FFCP PHASE1:Hg19::chr14:61788321..61788324,+: Difference between revisions
From FANTOM5_SSTAR
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5583 | |EntrezGene=5583 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9403 | |HGNC=9403 | ||
|TSSclassifier=strong | |||
|UniProt=P24723 | |UniProt=P24723 | ||
|association_with_transcript=-110bp_to_ENST00000332981_5end | |||
|cluster_id=chr14:61788321..61788324,+ | |||
|description=CAGE_peak_23_at_PRKCH_5end | |||
|id=chr14:61788321..61788324,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.57e-10!24;CL:0000791!1.48e-09!18;CL:0000789!1.48e-09!18;CL:0002420!1.48e-09!18;CL:0002419!1.48e-09!18;CL:0000790!1.48e-09!18;CL:0005020!2.91e-07!6;CL:0002138!2.91e-07!6;CL:0005022!2.91e-07!6;CL:0000838!3.21e-07!52;CL:0000084!3.65e-07!25;CL:0000827!3.65e-07!25;CL:0000115!3.85e-07!35;CL:0000542!5.54e-07!53;CL:0000051!5.54e-07!53;CL:0000625!9.60e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.17e-23;18!CL:0000789;5.17e-23;18!CL:0002419;5.17e-23;18!CL:0002127;6.76e-18;1!CL:0000911;6.76e-18;1!CL:0000814;6.76e-18;1!CL:0000084;1.30e-16;25!CL:0000624;5.08e-12;6!CL:0000815;1.27e-09;2!CL:0000792;1.27e-09;2!CL:0000771;1.27e-09;2!CL:0002677;1.27e-09;2!CL:0000625;5.80e-07;11!CL:0000898;7.92e-07;3!CL:0000623;7.92e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.56e-23,18;CL:0000789,5.56e-23,18;CL:0002420,5.56e-23,18;CL:0002419,5.56e-23,18;CL:0000790,5.56e-23,18;CL:0002127,1.70e-17,1;CL:0000914,1.70e-17,1;CL:0000911,1.70e-17,1;CL:0000814,1.70e-17,1;CL:0002042,1.70e-17,1;CL:0002039,1.70e-17,1;CL:0002040,1.70e-17,1;CL:0002041,1.70e-17,1;CL:0000084,1.37e-16,25;CL:0000827,1.37e-16,25;CL:0000624,3.85e-12,6;CL:0000838,2.70e-11,52;CL:0000542,4.46e-11,53;CL:0000051,4.46e-11,53;CL:0000815,7.98e-10,2;CL:0000792,7.98e-10,2;CL:0002677,7.98e-10,2;CL:0000771,1.22e-09,2;CL:0000893,2.02e-09,2;CL:0002489,2.02e-09,2;CL:0000809,2.02e-09,2;CL:0000808,2.02e-09,2;CL:0000894,2.02e-09,2;CL:0000806,2.02e-09,2;CL:0000807,2.02e-09,2;CL:0000805,2.02e-09,2;CL:0002425,2.02e-09,2;CL:0000898,5.80e-07,3;CL:0000625,5.98e-07,11;CL:0000623,6.88e-07,3;CL:0000825,6.88e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;5.17e-23;18!CL:0002425;1.27e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.99e-18!115;UBERON:0002465!2.49e-07!10;UBERON:0004177!2.75e-07!7;UBERON:0002308!3.67e-07!9;UBERON:0000125!3.67e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;6.76e-18;1!UBERON:0005208;6.76e-18;1!UBERON:0004145;6.76e-18;1!UBERON:0005946;6.76e-18;1!UBERON:0005965;6.76e-18;1!UBERON:0002078;6.76e-18;1!UBERON:0002081;1.27e-09;2!UBERON:0002133;1.27e-09;2!UBERON:0003978;7.92e-07;3!UBERON:0004151;7.92e-07;3!UBERON:0000946;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,5.26e-18,1;UBERON:0005208,5.26e-18,1;UBERON:0005946,5.26e-18,1;UBERON:0005965,5.26e-18,1;UBERON:0002078,5.26e-18,1;UBERON:0002081,1.12e-09,2;UBERON:0002133,1.12e-09,2;UBERON:0010227,1.12e-09,2;UBERON:0003978,7.28e-07,3;UBERON:0009751,7.28e-07,3;UBERON:0004151,7.28e-07,3;UBERON:0000946,7.28e-07,3;UBERON:0002523,7.28e-07,3;UBERON:0005983,7.28e-07,3;UBERON:0004145,7.28e-07,3;UBERON:0002165,7.28e-07,3;UBERON:0002062,7.28e-07,3;UBERON:0007280,7.28e-07,3 | |||
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| ||
|short_description=p23@PRKCH | |||
}} | }} |
Latest revision as of 21:41, 24 September 2015
Short description: | p23@PRKCH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_PRKCH_5end |
Coexpression cluster: | NA |
Association with transcript: | -110bp_to_ENST00000332981_5end |
EntrezGene: | PRKCH |
HGNC: | 9403 |
UniProt: | P24723 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 5.26e-18 | 1 |
right atrium valve | 5.26e-18 | 1 |
outflow tract of atrium | 5.26e-18 | 1 |
outflow part of right atrium | 5.26e-18 | 1 |
right cardiac atrium | 5.26e-18 | 1 |
cardiac atrium | 1.12e-09 | 2 |
atrioventricular valve | 1.12e-09 | 2 |
future cardiac atrium | 1.12e-09 | 2 |
valve | 7.28e-07 | 3 |
cardiac mesenchyme | 7.28e-07 | 3 |
cardiac chamber | 7.28e-07 | 3 |
cardial valve | 7.28e-07 | 3 |
tunica intima | 7.28e-07 | 3 |
heart layer | 7.28e-07 | 3 |
outflow tract | 7.28e-07 | 3 |
endocardium | 7.28e-07 | 3 |
endocardial cushion | 7.28e-07 | 3 |
presumptive endocardium | 7.28e-07 | 3 |