 | 48 |
connective tissue cell | 2.49e-16 | 361 |
mesenchymal cell | 3.43e-16 | 354 |
myeloid leukocyte | 1.99e-15 | 72 |
monopoietic cell | 1.16e-12 | 59 |
monocyte | 1.16e-12 | 59 |
monoblast | 1.16e-12 | 59 |
promonocyte | 1.16e-12 | 59 |
myeloid lineage restricted progenitor cell | 1.44e-12 | 66 |
granulocyte monocyte progenitor cell | 3.71e-12 | 67 |
macrophage dendritic cell progenitor | 8.68e-12 | 61 |
motile cell | 4.07e-11 | 386 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.16e-16 | 371 |
musculoskeletal system | 5.02e-12 | 167 |
bone marrow | 1.54e-11 | 76 |
mesoderm | 4.27e-11 | 315 |
mesoderm-derived structure | 4.27e-11 | 315 |
presumptive mesoderm | 4.27e-11 | 315 |
bone element | 3.28e-10 | 82 |
skeletal system | 5.47e-10 | 100 |
skeletal element | 1.29e-09 | 90 |
immune system | 3.50e-08 | 93 |
hematopoietic system | 5.46e-07 | 98 |
blood island | 5.46e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.70e-07 | 14 |