FFCP PHASE1:Hg19::chr14:62203595..62203676,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:62203595..62203676,+ to FFCP PHASE1:Hg19::chr14:62203595..62203676,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3091 | |EntrezGene=3091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |HGNC=4910 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000555014_5end | |||
|cluster_id=chr14:62203595..62203676,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_4_at_HIF1A_5end | |||
|id=chr14:62203595..62203676,+ | |||
|ontology_enrichment_celltype=CL:0000723!1.49e-14!436;CL:0000048!1.61e-14!430;CL:0000860!2.18e-14!45;CL:0002057!2.45e-14!42;CL:0000034!8.28e-14!444;CL:0000548!3.86e-13!679;CL:0000004!3.86e-13!679;CL:0000255!3.86e-13!679;CL:0000012!2.55e-12!682;CL:0000766!2.17e-11!76;CL:0002371!1.14e-10!591;CL:0000144!2.12e-10!625;CL:0002194!1.87e-09!63;CL:0000576!1.87e-09!63;CL:0000040!1.87e-09!63;CL:0000559!1.87e-09!63;CL:0002320!3.26e-09!365;CL:0000134!1.03e-08!358;CL:0002009!1.05e-08!65;CL:0000003!1.44e-08!722;CL:0000839!1.67e-08!70;CL:0000557!3.25e-08!71;CL:0000055!5.57e-08!180;CL:0000057!1.80e-07!75;CL:0000219!9.64e-07!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.96e-18;33!CL:0002057;6.96e-18;33!CL:0000473;1.44e-14;39!CL:0000234;1.44e-14;39!CL:0002334;1.39e-07;12!CL:0000576;2.43e-07;48!CL:0000766;8.37e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,2.61e-19,427;CL:0000723,3.65e-19,433;CL:0000034,4.52e-18,441;CL:0000473,2.57e-15,48;CL:0000234,2.57e-15,48;CL:0000860,3.72e-15,42;CL:0002057,3.72e-15,42;CL:0002320,4.26e-13,361;CL:0000766,2.39e-12,72;CL:0000134,2.80e-12,354;CL:0002194,2.17e-10,59;CL:0000576,2.17e-10,59;CL:0000040,2.17e-10,59;CL:0000559,2.17e-10,59;CL:0002009,1.54e-09,61;CL:0000839,2.72e-09,66;CL:0000219,4.66e-09,386;CL:0000557,6.43e-09,67;CL:0000057,2.94e-08,76;CL:0002334,9.44e-08,12 | |||
|ontology_enrichment_development_v019=CL:0002057;1.38e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;1.82e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.02e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0002204!3.48e-11!167;UBERON:0002384!2.68e-09!375;UBERON:0002371!2.49e-07!80;UBERON:0004765!5.15e-07!101;UBERON:0001434!5.15e-07!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.39e-13,167;UBERON:0002384,3.43e-13,371;UBERON:0000926,2.11e-12,315;UBERON:0004120,2.11e-12,315;UBERON:0006603,2.11e-12,315;UBERON:0002371,4.59e-08,76;UBERON:0001434,5.60e-08,100;UBERON:0004765,1.17e-07,90;UBERON:0001474,9.15e-07,82 | |||
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| ||
|short_description=p4@HIF1A | |||
}} | }} |
Latest revision as of 23:31, 24 September 2015
Short description: | p4@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HIF1A_5end |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | 0bp_to_ENST00000555014_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 2.61e-19 | 427 |
somatic stem cell | 3.65e-19 | 433 |
stem cell | 4.52e-18 | 441 |
defensive cell | 2.57e-15 | 48 |
phagocyte | 2.57e-15 | 48 |
classical monocyte | 3.72e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.72e-15 | 42 |
connective tissue cell | 4.26e-13 | 361 |
myeloid leukocyte | 2.39e-12 | 72 |
mesenchymal cell | 2.80e-12 | 354 |
monopoietic cell | 2.17e-10 | 59 |
monocyte | 2.17e-10 | 59 |
monoblast | 2.17e-10 | 59 |
promonocyte | 2.17e-10 | 59 |
macrophage dendritic cell progenitor | 1.54e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.72e-09 | 66 |
motile cell | 4.66e-09 | 386 |
granulocyte monocyte progenitor cell | 6.43e-09 | 67 |
fibroblast | 2.94e-08 | 76 |
preadipocyte | 9.44e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.39e-13 | 167 |
connective tissue | 3.43e-13 | 371 |
mesoderm | 2.11e-12 | 315 |
mesoderm-derived structure | 2.11e-12 | 315 |
presumptive mesoderm | 2.11e-12 | 315 |
bone marrow | 4.59e-08 | 76 |
skeletal system | 5.60e-08 | 100 |
skeletal element | 1.17e-07 | 90 |
bone element | 9.15e-07 | 82 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.02e-07 | 14 |