FFCP PHASE1:Hg19::chr14:62187163..62187261,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:62187163..62187261,+ to FFCP PHASE1:Hg19::chr14:62187163..62187261,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr14:62187163..62187261,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_at_chr14:62187163..62187261,+ | |||
|id=chr14:62187163..62187261,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.37e-15!42;CL:0000860!3.34e-15!45;CL:0000766!3.14e-13!76;CL:0000048!2.64e-11!430;CL:0000034!6.21e-11!444;CL:0002194!6.51e-11!63;CL:0000576!6.51e-11!63;CL:0000040!6.51e-11!63;CL:0000559!6.51e-11!63;CL:0000557!1.04e-10!71;CL:0000723!1.24e-10!436;CL:0002009!1.52e-10!65;CL:0000839!6.23e-10!70;CL:0000012!1.35e-09!682;CL:0000548!2.35e-09!679;CL:0000004!2.35e-09!679;CL:0000255!2.35e-09!679;CL:0000055!4.41e-08!180;CL:0000057!7.24e-07!75 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.67e-19;33!CL:0002057;9.67e-19;33!CL:0000473;1.45e-15;39!CL:0000234;1.45e-15;39!CL:0000576;3.17e-09;48!CL:0000766;7.69e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.32e-17,42;CL:0002057,8.32e-17,42;CL:0000473,9.36e-17,48;CL:0000234,9.36e-17,48;CL:0000766,1.08e-13,72;CL:0000048,1.77e-12,427;CL:0002194,7.15e-12,59;CL:0000576,7.15e-12,59;CL:0000040,7.15e-12,59;CL:0000559,7.15e-12,59;CL:0000034,1.91e-11,441;CL:0000723,1.93e-11,433;CL:0002009,6.43e-11,61;CL:0000557,1.36e-10,67;CL:0000839,1.65e-10,66;CL:0002320,7.62e-08,361;CL:0000134,2.67e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.73e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!6.42e-13!167;UBERON:0002371!4.33e-11!80;UBERON:0001474!1.69e-09!86;UBERON:0004765!2.06e-08!101;UBERON:0001434!2.06e-08!101;UBERON:0002405!1.98e-07!115;UBERON:0002390!2.93e-07!102;UBERON:0003061!2.93e-07!102;UBERON:0002384!3.59e-07!375;UBERON:0002193!5.65e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,1.53e-13,167;UBERON:0002371,4.22e-11,76;UBERON:0004765,3.39e-10,90;UBERON:0001474,5.20e-10,82;UBERON:0000926,6.17e-10,315;UBERON:0004120,6.17e-10,315;UBERON:0006603,6.17e-10,315;UBERON:0001434,1.09e-08,100;UBERON:0002384,2.79e-08,371;UBERON:0002405,8.13e-08,93 | |||
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| ||
|short_description=p@chr14:62187163..62187261,+ | |||
}} | }} |
Latest revision as of 21:44, 24 July 2015
Short description: | p@chr14:62187163..62187261, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:62187163..62187261, + |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.32e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.32e-17 | 42 |
defensive cell | 9.36e-17 | 48 |
phagocyte | 9.36e-17 | 48 |
myeloid leukocyte | 1.08e-13 | 72 |
multi fate stem cell | 1.77e-12 | 427 |
monopoietic cell | 7.15e-12 | 59 |
monocyte | 7.15e-12 | 59 |
monoblast | 7.15e-12 | 59 |
promonocyte | 7.15e-12 | 59 |
stem cell | 1.91e-11 | 441 |
somatic stem cell | 1.93e-11 | 433 |
macrophage dendritic cell progenitor | 6.43e-11 | 61 |
granulocyte monocyte progenitor cell | 1.36e-10 | 67 |
myeloid lineage restricted progenitor cell | 1.65e-10 | 66 |
connective tissue cell | 7.62e-08 | 361 |
mesenchymal cell | 2.67e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 1.53e-13 | 167 |
bone marrow | 4.22e-11 | 76 |
skeletal element | 3.39e-10 | 90 |
bone element | 5.20e-10 | 82 |
mesoderm | 6.17e-10 | 315 |
mesoderm-derived structure | 6.17e-10 | 315 |
presumptive mesoderm | 6.17e-10 | 315 |
skeletal system | 1.09e-08 | 100 |
connective tissue | 2.79e-08 | 371 |
immune system | 8.13e-08 | 93 |